RNA–Protein interactions for RNA: ENST00000452508.6

ATM-203, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATM, Length 12,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-203ENST00000452508 VPS13DQ5THJ4 4388 aa1.67□□□□□ -2.14
ATM-203ENST00000452508 CRYBG3Q68DQ2 2970 aa1.67□□□□□ -2.14
ATM-203ENST00000452508 CRCT1Q9UGL9 99 aa1.67□□□□□ -2.14
ATM-203ENST00000452508 COL7A1Q02388 2944 aa1.66□□□□□ -2.14
ATM-203ENST00000452508 DNAH2Q9P225 4427 aa1.66□□□□□ -2.14
ATM-203ENST00000452508 KRTAP10-12P60413 245 aa1.65□□□□□ -2.15
ATM-203ENST00000452508 DNAH10Q8IVF4 4471 aa1.65□□□□□ -2.15
ATM-203ENST00000452508 KRTAP3-1Q9BYR8 98 aa1.65□□□□□ -2.15
ATM-203ENST00000452508 DYNC1H1Q14204 4646 aaKnown RBP1.64□□□□□ -2.15
ATM-203ENST00000452508 STARD9Q9P2P6 4700 aa1.64□□□□□ -2.15
ATM-203ENST00000452508 TRRAPQ9Y4A5 3859 aa1.63□□□□□ -2.15
ATM-203ENST00000452508 DNAH11Q96DT5 4516 aa1.63□□□□□ -2.15
ATM-203ENST00000452508 DNAH17Q9UFH2 4485 aa1.62□□□□□ -2.15
ATM-203ENST00000452508 LORP23490 312 aaPredicted RBP1.62□□□□□ -2.15
ATM-203ENST00000452508 PLECQ15149 4684 aaKnown RBP1.62□□□□□ -2.15
ATM-203ENST00000452508 DYNC2H1Q8NCM8 4307 aaKnown RBP1.62□□□□□ -2.15
ATM-203ENST00000452508 KRTAP10-6P60371 365 aaPredicted RBP1.61□□□□□ -2.15
ATM-203ENST00000452508 RYR3Q15413 4870 aa1.61□□□□□ -2.15
ATM-203ENST00000452508 DNAH3Q8TD57 4116 aa1.61□□□□□ -2.15
ATM-203ENST00000452508 KMT2CQ8NEZ4 4911 aaKnown RBP1.6□□□□□ -2.15
ATM-203ENST00000452508 DNAH6Q9C0G6 4158 aa1.6□□□□□ -2.15
ATM-203ENST00000452508 BIRC6Q9NR09 4857 aa1.6□□□□□ -2.15
ATM-203ENST00000452508 PRKDCP78527 4128 aaKnown RBP1.59□□□□□ -2.15
ATM-203ENST00000452508 LYSTQ99698 3801 aa1.59□□□□□ -2.16
ATM-203ENST00000452508 KRTAP8-1Q8IUC2 63 aa1.59□□□□□ -2.16
ATM-203ENST00000452508 LRP1BQ9NZR2 4599 aa1.58□□□□□ -2.16
ATM-203ENST00000452508 ALMS1Q8TCU4 4167 aa1.58□□□□□ -2.16
ATM-203ENST00000452508 DNAH8Q96JB1 4490 aa1.57□□□□□ -2.16
ATM-203ENST00000452508 DNAH5Q8TE73 4624 aa1.57□□□□□ -2.16
ATM-203ENST00000452508 HERC2O95714 4834 aa1.57□□□□□ -2.16
ATM-203ENST00000452508 FAT2Q9NYQ8 4349 aa1.57□□□□□ -2.16
ATM-203ENST00000452508 KRTAP4-1Q9BYQ7 146 aa1.57□□□□□ -2.16
ATM-203ENST00000452508 LCE2DQ5TA82 110 aaPredicted RBP1.57□□□□□ -2.16
ATM-203ENST00000452508 KRTAP3-3Q9BYR6 98 aa1.56□□□□□ -2.16
ATM-203ENST00000452508 LPAP08519 4548 aa1.56□□□□□ -2.16
ATM-203ENST00000452508 CMYA5Q8N3K9 4069 aa1.55□□□□□ -2.16
ATM-203ENST00000452508 HYDINQ4G0P3 5121 aa1.54□□□□□ -2.16
ATM-203ENST00000452508 KRTAP12-3P60328 96 aa1.54□□□□□ -2.16
ATM-203ENST00000452508 RYR2Q92736 4967 aa1.53□□□□□ -2.16
ATM-203ENST00000452508 APOBP04114 4563 aaKnown RBP1.53□□□□□ -2.17
ATM-203ENST00000452508 KRTAP10-7P60409 375 aaPredicted RBP1.52□□□□□ -2.17
ATM-203ENST00000452508 KRTAP3-2Q9BYR7 98 aa1.51□□□□□ -2.17
ATM-203ENST00000452508 MT1HP80294 61 aa1.51□□□□□ -2.17
ATM-203ENST00000452508 FAT1Q14517 4588 aa1.51□□□□□ -2.17
ATM-203ENST00000452508 VPS13BQ7Z7G8 4022 aa1.5□□□□□ -2.17
ATM-203ENST00000452508 HECTD4Q9Y4D8 3996 aa1.5□□□□□ -2.17
ATM-203ENST00000452508 DNAH7Q8WXX0 4024 aa1.49□□□□□ -2.17
ATM-203ENST00000452508 SPRR2GQ9BYE4 73 aa1.49□□□□□ -2.17
ATM-203ENST00000452508 FRAS1Q86XX4 4008 aa1.49□□□□□ -2.17
ATM-203ENST00000452508 FAT3Q8TDW7 4589 aa1.49□□□□□ -2.17
ATM-203ENST00000452508 KMT2AQ03164 3969 aa1.47□□□□□ -2.17
ATM-203ENST00000452508 EPPK1P58107 5090 aaKnown RBP1.47□□□□□ -2.17
ATM-203ENST00000452508 PKD1P98161 4303 aa1.47□□□□□ -2.17
ATM-203ENST00000452508 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
ATM-203ENST00000452508 SPRR5A0A1B0GTR4 108 aa1.47□□□□□ -2.17
ATM-203ENST00000452508 PKHD1P08F94 4074 aa1.46□□□□□ -2.18
ATM-203ENST00000452508 SPRR2FQ96RM1 72 aa1.45□□□□□ -2.18
ATM-203ENST00000452508 HSPG2P98160 4391 aa1.44□□□□□ -2.18
ATM-203ENST00000452508 MT2AP02795 61 aa1.44□□□□□ -2.18
ATM-203ENST00000452508 MT1FP04733 61 aa1.42□□□□□ -2.18
ATM-203ENST00000452508 LCE3AQ5TA76 89 aa1.42□□□□□ -2.18
ATM-203ENST00000452508 MYCBP2O75592 4640 aa1.41□□□□□ -2.18
ATM-203ENST00000452508 SPRR2EP22531 72 aa1.41□□□□□ -2.18
ATM-203ENST00000452508 SPRR2BP35325 72 aa1.41□□□□□ -2.18
ATM-203ENST00000452508 SPRR2AP35326 72 aa1.41□□□□□ -2.18
ATM-203ENST00000452508 KRTAP12-4P60329 112 aa1.41□□□□□ -2.18
ATM-203ENST00000452508 SPRR2DP22532 72 aa1.4□□□□□ -2.19
ATM-203ENST00000452508 LCE2BO14633 110 aa1.4□□□□□ -2.19
ATM-203ENST00000452508 PKHD1L1Q86WI1 4243 aa1.4□□□□□ -2.19
ATM-203ENST00000452508 LCE2CQ5TA81 110 aa1.4□□□□□ -2.19
ATM-203ENST00000452508 LRP1Q07954 4544 aaKnown RBP1.39□□□□□ -2.19
ATM-203ENST00000452508 MUC17Q685J3 4493 aa1.39□□□□□ -2.19
ATM-203ENST00000452508 HMCN2Q8NDA2 5059 aa1.39□□□□□ -2.19
ATM-203ENST00000452508 FLGP20930 4061 aaPredicted RBP1.38□□□□□ -2.19
ATM-203ENST00000452508 PCLOQ9Y6V0 5065 aa1.37□□□□□ -2.19
ATM-203ENST00000452508 ABCA13Q86UQ4 5058 aa1.37□□□□□ -2.19
ATM-203ENST00000452508 KRTAP10-5P60370 271 aa1.37□□□□□ -2.19
ATM-203ENST00000452508 KRTAP19-8Q3LI54 63 aa1.36□□□□□ -2.19
ATM-203ENST00000452508 LCE3CQ5T5A8 94 aa1.36□□□□□ -2.19
ATM-203ENST00000452508 KRTAP9-8Q9BYQ0 159 aa1.36□□□□□ -2.19
ATM-203ENST00000452508 KRTAP19-2Q3LHN2 52 aa1.35□□□□□ -2.19
ATM-203ENST00000452508 TNXBP22105 4242 aa1.35□□□□□ -2.19
ATM-203ENST00000452508 HERC1Q15751 4861 aa1.34□□□□□ -2.19
ATM-203ENST00000452508 KIAA1109Q2LD37 5005 aa1.33□□□□□ -2.2
ATM-203ENST00000452508 KRTAP19-1Q8IUB9 90 aa1.33□□□□□ -2.2
ATM-203ENST00000452508 LCE2AQ5TA79 106 aaPredicted RBP1.32□□□□□ -2.2
ATM-203ENST00000452508 NEBP20929 6669 aa1.32□□□□□ -2.2
ATM-203ENST00000452508 MT1GP13640 62 aa1.32□□□□□ -2.2
ATM-203ENST00000452508 MT1BP07438 61 aa1.3□□□□□ -2.2
ATM-203ENST00000452508 GPR98Q8WXG9 6306 aa1.3□□□□□ -2.2
ATM-203ENST00000452508 KRTAP9-3Q9BYQ3 159 aa1.3□□□□□ -2.2
ATM-203ENST00000452508 SYNE2Q8WXH0 6885 aaKnown RBP1.3□□□□□ -2.2
ATM-203ENST00000452508 KRTAP19-5Q3LI72 72 aa1.3□□□□□ -2.2
ATM-203ENST00000452508 KRTAP9-6A0A140TA67 174 aa1.28□□□□□ -2.2
ATM-203ENST00000452508 LRP2P98164 4655 aa1.28□□□□□ -2.2
ATM-203ENST00000452508 FAT4Q6V0I7 4981 aa1.28□□□□□ -2.2
ATM-203ENST00000452508 KRTAP9-2Q9BYQ4 174 aa1.28□□□□□ -2.2
ATM-203ENST00000452508 KRTAP19-6Q3LI70 58 aa1.27□□□□□ -2.21
ATM-203ENST00000452508 MT1XP80297 61 aa1.27□□□□□ -2.21
ATM-203ENST00000452508 MT1LQ93083 61 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms