RNA–Protein interactions for RNA: ENST00000446273.1

TNRC6B-205, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TNRC6B, Length 4,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-205ENST00000446273 PLECQ15149 4684 aaKnown RBP4.02□□□□□ -1.77
TNRC6B-205ENST00000446273 DYNC2H1Q8NCM8 4307 aaKnown RBP4.01□□□□□ -1.77
TNRC6B-205ENST00000446273 KRTAP10-6P60371 365 aaPredicted RBP3.99□□□□□ -1.77
TNRC6B-205ENST00000446273 VPS13DQ5THJ4 4388 aa3.99□□□□□ -1.77
TNRC6B-205ENST00000446273 KRTAP12-1P59990 96 aa3.97□□□□□ -1.77
TNRC6B-205ENST00000446273 DNAH17Q9UFH2 4485 aa3.95□□□□□ -1.78
TNRC6B-205ENST00000446273 DNAH5Q8TE73 4624 aa3.94□□□□□ -1.78
TNRC6B-205ENST00000446273 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
TNRC6B-205ENST00000446273 C10orf95Q9H7T3 257 aa3.93□□□□□ -1.78
TNRC6B-205ENST00000446273 DNAH8Q96JB1 4490 aa3.93□□□□□ -1.78
TNRC6B-205ENST00000446273 DNAH11Q96DT5 4516 aa3.93□□□□□ -1.78
TNRC6B-205ENST00000446273 PRKDCP78527 4128 aaKnown RBP3.92□□□□□ -1.78
TNRC6B-205ENST00000446273 KRTAP13-4Q3LI77 160 aa3.92□□□□□ -1.78
TNRC6B-205ENST00000446273 KMT2AQ03164 3969 aa3.91□□□□□ -1.78
TNRC6B-205ENST00000446273 KRTAP3-3Q9BYR6 98 aa3.91□□□□□ -1.78
TNRC6B-205ENST00000446273 STARD9Q9P2P6 4700 aa3.91□□□□□ -1.78
TNRC6B-205ENST00000446273 KRTAP3-2Q9BYR7 98 aa3.9□□□□□ -1.78
TNRC6B-205ENST00000446273 HECTD4Q9Y4D8 3996 aa3.88□□□□□ -1.79
TNRC6B-205ENST00000446273 DNAH2Q9P225 4427 aa3.86□□□□□ -1.79
TNRC6B-205ENST00000446273 DYNC1H1Q14204 4646 aaKnown RBP3.85□□□□□ -1.79
TNRC6B-205ENST00000446273 DNAH6Q9C0G6 4158 aa3.79□□□□□ -1.8
TNRC6B-205ENST00000446273 FAT2Q9NYQ8 4349 aa3.79□□□□□ -1.8
TNRC6B-205ENST00000446273 LRP1BQ9NZR2 4599 aa3.79□□□□□ -1.8
TNRC6B-205ENST00000446273 KIAA1109Q2LD37 5005 aa3.79□□□□□ -1.8
TNRC6B-205ENST00000446273 RYR1P21817 5038 aa3.78□□□□□ -1.8
TNRC6B-205ENST00000446273 KRTAP23-1A1A580 65 aa3.78□□□□□ -1.81
TNRC6B-205ENST00000446273 FAT1Q14517 4588 aa3.76□□□□□ -1.81
TNRC6B-205ENST00000446273 RYR3Q15413 4870 aa3.74□□□□□ -1.81
TNRC6B-205ENST00000446273 VPS13BQ7Z7G8 4022 aa3.7□□□□□ -1.82
TNRC6B-205ENST00000446273 RYR2Q92736 4967 aa3.69□□□□□ -1.82
TNRC6B-205ENST00000446273 BIRC6Q9NR09 4857 aa3.69□□□□□ -1.82
TNRC6B-205ENST00000446273 SACSQ9NZJ4 4579 aa3.67□□□□□ -1.82
TNRC6B-205ENST00000446273 KRTAP17-1Q9BYP8 105 aa3.67□□□□□ -1.82
TNRC6B-205ENST00000446273 PKD1P98161 4303 aa3.66□□□□□ -1.82
TNRC6B-205ENST00000446273 KRTAP15-1Q3LI76 137 aa3.64□□□□□ -1.83
TNRC6B-205ENST00000446273 HYDINQ4G0P3 5121 aa3.62□□□□□ -1.83
TNRC6B-205ENST00000446273 KRTAP4-1Q9BYQ7 146 aa3.61□□□□□ -1.83
TNRC6B-205ENST00000446273 PKHD1P08F94 4074 aa3.61□□□□□ -1.83
TNRC6B-205ENST00000446273 HERC2O95714 4834 aa3.6□□□□□ -1.83
TNRC6B-205ENST00000446273 APOBP04114 4563 aaKnown RBP3.58□□□□□ -1.84
TNRC6B-205ENST00000446273 KRTAP10-12P60413 245 aa3.56□□□□□ -1.84
TNRC6B-205ENST00000446273 MT1HP80294 61 aa3.55□□□□□ -1.84
TNRC6B-205ENST00000446273 KMT2CQ8NEZ4 4911 aaKnown RBP3.53□□□□□ -1.84
TNRC6B-205ENST00000446273 PKHD1L1Q86WI1 4243 aa3.52□□□□□ -1.85
TNRC6B-205ENST00000446273 LORP23490 312 aaPredicted RBP3.51□□□□□ -1.85
TNRC6B-205ENST00000446273 FAT3Q8TDW7 4589 aa3.48□□□□□ -1.85
TNRC6B-205ENST00000446273 SPRR2GQ9BYE4 73 aa3.48□□□□□ -1.85
TNRC6B-205ENST00000446273 LRP1Q07954 4544 aaKnown RBP3.48□□□□□ -1.85
TNRC6B-205ENST00000446273 HSPG2P98160 4391 aa3.45□□□□□ -1.86
TNRC6B-205ENST00000446273 MT2AP02795 61 aa3.45□□□□□ -1.86
TNRC6B-205ENST00000446273 INE1O15225 51 aa3.44□□□□□ -1.86
TNRC6B-205ENST00000446273 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
TNRC6B-205ENST00000446273 MYCBP2O75592 4640 aa3.42□□□□□ -1.86
TNRC6B-205ENST00000446273 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
TNRC6B-205ENST00000446273 KRTAP8-1Q8IUC2 63 aa3.41□□□□□ -1.86
TNRC6B-205ENST00000446273 LPAP08519 4548 aa3.4□□□□□ -1.86
TNRC6B-205ENST00000446273 EPPK1P58107 5090 aaKnown RBP3.4□□□□□ -1.86
TNRC6B-205ENST00000446273 TNXBP22105 4242 aa3.39□□□□□ -1.87
TNRC6B-205ENST00000446273 LCE3AQ5TA76 89 aa3.38□□□□□ -1.87
TNRC6B-205ENST00000446273 HERC1Q15751 4861 aa3.37□□□□□ -1.87
TNRC6B-205ENST00000446273 MT1FP04733 61 aa3.37□□□□□ -1.87
TNRC6B-205ENST00000446273 PCLOQ9Y6V0 5065 aa3.37□□□□□ -1.87
TNRC6B-205ENST00000446273 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
TNRC6B-205ENST00000446273 LRP2P98164 4655 aa3.32□□□□□ -1.88
TNRC6B-205ENST00000446273 KRTAP19-8Q3LI54 63 aa3.31□□□□□ -1.88
TNRC6B-205ENST00000446273 LCE2CQ5TA81 110 aa3.27□□□□□ -1.89
TNRC6B-205ENST00000446273 KRTAP19-1Q8IUB9 90 aa3.24□□□□□ -1.89
TNRC6B-205ENST00000446273 KRTAP9-8Q9BYQ0 159 aa3.21□□□□□ -1.89
TNRC6B-205ENST00000446273 KRTAP19-2Q3LHN2 52 aa3.18□□□□□ -1.9
TNRC6B-205ENST00000446273 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
TNRC6B-205ENST00000446273 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.9
TNRC6B-205ENST00000446273 CRCT1Q9UGL9 99 aa3.15□□□□□ -1.9
TNRC6B-205ENST00000446273 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
TNRC6B-205ENST00000446273 KRTAP9-3Q9BYQ3 159 aa3.14□□□□□ -1.91
TNRC6B-205ENST00000446273 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
TNRC6B-205ENST00000446273 MT1BP07438 61 aa3.11□□□□□ -1.91
TNRC6B-205ENST00000446273 UBR4Q5T4S7 5183 aa3.1□□□□□ -1.91
TNRC6B-205ENST00000446273 MT1XP80297 61 aa3.1□□□□□ -1.91
TNRC6B-205ENST00000446273 LCE2AQ5TA79 106 aaPredicted RBP3.09□□□□□ -1.91
TNRC6B-205ENST00000446273 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.92
TNRC6B-205ENST00000446273 RNF213Q63HN8 5207 aa3.08□□□□□ -1.92
TNRC6B-205ENST00000446273 KRTAP9-2Q9BYQ4 174 aa3.08□□□□□ -1.92
TNRC6B-205ENST00000446273 MUC17Q685J3 4493 aa3.07□□□□□ -1.92
TNRC6B-205ENST00000446273 KRTAP19-5Q3LI72 72 aa3.07□□□□□ -1.92
TNRC6B-205ENST00000446273 HMCN2Q8NDA2 5059 aa3.06□□□□□ -1.92
TNRC6B-205ENST00000446273 MUC2Q02817 5179 aa3.04□□□□□ -1.92
TNRC6B-205ENST00000446273 FAT4Q6V0I7 4981 aa3.04□□□□□ -1.92
TNRC6B-205ENST00000446273 LCE2BO14633 110 aa3.03□□□□□ -1.92
TNRC6B-205ENST00000446273 KRTAP9-6A0A140TA67 174 aa3.02□□□□□ -1.93
TNRC6B-205ENST00000446273 LCE2DQ5TA82 110 aaPredicted RBP3.02□□□□□ -1.93
TNRC6B-205ENST00000446273 SPRR2EP22531 72 aa3.01□□□□□ -1.93
TNRC6B-205ENST00000446273 SPRR2BP35325 72 aa3.01□□□□□ -1.93
TNRC6B-205ENST00000446273 SPRR2AP35326 72 aa3.01□□□□□ -1.93
TNRC6B-205ENST00000446273 FLGP20930 4061 aaPredicted RBP3.01□□□□□ -1.93
TNRC6B-205ENST00000446273 MT1GP13640 62 aa2.97□□□□□ -1.93
TNRC6B-205ENST00000446273 SPRR2DP22532 72 aa2.94□□□□□ -1.94
TNRC6B-205ENST00000446273 KRTAP19-6Q3LI70 58 aa2.94□□□□□ -1.94
TNRC6B-205ENST00000446273 FSIP2Q5CZC0 6907 aa2.92□□□□□ -1.94
TNRC6B-205ENST00000446273 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
TNRC6B-205ENST00000446273 KRTAP4-8A0A0G2JLE6 195 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms