RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 TRAV22A0A0B4J277 110 aa12.23□□□□□ -0.45
CBX4-202ENST00000448310 LOC101927531A0A1B0GV80 90 aa12.2□□□□□ -0.46
CBX4-202ENST00000448310 ETDBQ3ZM63 59 aa12.19□□□□□ -0.46
CBX4-202ENST00000448310 GTF2H5Q6ZYL4 71 aa12.16□□□□□ -0.46
CBX4-202ENST00000448310 F8W1H4 67 aa12.13□□□□□ -0.47
CBX4-202ENST00000448310 NDUFC1O43677 76 aa12.09□□□□□ -0.47
CBX4-202ENST00000448310 H0YAA0 97 aa12.06□□□□□ -0.48
CBX4-202ENST00000448310 H0Y9P7 68 aa12.01□□□□□ -0.49
CBX4-202ENST00000448310 ADM2Q7Z4H4 148 aa12□□□□□ -0.49
CBX4-202ENST00000448310 UQCRQO14949 82 aa11.98□□□□□ -0.49
CBX4-202ENST00000448310 A8MUN3 132 aa11.95□□□□□ -0.5
CBX4-202ENST00000448310 HIST1H4AP62805 103 aaKnown RBP11.95□□□□□ -0.5
CBX4-202ENST00000448310 ATOX1O00244 68 aa11.94□□□□□ -0.5
CBX4-202ENST00000448310 SPRR2FQ96RM1 72 aa11.93□□□□□ -0.5
CBX4-202ENST00000448310 ACYP1P07311 99 aa11.92□□□□□ -0.5
CBX4-202ENST00000448310 MT1XP80297 61 aa11.9□□□□□ -0.5
CBX4-202ENST00000448310 PRO2289Q9P1D8 64 aa11.89□□□□□ -0.51
CBX4-202ENST00000448310 KRTAP2-3P0C7H8 128 aa11.88□□□□□ -0.51
CBX4-202ENST00000448310 ATP5EP2Q5VTU8 51 aa11.88□□□□□ -0.51
CBX4-202ENST00000448310 KRTAP2-4Q9BYR9 128 aa11.88□□□□□ -0.51
CBX4-202ENST00000448310 SPRR2EP22531 72 aa11.84□□□□□ -0.51
CBX4-202ENST00000448310 SPRR2BP35325 72 aa11.84□□□□□ -0.51
CBX4-202ENST00000448310 SPRR2AP35326 72 aa11.84□□□□□ -0.51
CBX4-202ENST00000448310 PCP4L1A6NKN8 68 aa11.81□□□□□ -0.52
CBX4-202ENST00000448310 FAM240AA0A1B0GVK7 77 aa11.8□□□□□ -0.52
CBX4-202ENST00000448310 PLAC4Q8WY50 150 aa11.8□□□□□ -0.52
CBX4-202ENST00000448310 LINC00208Q96KT6 92 aa11.79□□□□□ -0.52
CBX4-202ENST00000448310 KRTAP8-1Q8IUC2 63 aa11.74□□□□□ -0.53
CBX4-202ENST00000448310 P0C880 135 aa11.69□□□□□ -0.54
CBX4-202ENST00000448310 R4GN34 69 aa11.69□□□□□ -0.54
CBX4-202ENST00000448310 KRTAP12-2P59991 146 aa11.64□□□□□ -0.55
CBX4-202ENST00000448310 MP68P56378 58 aa11.62□□□□□ -0.55
CBX4-202ENST00000448310 LCE1AQ5T7P2 110 aa11.62□□□□□ -0.55
CBX4-202ENST00000448310 M0QZ58 72 aa11.61□□□□□ -0.55
CBX4-202ENST00000448310 LINC00643Q86TS7 51 aa11.6□□□□□ -0.55
CBX4-202ENST00000448310 OCR1Q9BZK8 76 aa11.6□□□□□ -0.55
CBX4-202ENST00000448310 C20orf197Q8N268 126 aa11.57□□□□□ -0.56
CBX4-202ENST00000448310 KRTAP4-8A0A0G2JLE6 195 aa11.55□□□□□ -0.56
CBX4-202ENST00000448310 KRTAP4-8Q9BYQ9 185 aa11.55□□□□□ -0.56
CBX4-202ENST00000448310 LINC01554Q52M75 96 aa11.5□□□□□ -0.57
CBX4-202ENST00000448310 KRTAP3-2Q9BYR7 98 aa11.5□□□□□ -0.57
CBX4-202ENST00000448310 KRTAP2-2Q9BYT5 123 aa11.48□□□□□ -0.57
CBX4-202ENST00000448310 KRTAP2-1Q9BYU5 128 aa11.48□□□□□ -0.57
CBX4-202ENST00000448310 DMAC1Q96GE9 116 aa11.45□□□□□ -0.58
CBX4-202ENST00000448310 SPRR2DP22532 72 aa11.44□□□□□ -0.58
CBX4-202ENST00000448310 KRTAP10-7P60409 375 aaPredicted RBP11.38□□□□□ -0.59
CBX4-202ENST00000448310 H3BPC8 53 aa11.36□□□□□ -0.59
CBX4-202ENST00000448310 KRTAP10-12P60413 245 aa11.27□□□□□ -0.61
CBX4-202ENST00000448310 SCGB1A1P11684 91 aa11.19□□□□□ -0.62
CBX4-202ENST00000448310 TRAV7A0A075B6U4 112 aa11.16□□□□□ -0.62
CBX4-202ENST00000448310 LCE3BQ5TA77 95 aa11.16□□□□□ -0.62
CBX4-202ENST00000448310 MT-ATP8P03928 68 aa11.15□□□□□ -0.62
CBX4-202ENST00000448310 A0A1B0GV90 55 aa11.11□□□□□ -0.63
CBX4-202ENST00000448310 ACYP2P14621 99 aa11.07□□□□□ -0.64
CBX4-202ENST00000448310 SPTSSBQ8NFR3 76 aa10.99□□□□□ -0.65
CBX4-202ENST00000448310 J3QR89 54 aa10.98□□□□□ -0.65
CBX4-202ENST00000448310 CHKB-CPT1BH3BT56 60 aa10.9□□□□□ -0.66
CBX4-202ENST00000448310 KRTAP13-4Q3LI77 160 aa10.78□□□□□ -0.68
CBX4-202ENST00000448310 DSTQ03001 7570 aaKnown RBP10.73□□□□□ -0.69
CBX4-202ENST00000448310 SMIM20Q8N5G0 67 aa10.73□□□□□ -0.69
CBX4-202ENST00000448310 CAMK2N1Q7Z7J9 78 aa10.71□□□□□ -0.69
CBX4-202ENST00000448310 SNURFQ9Y675 71 aa10.69□□□□□ -0.7
CBX4-202ENST00000448310 GPR98Q8WXG9 6306 aa10.67□□□□□ -0.7
CBX4-202ENST00000448310 KRTAP19-7Q3SYF9 63 aa10.64□□□□□ -0.71
CBX4-202ENST00000448310 LCE5AQ5TCM9 118 aa10.62□□□□□ -0.71
CBX4-202ENST00000448310 MT1EP04732 61 aa10.57□□□□□ -0.72
CBX4-202ENST00000448310 KRTAP19-3Q7Z4W3 81 aa10.54□□□□□ -0.72
CBX4-202ENST00000448310 SPANXA2-OT1Q8N9U9 137 aa10.53□□□□□ -0.72
CBX4-202ENST00000448310 KRTAP4-9Q9BYQ8 210 aa10.53□□□□□ -0.72
CBX4-202ENST00000448310 A0A0D9SG42 100 aa10.41□□□□□ -0.74
CBX4-202ENST00000448310 K7ERU9 68 aa10.38□□□□□ -0.75
CBX4-202ENST00000448310 CYSTM1Q9H1C7 97 aa10.32□□□□□ -0.76
CBX4-202ENST00000448310 COA5Q86WW8 74 aa10.31□□□□□ -0.76
CBX4-202ENST00000448310 KRTAP19-5Q3LI72 72 aa10.29□□□□□ -0.76
CBX4-202ENST00000448310 SPATA8Q6RVD6 105 aa10.29□□□□□ -0.76
CBX4-202ENST00000448310 SPINT4Q6UDR6 99 aa10.27□□□□□ -0.77
CBX4-202ENST00000448310 SERP2Q8N6R1 65 aa10.27□□□□□ -0.77
CBX4-202ENST00000448310 SEC61GP60059 68 aa10.24□□□□□ -0.77
CBX4-202ENST00000448310 SERP1Q9Y6X1 66 aa10.24□□□□□ -0.77
CBX4-202ENST00000448310 MT1GP13640 62 aa10.23□□□□□ -0.77
CBX4-202ENST00000448310 LCE1DQ5T752 114 aa10.21□□□□□ -0.77
CBX4-202ENST00000448310 KRTAP12-1P59990 96 aa10.15□□□□□ -0.78
CBX4-202ENST00000448310 A0A1B0GU33 70 aa10.14□□□□□ -0.79
CBX4-202ENST00000448310 PP632Q6XCG6 107 aa10.13□□□□□ -0.79
CBX4-202ENST00000448310 MT1MQ8N339 61 aa10.1□□□□□ -0.79
CBX4-202ENST00000448310 HMCN1Q96RW7 5635 aa10.08□□□□□ -0.8
CBX4-202ENST00000448310 MT4P47944 62 aa10.07□□□□□ -0.8
CBX4-202ENST00000448310 LCE4AQ5TA78 99 aa10.05□□□□□ -0.8
CBX4-202ENST00000448310 MT1LQ93083 61 aa10.04□□□□□ -0.8
CBX4-202ENST00000448310 KRTAP4-3Q9BYR4 195 aa9.93□□□□□ -0.82
CBX4-202ENST00000448310 AHNAK2Q8IVF2 5795 aa9.9□□□□□ -0.82
CBX4-202ENST00000448310 LCE3AQ5TA76 89 aa9.88□□□□□ -0.83
CBX4-202ENST00000448310 C10orf95Q9H7T3 257 aa9.88□□□□□ -0.83
CBX4-202ENST00000448310 A8MU10 97 aa9.85□□□□□ -0.83
CBX4-202ENST00000448310 COX7CP15954 63 aa9.84□□□□□ -0.83
CBX4-202ENST00000448310 SMIM26A0A096LP01 95 aa9.83□□□□□ -0.84
CBX4-202ENST00000448310 H7BZZ5 65 aa9.81□□□□□ -0.84
CBX4-202ENST00000448310 KRTAP5-4Q6L8H1 288 aa9.81□□□□□ -0.84
CBX4-202ENST00000448310 A0A1B0GU69 56 aa9.78□□□□□ -0.84
CBX4-202ENST00000448310 TNP1P09430 55 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms