RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 SMIM5Q71RC9 77 aa-0.87□□□□□ -2.55
HMGN3P1-201ENST00000453847 PLECQ15149 4684 aaKnown RBP-0.87□□□□□ -2.55
HMGN3P1-201ENST00000453847 LMO7Q8WWI1 1683 aa-0.88□□□□□ -2.55
HMGN3P1-201ENST00000453847 USP9YO00507 2555 aaPredicted RBP-0.88□□□□□ -2.55
HMGN3P1-201ENST00000453847 TLN2Q9Y4G6 2542 aa-0.88□□□□□ -2.55
HMGN3P1-201ENST00000453847 KIF21BO75037 1637 aa-0.89□□□□□ -2.55
HMGN3P1-201ENST00000453847 MT4P47944 62 aa-0.89□□□□□ -2.55
HMGN3P1-201ENST00000453847 KAAG1Q9UBP8 84 aa-0.9□□□□□ -2.55
HMGN3P1-201ENST00000453847 RYR1P21817 5038 aa-0.91□□□□□ -2.55
HMGN3P1-201ENST00000453847 EPPK1P58107 5090 aaKnown RBP-0.91□□□□□ -2.56
HMGN3P1-201ENST00000453847 CELSR3Q9NYQ7 3312 aa-0.92□□□□□ -2.56
HMGN3P1-201ENST00000453847 SYCP2Q9BX26 1530 aa-0.92□□□□□ -2.56
HMGN3P1-201ENST00000453847 SMR3BP02814 79 aaPredicted RBP-0.93□□□□□ -2.56
HMGN3P1-201ENST00000453847 NRXN3Q9Y4C0 1643 aa-0.93□□□□□ -2.56
HMGN3P1-201ENST00000453847 CMYA5Q8N3K9 4069 aa-0.94□□□□□ -2.56
HMGN3P1-201ENST00000453847 M0QY20 66 aa-0.94□□□□□ -2.56
HMGN3P1-201ENST00000453847 KRTAP8-1Q8IUC2 63 aa-0.94□□□□□ -2.56
HMGN3P1-201ENST00000453847 PREX2Q70Z35 1606 aa-0.95□□□□□ -2.56
HMGN3P1-201ENST00000453847 USP9XQ93008 2570 aaPredicted RBP-0.96□□□□□ -2.56
HMGN3P1-201ENST00000453847 ABRACLQ9P1F3 81 aa-0.96□□□□□ -2.56
HMGN3P1-201ENST00000453847 H0YGX0 51 aa-0.97□□□□□ -2.56
HMGN3P1-201ENST00000453847 MT1HP80294 61 aa-0.97□□□□□ -2.56
HMGN3P1-201ENST00000453847 C5orf42Q9H799 3197 aa-0.98□□□□□ -2.57
HMGN3P1-201ENST00000453847 ABCA5Q8WWZ7 1642 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 SMIM27A0A1W2PRY6 76 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 DEFB1P60022 68 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 CLPSL2Q6UWE3 100 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 WFDC10BQ8IUB3 73 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 FRYQ5TBA9 3013 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 LAMA3Q16787 3333 aa-0.99□□□□□ -2.57
HMGN3P1-201ENST00000453847 ADCY10Q96PN6 1610 aa-1□□□□□ -2.57
HMGN3P1-201ENST00000453847 COL6A5A8TX70 2615 aa-1.01□□□□□ -2.57
HMGN3P1-201ENST00000453847 IQGAP1P46940 1657 aa-1.01□□□□□ -2.57
HMGN3P1-201ENST00000453847 M0QZ58 72 aa-1.03□□□□□ -2.57
HMGN3P1-201ENST00000453847 DNAH10Q8IVF4 4471 aa-1.03□□□□□ -2.57
HMGN3P1-201ENST00000453847 DYNC1H1Q14204 4646 aaKnown RBP-1.04□□□□□ -2.58
HMGN3P1-201ENST00000453847 TEX15Q9BXT5 2789 aa-1.04□□□□□ -2.58
HMGN3P1-201ENST00000453847 A8MTW9 85 aa-1.04□□□□□ -2.58
HMGN3P1-201ENST00000453847 DNAH17Q9UFH2 4485 aa-1.04□□□□□ -2.58
HMGN3P1-201ENST00000453847 DNHD1Q96M86 4753 aa-1.04□□□□□ -2.58
HMGN3P1-201ENST00000453847 ITPR1Q14643 2758 aa-1.05□□□□□ -2.58
HMGN3P1-201ENST00000453847 PLNP26678 52 aa-1.06□□□□□ -2.58
HMGN3P1-201ENST00000453847 ABCC8Q09428 1581 aa-1.06□□□□□ -2.58
HMGN3P1-201ENST00000453847 TFF3Q07654 80 aa-1.07□□□□□ -2.58
HMGN3P1-201ENST00000453847 FANCD2Q9BXW9 1451 aa-1.07□□□□□ -2.58
HMGN3P1-201ENST00000453847 DDX60Q8IY21 1712 aaKnown RBP-1.08□□□□□ -2.58
HMGN3P1-201ENST00000453847 BIRC6Q9NR09 4857 aa-1.09□□□□□ -2.58
HMGN3P1-201ENST00000453847 RNF213Q63HN8 5207 aa-1.11□□□□□ -2.59
HMGN3P1-201ENST00000453847 MGAQ8IWI9 3026 aa-1.11□□□□□ -2.59
HMGN3P1-201ENST00000453847 SRCAPQ6ZRS2 3230 aa-1.11□□□□□ -2.59
HMGN3P1-201ENST00000453847 NFAT5O94916 1531 aa-1.12□□□□□ -2.59
HMGN3P1-201ENST00000453847 ADGRG4Q8IZF6 3080 aa-1.12□□□□□ -2.59
HMGN3P1-201ENST00000453847 CHD7Q9P2D1 2997 aa-1.14□□□□□ -2.59
HMGN3P1-201ENST00000453847 CSMD1Q96PZ7 3565 aa-1.14□□□□□ -2.59
HMGN3P1-201ENST00000453847 NEBP20929 6669 aa-1.16□□□□□ -2.6
HMGN3P1-201ENST00000453847 SPTAN1Q13813 2472 aaKnown RBP-1.16□□□□□ -2.6
HMGN3P1-201ENST00000453847 CMC2Q9NRP2 79 aa-1.17□□□□□ -2.6
HMGN3P1-201ENST00000453847 HYDINQ4G0P3 5121 aa-1.2□□□□□ -2.6
HMGN3P1-201ENST00000453847 LAMA2P24043 3122 aaKnown RBP-1.21□□□□□ -2.6
HMGN3P1-201ENST00000453847 DEFB131AP59861 70 aa-1.21□□□□□ -2.6
HMGN3P1-201ENST00000453847 MT1XP80297 61 aa-1.21□□□□□ -2.6
HMGN3P1-201ENST00000453847 LINC01546A6NGU7 62 aa-1.22□□□□□ -2.6
HMGN3P1-201ENST00000453847 MT1EP04732 61 aa-1.22□□□□□ -2.6
HMGN3P1-201ENST00000453847 SMIM2Q9BVW6 85 aa-1.23□□□□□ -2.61
HMGN3P1-201ENST00000453847 NIPBLQ6KC79 2804 aaeCLIP-1.23□□□□□ -2.61
HMGN3P1-201ENST00000453847 LRBAP50851 2863 aa-1.25□□□□□ -2.61
HMGN3P1-201ENST00000453847 TRRAPQ9Y4A5 3859 aa-1.25□□□□□ -2.61
HMGN3P1-201ENST00000453847 POLR2KP53803 58 aaKnown RBP-1.25□□□□□ -2.61
HMGN3P1-201ENST00000453847 CLTCL1P53675 1640 aa-1.26□□□□□ -2.61
HMGN3P1-201ENST00000453847 SPART-AS1P0CW21 52 aa-1.26□□□□□ -2.61
HMGN3P1-201ENST00000453847 ZFHX4Q86UP3 3567 aa-1.26□□□□□ -2.61
HMGN3P1-201ENST00000453847 DOPEY1Q5JWR5 2465 aa-1.28□□□□□ -2.61
HMGN3P1-201ENST00000453847 TRPM2O94759 1503 aa-1.3□□□□□ -2.62
HMGN3P1-201ENST00000453847 RYR2Q92736 4967 aa-1.3□□□□□ -2.62
HMGN3P1-201ENST00000453847 EYSQ5T1H1 3165 aa-1.3□□□□□ -2.62
HMGN3P1-201ENST00000453847 MYO9AB2RTY4 2548 aa-1.31□□□□□ -2.62
HMGN3P1-201ENST00000453847 MT1LQ93083 61 aa-1.31□□□□□ -2.62
HMGN3P1-201ENST00000453847 DNAH5Q8TE73 4624 aa-1.31□□□□□ -2.62
HMGN3P1-201ENST00000453847 CRYBG3Q68DQ2 2970 aa-1.32□□□□□ -2.62
HMGN3P1-201ENST00000453847 RYR3Q15413 4870 aa-1.36□□□□□ -2.63
HMGN3P1-201ENST00000453847 SNRPGP15A8MWD9 76 aa-1.37□□□□□ -2.63
HMGN3P1-201ENST00000453847 CFAP46Q8IYW2 2715 aa-1.38□□□□□ -2.63
HMGN3P1-201ENST00000453847 KIAA1109Q2LD37 5005 aa-1.4□□□□□ -2.63
HMGN3P1-201ENST00000453847 NDUFA1O15239 70 aa-1.4□□□□□ -2.63
HMGN3P1-201ENST00000453847 DMXL2Q8TDJ6 3036 aa-1.43□□□□□ -2.64
HMGN3P1-201ENST00000453847 LEAP2Q969E1 77 aa-1.45□□□□□ -2.64
HMGN3P1-201ENST00000453847 CSMD2Q7Z408 3487 aa-1.46□□□□□ -2.64
HMGN3P1-201ENST00000453847 MT1GP13640 62 aa-1.48□□□□□ -2.65
HMGN3P1-201ENST00000453847 SMG1Q96Q15 3661 aaKnown RBP-1.49□□□□□ -2.65
HMGN3P1-201ENST00000453847 IQGAP2Q13576 1575 aa-1.49□□□□□ -2.65
HMGN3P1-201ENST00000453847 CEP295Q9C0D2 2601 aa-1.49□□□□□ -2.65
HMGN3P1-201ENST00000453847 MT1HL1P0DM35 61 aa-1.56□□□□□ -2.66
HMGN3P1-201ENST00000453847 VPS13CQ709C8 3753 aa-1.57□□□□□ -2.66
HMGN3P1-201ENST00000453847 TLN1Q9Y490 2541 aaKnown RBP-1.59□□□□□ -2.66
HMGN3P1-201ENST00000453847 DEFB4AO15263 64 aa-1.59□□□□□ -2.66
HMGN3P1-201ENST00000453847 PRUNE2Q8WUY3 3088 aa-1.61□□□□□ -2.67
HMGN3P1-201ENST00000453847 MYO15AQ9UKN7 3530 aa-1.61□□□□□ -2.67
HMGN3P1-201ENST00000453847 DEFB136Q30KP8 78 aa-1.62□□□□□ -2.67
HMGN3P1-201ENST00000453847 MT1MQ8N339 61 aa-1.62□□□□□ -2.67
HMGN3P1-201ENST00000453847 CFAP54Q96N23 3096 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms