RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 MAP1AP78559 2803 aaPredicted RBP3.05□□□□□ -1.92
PCDH15-219ENST00000448885 BIRC6Q9NR09 4857 aa3.04□□□□□ -1.92
PCDH15-219ENST00000448885 DMBT1Q9UGM3 2413 aaPredicted RBP3.04□□□□□ -1.92
PCDH15-219ENST00000448885 FAT2Q9NYQ8 4349 aa3.04□□□□□ -1.92
PCDH15-219ENST00000448885 FBN1P35555 2871 aaKnown RBP3.03□□□□□ -1.92
PCDH15-219ENST00000448885 TEX15Q9BXT5 2789 aa3.03□□□□□ -1.92
PCDH15-219ENST00000448885 KRTAP15-1Q3LI76 137 aa3.02□□□□□ -1.93
PCDH15-219ENST00000448885 HUWE1Q7Z6Z7 4374 aaKnown RBP3.01□□□□□ -1.93
PCDH15-219ENST00000448885 ALMS1Q8TCU4 4167 aa3□□□□□ -1.93
PCDH15-219ENST00000448885 ABCA13Q86UQ4 5058 aa3□□□□□ -1.93
PCDH15-219ENST00000448885 DNAH8Q96JB1 4490 aa2.98□□□□□ -1.93
PCDH15-219ENST00000448885 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
PCDH15-219ENST00000448885 STAB2Q8WWQ8 2551 aa2.97□□□□□ -1.93
PCDH15-219ENST00000448885 FLG2Q5D862 2391 aaPredicted RBP2.97□□□□□ -1.93
PCDH15-219ENST00000448885 HECTD4Q9Y4D8 3996 aa2.97□□□□□ -1.93
PCDH15-219ENST00000448885 EPPK1P58107 5090 aaKnown RBP2.95□□□□□ -1.94
PCDH15-219ENST00000448885 FAT3Q8TDW7 4589 aa2.95□□□□□ -1.94
PCDH15-219ENST00000448885 PKD1P98161 4303 aa2.95□□□□□ -1.94
PCDH15-219ENST00000448885 HMCN2Q8NDA2 5059 aa2.94□□□□□ -1.94
PCDH15-219ENST00000448885 SACSQ9NZJ4 4579 aa2.94□□□□□ -1.94
PCDH15-219ENST00000448885 STARD9Q9P2P6 4700 aa2.94□□□□□ -1.94
PCDH15-219ENST00000448885 DNAH10Q8IVF4 4471 aa2.93□□□□□ -1.94
PCDH15-219ENST00000448885 DNAH2Q9P225 4427 aa2.93□□□□□ -1.94
PCDH15-219ENST00000448885 DYNC1H1Q14204 4646 aaKnown RBP2.93□□□□□ -1.94
PCDH15-219ENST00000448885 KIAA1109Q2LD37 5005 aa2.92□□□□□ -1.94
PCDH15-219ENST00000448885 INE1O15225 51 aa2.92□□□□□ -1.94
PCDH15-219ENST00000448885 PKHD1P08F94 4074 aa2.91□□□□□ -1.94
PCDH15-219ENST00000448885 PKHD1L1Q86WI1 4243 aa2.9□□□□□ -1.94
PCDH15-219ENST00000448885 VPS13BQ7Z7G8 4022 aa2.9□□□□□ -1.95
PCDH15-219ENST00000448885 KRTAP3-1Q9BYR8 98 aa2.86□□□□□ -1.95
PCDH15-219ENST00000448885 TENM3Q9P273 2699 aa2.85□□□□□ -1.95
PCDH15-219ENST00000448885 LRP1BQ9NZR2 4599 aa2.85□□□□□ -1.95
PCDH15-219ENST00000448885 DNAH5Q8TE73 4624 aa2.85□□□□□ -1.95
PCDH15-219ENST00000448885 KRTAP10-12P60413 245 aa2.83□□□□□ -1.96
PCDH15-219ENST00000448885 CRCT1Q9UGL9 99 aa2.83□□□□□ -1.96
PCDH15-219ENST00000448885 KRTAP10-6P60371 365 aaPredicted RBP2.8□□□□□ -1.96
PCDH15-219ENST00000448885 APOBP04114 4563 aaKnown RBP2.79□□□□□ -1.96
PCDH15-219ENST00000448885 FAT1Q14517 4588 aa2.77□□□□□ -1.97
PCDH15-219ENST00000448885 TENM2Q9NT68 2774 aa2.77□□□□□ -1.97
PCDH15-219ENST00000448885 KRTAP23-1A1A580 65 aa2.73□□□□□ -1.97
PCDH15-219ENST00000448885 UBR4Q5T4S7 5183 aa2.73□□□□□ -1.97
PCDH15-219ENST00000448885 MYCBP2O75592 4640 aa2.72□□□□□ -1.97
PCDH15-219ENST00000448885 KRTAP12-3P60328 96 aa2.72□□□□□ -1.97
PCDH15-219ENST00000448885 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
PCDH15-219ENST00000448885 KRTAP3-2Q9BYR7 98 aa2.68□□□□□ -1.98
PCDH15-219ENST00000448885 HSPG2P98160 4391 aa2.68□□□□□ -1.98
PCDH15-219ENST00000448885 TGP01266 2768 aa2.68□□□□□ -1.98
PCDH15-219ENST00000448885 MT1HL1P0DM35 61 aa2.67□□□□□ -1.98
PCDH15-219ENST00000448885 KRTAP3-3Q9BYR6 98 aa2.67□□□□□ -1.98
PCDH15-219ENST00000448885 TNXBP22105 4242 aa2.67□□□□□ -1.98
PCDH15-219ENST00000448885 HERC1Q15751 4861 aa2.64□□□□□ -1.99
PCDH15-219ENST00000448885 RNF213Q63HN8 5207 aa2.63□□□□□ -1.99
PCDH15-219ENST00000448885 NBEAL2Q6ZNJ1 2754 aa2.63□□□□□ -1.99
PCDH15-219ENST00000448885 KRTAP10-5P60370 271 aa2.62□□□□□ -1.99
PCDH15-219ENST00000448885 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
PCDH15-219ENST00000448885 FAT4Q6V0I7 4981 aa2.58□□□□□ -2
PCDH15-219ENST00000448885 LRP2P98164 4655 aa2.56□□□□□ -2
PCDH15-219ENST00000448885 KRTAP10-4P60372 401 aaPredicted RBP2.55□□□□□ -2
PCDH15-219ENST00000448885 SRRM2Q9UQ35 2752 aaKnown RBP2.55□□□□□ -2
PCDH15-219ENST00000448885 KRTAP4-5Q9BYR2 181 aa2.53□□□□□ -2
PCDH15-219ENST00000448885 LPAP08519 4548 aa2.52□□□□□ -2.01
PCDH15-219ENST00000448885 LORP23490 312 aaPredicted RBP2.51□□□□□ -2.01
PCDH15-219ENST00000448885 LRP1Q07954 4544 aaKnown RBP2.51□□□□□ -2.01
PCDH15-219ENST00000448885 KRTAP19-2Q3LHN2 52 aa2.49□□□□□ -2.01
PCDH15-219ENST00000448885 KRTAP17-1Q9BYP8 105 aa2.48□□□□□ -2.01
PCDH15-219ENST00000448885 KRTAP10-7P60409 375 aaPredicted RBP2.44□□□□□ -2.02
PCDH15-219ENST00000448885 MUC17Q685J3 4493 aa2.44□□□□□ -2.02
PCDH15-219ENST00000448885 MT1HP80294 61 aa2.42□□□□□ -2.02
PCDH15-219ENST00000448885 LCE2DQ5TA82 110 aaPredicted RBP2.39□□□□□ -2.03
PCDH15-219ENST00000448885 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
PCDH15-219ENST00000448885 FLGP20930 4061 aaPredicted RBP2.38□□□□□ -2.03
PCDH15-219ENST00000448885 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
PCDH15-219ENST00000448885 LCE3CQ5T5A8 94 aa2.38□□□□□ -2.03
PCDH15-219ENST00000448885 KRTAP19-4Q3LI73 84 aa2.37□□□□□ -2.03
PCDH15-219ENST00000448885 SPRR2GQ9BYE4 73 aa2.37□□□□□ -2.03
PCDH15-219ENST00000448885 MT2AP02795 61 aa2.36□□□□□ -2.03
PCDH15-219ENST00000448885 KRTAP4-1Q9BYQ7 146 aa2.33□□□□□ -2.04
PCDH15-219ENST00000448885 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
PCDH15-219ENST00000448885 SPRR2EP22531 72 aa2.3□□□□□ -2.04
PCDH15-219ENST00000448885 SPRR2BP35325 72 aa2.3□□□□□ -2.04
PCDH15-219ENST00000448885 SPRR2AP35326 72 aa2.3□□□□□ -2.04
PCDH15-219ENST00000448885 USH2AO75445 5202 aa2.3□□□□□ -2.04
PCDH15-219ENST00000448885 MT1FP04733 61 aa2.29□□□□□ -2.04
PCDH15-219ENST00000448885 MUC2Q02817 5179 aa2.25□□□□□ -2.05
PCDH15-219ENST00000448885 SPRR2DP22532 72 aa2.24□□□□□ -2.05
PCDH15-219ENST00000448885 LCE3BQ5TA77 95 aa2.23□□□□□ -2.05
PCDH15-219ENST00000448885 LCE2BO14633 110 aa2.2□□□□□ -2.06
PCDH15-219ENST00000448885 KRTAP12-4P60329 112 aa2.18□□□□□ -2.06
PCDH15-219ENST00000448885 MT1GP13640 62 aa2.17□□□□□ -2.06
PCDH15-219ENST00000448885 KRTAP19-8Q3LI54 63 aa2.16□□□□□ -2.06
PCDH15-219ENST00000448885 LCE2AQ5TA79 106 aaPredicted RBP2.12□□□□□ -2.07
PCDH15-219ENST00000448885 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
PCDH15-219ENST00000448885 MT1XP80297 61 aa2.11□□□□□ -2.07
PCDH15-219ENST00000448885 LCE2CQ5TA81 110 aa2.11□□□□□ -2.07
PCDH15-219ENST00000448885 LCE3EQ5T5B0 92 aa2.09□□□□□ -2.08
PCDH15-219ENST00000448885 KRTAP19-1Q8IUB9 90 aa2.06□□□□□ -2.08
PCDH15-219ENST00000448885 MT1BP07438 61 aa2.05□□□□□ -2.08
PCDH15-219ENST00000448885 SPRR5A0A1B0GTR4 108 aa2.02□□□□□ -2.09
PCDH15-219ENST00000448885 KRTAP19-3Q7Z4W3 81 aa2□□□□□ -2.09
PCDH15-219ENST00000448885 KMT2DO14686 5537 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms