RNA–Protein interactions for RNA: ENST00000445177.5

SIK3-204, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 5

Gene SIK3, Length 6,331 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-204ENST00000445177 KRTAP10-4P60372 401 aaPredicted RBP6.44□□□□□ -1.38
SIK3-204ENST00000445177 DNAH5Q8TE73 4624 aa6.41□□□□□ -1.38
SIK3-204ENST00000445177 A0A0A0MQY5 61 aa6.41□□□□□ -1.38
SIK3-204ENST00000445177 VPS13DQ5THJ4 4388 aa6.38□□□□□ -1.39
SIK3-204ENST00000445177 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
SIK3-204ENST00000445177 DNAH3Q8TD57 4116 aa6.36□□□□□ -1.39
SIK3-204ENST00000445177 FRAS1Q86XX4 4008 aa6.35□□□□□ -1.39
SIK3-204ENST00000445177 KRTAP12-1P59990 96 aa6.3□□□□□ -1.4
SIK3-204ENST00000445177 DNAH7Q8WXX0 4024 aa6.3□□□□□ -1.4
SIK3-204ENST00000445177 DNAH2Q9P225 4427 aa6.3□□□□□ -1.4
SIK3-204ENST00000445177 DNAH17Q9UFH2 4485 aa6.3□□□□□ -1.4
SIK3-204ENST00000445177 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
SIK3-204ENST00000445177 DNAH8Q96JB1 4490 aa6.27□□□□□ -1.41
SIK3-204ENST00000445177 LRP1BQ9NZR2 4599 aa6.23□□□□□ -1.41
SIK3-204ENST00000445177 FAT1Q14517 4588 aa6.23□□□□□ -1.41
SIK3-204ENST00000445177 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
SIK3-204ENST00000445177 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
SIK3-204ENST00000445177 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
SIK3-204ENST00000445177 DYNC1H1Q14204 4646 aaKnown RBP6.17□□□□□ -1.42
SIK3-204ENST00000445177 DNAH6Q9C0G6 4158 aa6.17□□□□□ -1.42
SIK3-204ENST00000445177 VPS13BQ7Z7G8 4022 aa6.16□□□□□ -1.42
SIK3-204ENST00000445177 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
SIK3-204ENST00000445177 PRO2289Q9P1D8 64 aa6.12□□□□□ -1.43
SIK3-204ENST00000445177 FAT2Q9NYQ8 4349 aa6.11□□□□□ -1.43
SIK3-204ENST00000445177 HECTD4Q9Y4D8 3996 aa6.07□□□□□ -1.44
SIK3-204ENST00000445177 SACSQ9NZJ4 4579 aa6.03□□□□□ -1.44
SIK3-204ENST00000445177 LORP23490 312 aaPredicted RBP6.02□□□□□ -1.45
SIK3-204ENST00000445177 HYDINQ4G0P3 5121 aa5.97□□□□□ -1.45
SIK3-204ENST00000445177 RYR1P21817 5038 aa5.94□□□□□ -1.46
SIK3-204ENST00000445177 KRTAP4-1Q9BYQ7 146 aa5.93□□□□□ -1.46
SIK3-204ENST00000445177 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
SIK3-204ENST00000445177 PKHD1P08F94 4074 aa5.86□□□□□ -1.47
SIK3-204ENST00000445177 MYCBP2O75592 4640 aa5.86□□□□□ -1.47
SIK3-204ENST00000445177 LRP1Q07954 4544 aaKnown RBP5.85□□□□□ -1.47
SIK3-204ENST00000445177 APOBP04114 4563 aaKnown RBP5.83□□□□□ -1.48
SIK3-204ENST00000445177 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
SIK3-204ENST00000445177 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
SIK3-204ENST00000445177 RYR3Q15413 4870 aa5.76□□□□□ -1.49
SIK3-204ENST00000445177 KIAA1109Q2LD37 5005 aa5.7□□□□□ -1.5
SIK3-204ENST00000445177 HSPG2P98160 4391 aa5.68□□□□□ -1.5
SIK3-204ENST00000445177 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
SIK3-204ENST00000445177 PKD1P98161 4303 aa5.66□□□□□ -1.5
SIK3-204ENST00000445177 RYR2Q92736 4967 aa5.65□□□□□ -1.5
SIK3-204ENST00000445177 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
SIK3-204ENST00000445177 CRCT1Q9UGL9 99 aa5.63□□□□□ -1.51
SIK3-204ENST00000445177 LPAP08519 4548 aa5.63□□□□□ -1.51
SIK3-204ENST00000445177 MT1HP80294 61 aa5.61□□□□□ -1.51
SIK3-204ENST00000445177 KMT2CQ8NEZ4 4911 aaKnown RBP5.52□□□□□ -1.53
SIK3-204ENST00000445177 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
SIK3-204ENST00000445177 MT2AP02795 61 aa5.48□□□□□ -1.53
SIK3-204ENST00000445177 LRP2P98164 4655 aa5.47□□□□□ -1.53
SIK3-204ENST00000445177 MT1FP04733 61 aa5.45□□□□□ -1.54
SIK3-204ENST00000445177 PKHD1L1Q86WI1 4243 aa5.43□□□□□ -1.54
SIK3-204ENST00000445177 TNXBP22105 4242 aa5.42□□□□□ -1.54
SIK3-204ENST00000445177 HERC2O95714 4834 aa5.37□□□□□ -1.55
SIK3-204ENST00000445177 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
SIK3-204ENST00000445177 EPPK1P58107 5090 aaKnown RBP5.28□□□□□ -1.56
SIK3-204ENST00000445177 KRTAP8-1Q8IUC2 63 aa5.26□□□□□ -1.57
SIK3-204ENST00000445177 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
SIK3-204ENST00000445177 BIRC6Q9NR09 4857 aa5.18□□□□□ -1.58
SIK3-204ENST00000445177 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.59
SIK3-204ENST00000445177 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
SIK3-204ENST00000445177 KRTAP10-7P60409 375 aaPredicted RBP5.12□□□□□ -1.59
SIK3-204ENST00000445177 LCE2CQ5TA81 110 aa5.09□□□□□ -1.59
SIK3-204ENST00000445177 ABCA13Q86UQ4 5058 aa5.07□□□□□ -1.6
SIK3-204ENST00000445177 KRTAP9-8Q9BYQ0 159 aa5.05□□□□□ -1.6
SIK3-204ENST00000445177 HERC1Q15751 4861 aa5.04□□□□□ -1.6
SIK3-204ENST00000445177 KRTAP10-5P60370 271 aa5.02□□□□□ -1.61
SIK3-204ENST00000445177 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
SIK3-204ENST00000445177 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
SIK3-204ENST00000445177 MT1XP80297 61 aa4.99□□□□□ -1.61
SIK3-204ENST00000445177 MT1BP07438 61 aa4.97□□□□□ -1.61
SIK3-204ENST00000445177 INE1O15225 51 aa4.95□□□□□ -1.62
SIK3-204ENST00000445177 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
SIK3-204ENST00000445177 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
SIK3-204ENST00000445177 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
SIK3-204ENST00000445177 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
SIK3-204ENST00000445177 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.63
SIK3-204ENST00000445177 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
SIK3-204ENST00000445177 FLGP20930 4061 aaPredicted RBP4.88□□□□□ -1.63
SIK3-204ENST00000445177 MUC2Q02817 5179 aa4.87□□□□□ -1.63
SIK3-204ENST00000445177 MUC17Q685J3 4493 aa4.8□□□□□ -1.64
SIK3-204ENST00000445177 LCE2BO14633 110 aa4.77□□□□□ -1.65
SIK3-204ENST00000445177 FSIP2Q5CZC0 6907 aa4.75□□□□□ -1.65
SIK3-204ENST00000445177 UBR4Q5T4S7 5183 aa4.73□□□□□ -1.65
SIK3-204ENST00000445177 FAT4Q6V0I7 4981 aa4.71□□□□□ -1.66
SIK3-204ENST00000445177 MT1GP13640 62 aa4.69□□□□□ -1.66
SIK3-204ENST00000445177 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
SIK3-204ENST00000445177 SPRR2EP22531 72 aa4.66□□□□□ -1.66
SIK3-204ENST00000445177 SPRR2BP35325 72 aa4.66□□□□□ -1.66
SIK3-204ENST00000445177 SPRR2AP35326 72 aa4.66□□□□□ -1.66
SIK3-204ENST00000445177 RNF213Q63HN8 5207 aa4.65□□□□□ -1.66
SIK3-204ENST00000445177 HMCN2Q8NDA2 5059 aa4.63□□□□□ -1.67
SIK3-204ENST00000445177 LCE3BQ5TA77 95 aa4.6□□□□□ -1.67
SIK3-204ENST00000445177 SPRR2DP22532 72 aa4.47□□□□□ -1.69
SIK3-204ENST00000445177 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
SIK3-204ENST00000445177 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
SIK3-204ENST00000445177 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
SIK3-204ENST00000445177 MT1LQ93083 61 aa4.41□□□□□ -1.7
SIK3-204ENST00000445177 LCE2AQ5TA79 106 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms