RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
CPSF7-207ENST00000449811 A0A087WVE0 104 aa5.59□□□□□ -1.51
CPSF7-207ENST00000449811 NAA38Q9BRA0 125 aaKnown RBP5.57□□□□□ -1.52
CPSF7-207ENST00000449811 UQCR10Q9UDW1 63 aa5.57□□□□□ -1.52
CPSF7-207ENST00000449811 H0YAA0 97 aa5.56□□□□□ -1.52
CPSF7-207ENST00000449811 PYY3Q5JQD4 70 aa5.52□□□□□ -1.53
CPSF7-207ENST00000449811 ADM2Q7Z4H4 148 aa5.51□□□□□ -1.53
CPSF7-207ENST00000449811 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
CPSF7-207ENST00000449811 NDUFC1O43677 76 aa5.49□□□□□ -1.53
CPSF7-207ENST00000449811 KRTAP10-7P60409 375 aaPredicted RBP5.48□□□□□ -1.53
CPSF7-207ENST00000449811 CYP4F30PQ9H0H9 118 aa5.46□□□□□ -1.54
CPSF7-207ENST00000449811 TP53AIP1Q9HCN2 124 aa5.46□□□□□ -1.54
CPSF7-207ENST00000449811 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
CPSF7-207ENST00000449811 TSTD3H0UI37 97 aa5.42□□□□□ -1.54
CPSF7-207ENST00000449811 H3BT86 120 aa5.42□□□□□ -1.54
CPSF7-207ENST00000449811 R4GN34 69 aa5.41□□□□□ -1.54
CPSF7-207ENST00000449811 M0R143 59 aa5.4□□□□□ -1.54
CPSF7-207ENST00000449811 K7EP34 96 aa5.39□□□□□ -1.55
CPSF7-207ENST00000449811 HMCN1Q96RW7 5635 aa5.37□□□□□ -1.55
CPSF7-207ENST00000449811 M0QZ58 72 aa5.35□□□□□ -1.55
CPSF7-207ENST00000449811 UBL5Q9BZL1 73 aa5.35□□□□□ -1.55
CPSF7-207ENST00000449811 AHNAK2Q8IVF2 5795 aa5.34□□□□□ -1.55
CPSF7-207ENST00000449811 LOC101927531A0A1B0GV80 90 aa5.33□□□□□ -1.56
CPSF7-207ENST00000449811 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
CPSF7-207ENST00000449811 P0C880 135 aa5.31□□□□□ -1.56
CPSF7-207ENST00000449811 LINC01554Q52M75 96 aa5.31□□□□□ -1.56
CPSF7-207ENST00000449811 TRAV22A0A0B4J277 110 aa5.3□□□□□ -1.56
CPSF7-207ENST00000449811 ACYP1P07311 99 aa5.29□□□□□ -1.56
CPSF7-207ENST00000449811 C20orf197Q8N268 126 aa5.29□□□□□ -1.56
CPSF7-207ENST00000449811 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
CPSF7-207ENST00000449811 KRTAP3-2Q9BYR7 98 aa5.26□□□□□ -1.57
CPSF7-207ENST00000449811 SPCS1Q9Y6A9 102 aa5.22□□□□□ -1.57
CPSF7-207ENST00000449811 A0A1W2PPM0 123 aa5.21□□□□□ -1.58
CPSF7-207ENST00000449811 C9orf118A6NHY6 69 aa5.2□□□□□ -1.58
CPSF7-207ENST00000449811 MT4P47944 62 aa5.2□□□□□ -1.58
CPSF7-207ENST00000449811 BATFQ16520 125 aa5.2□□□□□ -1.58
CPSF7-207ENST00000449811 KRTAP5-10Q6L8G5 202 aa5.19□□□□□ -1.58
CPSF7-207ENST00000449811 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
CPSF7-207ENST00000449811 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
CPSF7-207ENST00000449811 H0Y9P7 68 aa5.14□□□□□ -1.59
CPSF7-207ENST00000449811 ATOX1O00244 68 aa5.14□□□□□ -1.59
CPSF7-207ENST00000449811 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
CPSF7-207ENST00000449811 TAX1BP3O14907 124 aa5.13□□□□□ -1.59
CPSF7-207ENST00000449811 MT1EP04732 61 aa5.12□□□□□ -1.59
CPSF7-207ENST00000449811 CYSTM1Q9H1C7 97 aa5.12□□□□□ -1.59
CPSF7-207ENST00000449811 UQCRQO14949 82 aa5.1□□□□□ -1.59
CPSF7-207ENST00000449811 MT-ATP8P03928 68 aa5.09□□□□□ -1.59
CPSF7-207ENST00000449811 TMA7Q9Y2S6 64 aaKnown RBP5.08□□□□□ -1.6
CPSF7-207ENST00000449811 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
CPSF7-207ENST00000449811 PRO0461Q9UI25 63 aa5.04□□□□□ -1.6
CPSF7-207ENST00000449811 LINC00208Q96KT6 92 aa5.01□□□□□ -1.61
CPSF7-207ENST00000449811 MT1GP13640 62 aa5□□□□□ -1.61
CPSF7-207ENST00000449811 PP632Q6XCG6 107 aa4.98□□□□□ -1.61
CPSF7-207ENST00000449811 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
CPSF7-207ENST00000449811 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
CPSF7-207ENST00000449811 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
CPSF7-207ENST00000449811 HIST1H4AP62805 103 aaKnown RBP4.94□□□□□ -1.62
CPSF7-207ENST00000449811 SMIM6P0DI80 62 aa4.93□□□□□ -1.62
CPSF7-207ENST00000449811 DMAC1Q96GE9 116 aa4.93□□□□□ -1.62
CPSF7-207ENST00000449811 MT1MQ8N339 61 aa4.92□□□□□ -1.62
CPSF7-207ENST00000449811 MP68P56378 58 aa4.91□□□□□ -1.62
CPSF7-207ENST00000449811 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.63
CPSF7-207ENST00000449811 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
CPSF7-207ENST00000449811 KRTAP19-5Q3LI72 72 aa4.88□□□□□ -1.63
CPSF7-207ENST00000449811 ATP5EP2Q5VTU8 51 aa4.87□□□□□ -1.63
CPSF7-207ENST00000449811 ETDBQ3ZM63 59 aa4.86□□□□□ -1.63
CPSF7-207ENST00000449811 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
CPSF7-207ENST00000449811 TRAV7A0A075B6U4 112 aa4.81□□□□□ -1.64
CPSF7-207ENST00000449811 A0A0D9SG42 100 aa4.81□□□□□ -1.64
CPSF7-207ENST00000449811 MT1LQ93083 61 aa4.81□□□□□ -1.64
CPSF7-207ENST00000449811 OCR1Q9BZK8 76 aa4.81□□□□□ -1.64
CPSF7-207ENST00000449811 F8W1H4 67 aa4.79□□□□□ -1.64
CPSF7-207ENST00000449811 COL5A1-AS1Q5SY13 56 aa4.77□□□□□ -1.65
CPSF7-207ENST00000449811 SPTSSBQ8NFR3 76 aa4.76□□□□□ -1.65
CPSF7-207ENST00000449811 H3BPC8 53 aa4.75□□□□□ -1.65
CPSF7-207ENST00000449811 KRTAP13-4Q3LI77 160 aa4.75□□□□□ -1.65
CPSF7-207ENST00000449811 GTF2H5Q6ZYL4 71 aa4.75□□□□□ -1.65
CPSF7-207ENST00000449811 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
CPSF7-207ENST00000449811 FAM240AA0A1B0GVK7 77 aa4.72□□□□□ -1.65
CPSF7-207ENST00000449811 ACYP2P14621 99 aa4.71□□□□□ -1.66
CPSF7-207ENST00000449811 CHKB-CPT1BH3BT56 60 aa4.64□□□□□ -1.67
CPSF7-207ENST00000449811 LINC00643Q86TS7 51 aa4.64□□□□□ -1.67
CPSF7-207ENST00000449811 C10orf95Q9H7T3 257 aa4.59□□□□□ -1.67
CPSF7-207ENST00000449811 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
CPSF7-207ENST00000449811 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
CPSF7-207ENST00000449811 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
CPSF7-207ENST00000449811 KRTAP4-7Q9BYR0 210 aa4.55□□□□□ -1.68
CPSF7-207ENST00000449811 SPINT4Q6UDR6 99 aa4.54□□□□□ -1.68
CPSF7-207ENST00000449811 AHNAKQ09666 5890 aaKnown RBP4.54□□□□□ -1.68
CPSF7-207ENST00000449811 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
CPSF7-207ENST00000449811 LOC105371267A0A1B0GV96 52 aa4.51□□□□□ -1.69
CPSF7-207ENST00000449811 SCGB1A1P11684 91 aa4.51□□□□□ -1.69
CPSF7-207ENST00000449811 MUC5ACP98088 5654 aa4.46□□□□□ -1.69
CPSF7-207ENST00000449811 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
CPSF7-207ENST00000449811 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
CPSF7-207ENST00000449811 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
CPSF7-207ENST00000449811 SPATA8Q6RVD6 105 aa4.44□□□□□ -1.7
CPSF7-207ENST00000449811 TNP1P09430 55 aa4.38□□□□□ -1.71
CPSF7-207ENST00000449811 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
CPSF7-207ENST00000449811 SEC61GP60059 68 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms