RNA–Protein interactions for RNA: ENST00000448892.1

LINC00884-202, long intergenic non-protein coding RNA 884, humanhuman

TSL 5 BASIC

Gene LINC00884, Length 2,680 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00884-202ENST00000448892 PKHD1P08F94 4074 aa8.1□□□□□ -1.11
LINC00884-202ENST00000448892 PKHD1L1Q86WI1 4243 aa8.06□□□□□ -1.12
LINC00884-202ENST00000448892 S4R3F8 94 aa8.03□□□□□ -1.12
LINC00884-202ENST00000448892 KRTAP12-2P59991 146 aa8.02□□□□□ -1.13
LINC00884-202ENST00000448892 FAT1Q14517 4588 aa7.99□□□□□ -1.13
LINC00884-202ENST00000448892 SMR3BP02814 79 aaPredicted RBP7.98□□□□□ -1.13
LINC00884-202ENST00000448892 DYNC1H1Q14204 4646 aaKnown RBP7.93□□□□□ -1.14
LINC00884-202ENST00000448892 APOBP04114 4563 aaKnown RBP7.92□□□□□ -1.14
LINC00884-202ENST00000448892 HSPG2P98160 4391 aa7.91□□□□□ -1.14
LINC00884-202ENST00000448892 KRTAP10-8P60410 259 aa7.9□□□□□ -1.15
LINC00884-202ENST00000448892 KRTAP12-1P59990 96 aa7.89□□□□□ -1.15
LINC00884-202ENST00000448892 XP32Q5T750 250 aa7.85□□□□□ -1.15
LINC00884-202ENST00000448892 DNHD1Q96M86 4753 aa7.82□□□□□ -1.16
LINC00884-202ENST00000448892 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
LINC00884-202ENST00000448892 FAT3Q8TDW7 4589 aa7.81□□□□□ -1.16
LINC00884-202ENST00000448892 MYCBP2O75592 4640 aa7.78□□□□□ -1.16
LINC00884-202ENST00000448892 KRTAP10-4P60372 401 aaPredicted RBP7.77□□□□□ -1.16
LINC00884-202ENST00000448892 A0A0A0MQY5 61 aa7.71□□□□□ -1.18
LINC00884-202ENST00000448892 TNXBP22105 4242 aa7.69□□□□□ -1.18
LINC00884-202ENST00000448892 M0QZ58 72 aa7.62□□□□□ -1.19
LINC00884-202ENST00000448892 LPAP08519 4548 aa7.6□□□□□ -1.19
LINC00884-202ENST00000448892 PLAC4Q8WY50 150 aa7.57□□□□□ -1.2
LINC00884-202ENST00000448892 LUZP6Q538Z0 58 aa7.56□□□□□ -1.2
LINC00884-202ENST00000448892 A0A1B0GVY2 172 aa7.47□□□□□ -1.21
LINC00884-202ENST00000448892 KMT2CQ8NEZ4 4911 aaKnown RBP7.45□□□□□ -1.22
LINC00884-202ENST00000448892 LRP2P98164 4655 aa7.42□□□□□ -1.22
LINC00884-202ENST00000448892 R4GN34 69 aa7.4□□□□□ -1.23
LINC00884-202ENST00000448892 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
LINC00884-202ENST00000448892 J3QL48 77 aa7.24□□□□□ -1.25
LINC00884-202ENST00000448892 Q5VSD8 79 aa7.23□□□□□ -1.25
LINC00884-202ENST00000448892 RYR2Q92736 4967 aa7.21□□□□□ -1.25
LINC00884-202ENST00000448892 PP632Q6XCG6 107 aa7.17□□□□□ -1.26
LINC00884-202ENST00000448892 MT1HL1P0DM35 61 aa7.14□□□□□ -1.27
LINC00884-202ENST00000448892 KRTAP17-1Q9BYP8 105 aa7.12□□□□□ -1.27
LINC00884-202ENST00000448892 CAMK2N1Q7Z7J9 78 aa7.09□□□□□ -1.27
LINC00884-202ENST00000448892 RYR1P21817 5038 aa7.07□□□□□ -1.28
LINC00884-202ENST00000448892 MUC17Q685J3 4493 aa7.01□□□□□ -1.29
LINC00884-202ENST00000448892 ABCA13Q86UQ4 5058 aa6.98□□□□□ -1.29
LINC00884-202ENST00000448892 KIAA1109Q2LD37 5005 aa6.97□□□□□ -1.29
LINC00884-202ENST00000448892 SPRR5A0A1B0GTR4 108 aa6.94□□□□□ -1.3
LINC00884-202ENST00000448892 RYR3Q15413 4870 aa6.92□□□□□ -1.3
LINC00884-202ENST00000448892 KRTAP4-1Q9BYQ7 146 aa6.86□□□□□ -1.31
LINC00884-202ENST00000448892 TNP1P09430 55 aa6.85□□□□□ -1.31
LINC00884-202ENST00000448892 SEC61BP60468 96 aaKnown RBP6.78□□□□□ -1.32
LINC00884-202ENST00000448892 KRTAP19-2Q3LHN2 52 aa6.76□□□□□ -1.33
LINC00884-202ENST00000448892 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
LINC00884-202ENST00000448892 MUC2Q02817 5179 aa6.68□□□□□ -1.34
LINC00884-202ENST00000448892 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.35
LINC00884-202ENST00000448892 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
LINC00884-202ENST00000448892 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
LINC00884-202ENST00000448892 EPPK1P58107 5090 aaKnown RBP6.55□□□□□ -1.36
LINC00884-202ENST00000448892 PCLOQ9Y6V0 5065 aa6.52□□□□□ -1.37
LINC00884-202ENST00000448892 HERC1Q15751 4861 aa6.52□□□□□ -1.37
LINC00884-202ENST00000448892 KRTAP21-3Q3LHN1 58 aa6.5□□□□□ -1.37
LINC00884-202ENST00000448892 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
LINC00884-202ENST00000448892 INE1O15225 51 aa6.45□□□□□ -1.38
LINC00884-202ENST00000448892 LCE2DQ5TA82 110 aaPredicted RBP6.43□□□□□ -1.38
LINC00884-202ENST00000448892 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
LINC00884-202ENST00000448892 SPRR2GQ9BYE4 73 aa6.32□□□□□ -1.4
LINC00884-202ENST00000448892 FAT4Q6V0I7 4981 aa6.32□□□□□ -1.4
LINC00884-202ENST00000448892 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
LINC00884-202ENST00000448892 BIRC6Q9NR09 4857 aa6.25□□□□□ -1.41
LINC00884-202ENST00000448892 HERC2O95714 4834 aa6.25□□□□□ -1.41
LINC00884-202ENST00000448892 LCE2CQ5TA81 110 aa6.14□□□□□ -1.43
LINC00884-202ENST00000448892 KRTAP12-3P60328 96 aa6.13□□□□□ -1.43
LINC00884-202ENST00000448892 KRTAP10-12P60413 245 aa6.12□□□□□ -1.43
LINC00884-202ENST00000448892 HMCN2Q8NDA2 5059 aa6.12□□□□□ -1.43
LINC00884-202ENST00000448892 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
LINC00884-202ENST00000448892 M0R2T5 61 aa6.04□□□□□ -1.44
LINC00884-202ENST00000448892 MT1FP04733 61 aa6.02□□□□□ -1.44
LINC00884-202ENST00000448892 KRTAP10-5P60370 271 aa6.02□□□□□ -1.44
LINC00884-202ENST00000448892 KRTAP10-10P60014 251 aa6.01□□□□□ -1.45
LINC00884-202ENST00000448892 MT1XP80297 61 aa6□□□□□ -1.45
LINC00884-202ENST00000448892 MT2AP02795 61 aa5.97□□□□□ -1.45
LINC00884-202ENST00000448892 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
LINC00884-202ENST00000448892 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
LINC00884-202ENST00000448892 MT1BP07438 61 aa5.92□□□□□ -1.46
LINC00884-202ENST00000448892 MT1HP80294 61 aa5.92□□□□□ -1.46
LINC00884-202ENST00000448892 RNF213Q63HN8 5207 aa5.9□□□□□ -1.47
LINC00884-202ENST00000448892 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
LINC00884-202ENST00000448892 LCE3CQ5T5A8 94 aa5.79□□□□□ -1.48
LINC00884-202ENST00000448892 KRTAP19-5Q3LI72 72 aa5.74□□□□□ -1.49
LINC00884-202ENST00000448892 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
LINC00884-202ENST00000448892 KMT2DO14686 5537 aa5.69□□□□□ -1.5
LINC00884-202ENST00000448892 LCE2BO14633 110 aa5.69□□□□□ -1.5
LINC00884-202ENST00000448892 LCE2AQ5TA79 106 aaPredicted RBP5.66□□□□□ -1.5
LINC00884-202ENST00000448892 KRTAP2-3P0C7H8 128 aa5.6□□□□□ -1.51
LINC00884-202ENST00000448892 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
LINC00884-202ENST00000448892 KRTAP2-1Q9BYU5 128 aa5.6□□□□□ -1.51
LINC00884-202ENST00000448892 KRTAP9-3Q9BYQ3 159 aa5.59□□□□□ -1.52
LINC00884-202ENST00000448892 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
LINC00884-202ENST00000448892 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
LINC00884-202ENST00000448892 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
LINC00884-202ENST00000448892 USH2AO75445 5202 aa5.48□□□□□ -1.53
LINC00884-202ENST00000448892 KRTAP19-7Q3SYF9 63 aa5.35□□□□□ -1.55
LINC00884-202ENST00000448892 MT1LQ93083 61 aa5.21□□□□□ -1.58
LINC00884-202ENST00000448892 MT1EP04732 61 aa5.13□□□□□ -1.59
LINC00884-202ENST00000448892 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
LINC00884-202ENST00000448892 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
LINC00884-202ENST00000448892 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms