RNA–Protein interactions for RNA: ENST00000451903.2

CPS1-204, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-204ENST00000451903 HYDINQ4G0P3 5121 aa2.55□□□□□ -2
CPS1-204ENST00000451903 KRTAP10-12P60413 245 aa2.55□□□□□ -2
CPS1-204ENST00000451903 KMT2CQ8NEZ4 4911 aaKnown RBP2.55□□□□□ -2
CPS1-204ENST00000451903 VWFP04275 2813 aa2.54□□□□□ -2
CPS1-204ENST00000451903 HECTD4Q9Y4D8 3996 aa2.54□□□□□ -2
CPS1-204ENST00000451903 FBN1P35555 2871 aaKnown RBP2.52□□□□□ -2.01
CPS1-204ENST00000451903 PCLOQ9Y6V0 5065 aa2.52□□□□□ -2.01
CPS1-204ENST00000451903 PRKDCP78527 4128 aaKnown RBP2.52□□□□□ -2.01
CPS1-204ENST00000451903 DNAH3Q8TD57 4116 aa2.51□□□□□ -2.01
CPS1-204ENST00000451903 KRTAP10-5P60370 271 aa2.5□□□□□ -2.01
CPS1-204ENST00000451903 RYR2Q92736 4967 aa2.49□□□□□ -2.01
CPS1-204ENST00000451903 LORP23490 312 aaPredicted RBP2.48□□□□□ -2.01
CPS1-204ENST00000451903 KMT2AQ03164 3969 aa2.46□□□□□ -2.02
CPS1-204ENST00000451903 DNAH1Q9P2D7 4330 aa2.45□□□□□ -2.02
CPS1-204ENST00000451903 EPPK1P58107 5090 aaKnown RBP2.44□□□□□ -2.02
CPS1-204ENST00000451903 DNAH7Q8WXX0 4024 aa2.42□□□□□ -2.02
CPS1-204ENST00000451903 CSMD3Q7Z407 3707 aa2.41□□□□□ -2.02
CPS1-204ENST00000451903 KRTAP8-1Q8IUC2 63 aa2.41□□□□□ -2.02
CPS1-204ENST00000451903 HUWE1Q7Z6Z7 4374 aaKnown RBP2.41□□□□□ -2.02
CPS1-204ENST00000451903 KRTAP4-5Q9BYR2 181 aa2.41□□□□□ -2.02
CPS1-204ENST00000451903 FRAS1Q86XX4 4008 aa2.41□□□□□ -2.02
CPS1-204ENST00000451903 DNAH6Q9C0G6 4158 aa2.4□□□□□ -2.02
CPS1-204ENST00000451903 DNAH9Q9NYC9 4486 aa2.4□□□□□ -2.02
CPS1-204ENST00000451903 MT1HL1P0DM35 61 aa2.39□□□□□ -2.03
CPS1-204ENST00000451903 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
CPS1-204ENST00000451903 MEGF8Q7Z7M0 2845 aa2.38□□□□□ -2.03
CPS1-204ENST00000451903 TRRAPQ9Y4A5 3859 aa2.38□□□□□ -2.03
CPS1-204ENST00000451903 KRTAP10-4P60372 401 aaPredicted RBP2.38□□□□□ -2.03
CPS1-204ENST00000451903 DYNC2H1Q8NCM8 4307 aaKnown RBP2.37□□□□□ -2.03
CPS1-204ENST00000451903 DNAH10Q8IVF4 4471 aa2.36□□□□□ -2.03
CPS1-204ENST00000451903 COL7A1Q02388 2944 aa2.36□□□□□ -2.03
CPS1-204ENST00000451903 DNAH11Q96DT5 4516 aa2.36□□□□□ -2.03
CPS1-204ENST00000451903 LCE3CQ5T5A8 94 aa2.35□□□□□ -2.03
CPS1-204ENST00000451903 LCE2CQ5TA81 110 aa2.35□□□□□ -2.03
CPS1-204ENST00000451903 DNAH2Q9P225 4427 aa2.34□□□□□ -2.04
CPS1-204ENST00000451903 PKHD1P08F94 4074 aa2.32□□□□□ -2.04
CPS1-204ENST00000451903 PLECQ15149 4684 aaKnown RBP2.31□□□□□ -2.04
CPS1-204ENST00000451903 VPS13DQ5THJ4 4388 aa2.31□□□□□ -2.04
CPS1-204ENST00000451903 HERC2O95714 4834 aa2.3□□□□□ -2.04
CPS1-204ENST00000451903 FAT3Q8TDW7 4589 aa2.3□□□□□ -2.04
CPS1-204ENST00000451903 DNAH17Q9UFH2 4485 aa2.3□□□□□ -2.04
CPS1-204ENST00000451903 LOC100996750A0A140TA64 210 aa2.29□□□□□ -2.04
CPS1-204ENST00000451903 KRTAP4-6Q9BYQ5 205 aa2.29□□□□□ -2.04
CPS1-204ENST00000451903 KRTAP9-6A0A140TA67 174 aa2.29□□□□□ -2.04
CPS1-204ENST00000451903 BIRC6Q9NR09 4857 aa2.28□□□□□ -2.04
CPS1-204ENST00000451903 SACSQ9NZJ4 4579 aa2.27□□□□□ -2.05
CPS1-204ENST00000451903 CRCT1Q9UGL9 99 aa2.27□□□□□ -2.05
CPS1-204ENST00000451903 LCE2DQ5TA82 110 aaPredicted RBP2.26□□□□□ -2.05
CPS1-204ENST00000451903 DNAH8Q96JB1 4490 aa2.25□□□□□ -2.05
CPS1-204ENST00000451903 DYNC1H1Q14204 4646 aaKnown RBP2.25□□□□□ -2.05
CPS1-204ENST00000451903 LRP1BQ9NZR2 4599 aa2.24□□□□□ -2.05
CPS1-204ENST00000451903 ABCA13Q86UQ4 5058 aa2.23□□□□□ -2.05
CPS1-204ENST00000451903 LCE2AQ5TA79 106 aaPredicted RBP2.23□□□□□ -2.05
CPS1-204ENST00000451903 RYR1P21817 5038 aa2.22□□□□□ -2.05
CPS1-204ENST00000451903 FAT2Q9NYQ8 4349 aa2.22□□□□□ -2.05
CPS1-204ENST00000451903 KRTAP9-2Q9BYQ4 174 aa2.2□□□□□ -2.06
CPS1-204ENST00000451903 DNAH5Q8TE73 4624 aa2.19□□□□□ -2.06
CPS1-204ENST00000451903 STARD9Q9P2P6 4700 aa2.18□□□□□ -2.06
CPS1-204ENST00000451903 PKHD1L1Q86WI1 4243 aa2.17□□□□□ -2.06
CPS1-204ENST00000451903 LCE2BO14633 110 aa2.16□□□□□ -2.06
CPS1-204ENST00000451903 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
CPS1-204ENST00000451903 SPRR2FQ96RM1 72 aa2.15□□□□□ -2.07
CPS1-204ENST00000451903 PRM1P04553 51 aa2.14□□□□□ -2.07
CPS1-204ENST00000451903 SPRR2GQ9BYE4 73 aa2.14□□□□□ -2.07
CPS1-204ENST00000451903 KRTAP19-5Q3LI72 72 aa2.13□□□□□ -2.07
CPS1-204ENST00000451903 UBR4Q5T4S7 5183 aa2.13□□□□□ -2.07
CPS1-204ENST00000451903 SPRR2EP22531 72 aa2.12□□□□□ -2.07
CPS1-204ENST00000451903 SPRR2BP35325 72 aa2.12□□□□□ -2.07
CPS1-204ENST00000451903 SPRR2AP35326 72 aa2.12□□□□□ -2.07
CPS1-204ENST00000451903 KIAA1109Q2LD37 5005 aa2.12□□□□□ -2.07
CPS1-204ENST00000451903 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
CPS1-204ENST00000451903 PKD1P98161 4303 aa2.11□□□□□ -2.07
CPS1-204ENST00000451903 APOBP04114 4563 aaKnown RBP2.11□□□□□ -2.07
CPS1-204ENST00000451903 MT1HP80294 61 aa2.11□□□□□ -2.07
CPS1-204ENST00000451903 KRTAP10-7P60409 375 aaPredicted RBP2.11□□□□□ -2.07
CPS1-204ENST00000451903 HERC1Q15751 4861 aa2.1□□□□□ -2.07
CPS1-204ENST00000451903 HSPG2P98160 4391 aa2.09□□□□□ -2.07
CPS1-204ENST00000451903 KRTAP9-7A8MTY7 169 aa2.09□□□□□ -2.08
CPS1-204ENST00000451903 SPRR2DP22532 72 aa2.09□□□□□ -2.08
CPS1-204ENST00000451903 VPS13BQ7Z7G8 4022 aa2.09□□□□□ -2.08
CPS1-204ENST00000451903 MUC2Q02817 5179 aa2.08□□□□□ -2.08
CPS1-204ENST00000451903 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
CPS1-204ENST00000451903 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
CPS1-204ENST00000451903 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
CPS1-204ENST00000451903 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
CPS1-204ENST00000451903 FAT1Q14517 4588 aa2.06□□□□□ -2.08
CPS1-204ENST00000451903 MYCBP2O75592 4640 aa2.05□□□□□ -2.08
CPS1-204ENST00000451903 LCE1AQ5T7P2 110 aa2.02□□□□□ -2.09
CPS1-204ENST00000451903 MT2AP02795 61 aa2.02□□□□□ -2.09
CPS1-204ENST00000451903 KRTAP4-1Q9BYQ7 146 aa2.02□□□□□ -2.09
CPS1-204ENST00000451903 FAT4Q6V0I7 4981 aa2.01□□□□□ -2.09
CPS1-204ENST00000451903 KRTAP2-2Q9BYT5 123 aa2□□□□□ -2.09
CPS1-204ENST00000451903 LCE3BQ5TA77 95 aa2□□□□□ -2.09
CPS1-204ENST00000451903 KRTAP19-8Q3LI54 63 aa1.97□□□□□ -2.09
CPS1-204ENST00000451903 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
CPS1-204ENST00000451903 MUC17Q685J3 4493 aa1.97□□□□□ -2.09
CPS1-204ENST00000451903 LRP1Q07954 4544 aaKnown RBP1.97□□□□□ -2.09
CPS1-204ENST00000451903 KRTAP19-1Q8IUB9 90 aa1.96□□□□□ -2.1
CPS1-204ENST00000451903 HMCN2Q8NDA2 5059 aa1.95□□□□□ -2.1
CPS1-204ENST00000451903 LCE5AQ5TCM9 118 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms