RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 LINC00208Q96KT6 92 aa1.89□□□□□ -2.11
HMGB3P6-201ENST00000444896 RBM12B-AS1Q9P1G2 102 aa1.89□□□□□ -2.11
HMGB3P6-201ENST00000444896 TENM2Q9NT68 2774 aa1.89□□□□□ -2.11
HMGB3P6-201ENST00000444896 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
HMGB3P6-201ENST00000444896 CD164Q04900 197 aa1.88□□□□□ -2.11
HMGB3P6-201ENST00000444896 C4orf26Q17RF5 130 aa1.88□□□□□ -2.11
HMGB3P6-201ENST00000444896 HRCT1Q6UXD1 115 aa1.88□□□□□ -2.11
HMGB3P6-201ENST00000444896 Q96NJ1 140 aa1.88□□□□□ -2.11
HMGB3P6-201ENST00000444896 CYP4F30PQ9H0H9 118 aa1.88□□□□□ -2.11
HMGB3P6-201ENST00000444896 C8orf87E5RJ46 101 aa1.87□□□□□ -2.11
HMGB3P6-201ENST00000444896 SSBP3-AS1Q7Z2R9 100 aa1.87□□□□□ -2.11
HMGB3P6-201ENST00000444896 MRPL34Q9BQ48 92 aaKnown RBP1.87□□□□□ -2.11
HMGB3P6-201ENST00000444896 MEGF8Q7Z7M0 2845 aa1.86□□□□□ -2.11
HMGB3P6-201ENST00000444896 ASB16-AS1Q495Z4 193 aa1.86□□□□□ -2.11
HMGB3P6-201ENST00000444896 FAM229BQ4G0N7 80 aa1.86□□□□□ -2.11
HMGB3P6-201ENST00000444896 FP248Q71RG6 208 aaPredicted RBP1.86□□□□□ -2.11
HMGB3P6-201ENST00000444896 LIMD2Q9BT23 127 aa1.86□□□□□ -2.11
HMGB3P6-201ENST00000444896 FAT2Q9NYQ8 4349 aa1.86□□□□□ -2.11
HMGB3P6-201ENST00000444896 LOC101927531A0A1B0GV80 90 aa1.85□□□□□ -2.11
HMGB3P6-201ENST00000444896 K7ERS5 55 aa1.85□□□□□ -2.11
HMGB3P6-201ENST00000444896 Q1T7F1 81 aa1.85□□□□□ -2.11
HMGB3P6-201ENST00000444896 C1orf195Q5TG92 126 aa1.85□□□□□ -2.11
HMGB3P6-201ENST00000444896 SPINK6Q6UWN8 80 aa1.85□□□□□ -2.11
HMGB3P6-201ENST00000444896 Q6ZSA8 131 aa1.85□□□□□ -2.11
HMGB3P6-201ENST00000444896 VPS13BQ7Z7G8 4022 aa1.85□□□□□ -2.11
HMGB3P6-201ENST00000444896 SRRM2Q9UQ35 2752 aaKnown RBP1.84□□□□□ -2.11
HMGB3P6-201ENST00000444896 LRP1BQ9NZR2 4599 aa1.84□□□□□ -2.11
HMGB3P6-201ENST00000444896 PKD1P98161 4303 aa1.84□□□□□ -2.12
HMGB3P6-201ENST00000444896 TGP01266 2768 aa1.83□□□□□ -2.12
HMGB3P6-201ENST00000444896 FBN3Q75N90 2809 aa1.83□□□□□ -2.12
HMGB3P6-201ENST00000444896 SACSQ9NZJ4 4579 aa1.83□□□□□ -2.12
HMGB3P6-201ENST00000444896 A0A1B0GU33 70 aa1.83□□□□□ -2.12
HMGB3P6-201ENST00000444896 LINC00313P59037 77 aa1.83□□□□□ -2.12
HMGB3P6-201ENST00000444896 PCOTHQ58A44 107 aa1.83□□□□□ -2.12
HMGB3P6-201ENST00000444896 COA5Q86WW8 74 aa1.83□□□□□ -2.12
HMGB3P6-201ENST00000444896 BRK1Q8WUW1 75 aa1.83□□□□□ -2.12
HMGB3P6-201ENST00000444896 DYNC1H1Q14204 4646 aaKnown RBP1.82□□□□□ -2.12
HMGB3P6-201ENST00000444896 APOBP04114 4563 aaKnown RBP1.81□□□□□ -2.12
HMGB3P6-201ENST00000444896 SPINK1P00995 79 aa1.81□□□□□ -2.12
HMGB3P6-201ENST00000444896 RPS29P62273 56 aaKnown RBP1.81□□□□□ -2.12
HMGB3P6-201ENST00000444896 CHKB-CPT1BH3BT56 60 aa1.8□□□□□ -2.12
HMGB3P6-201ENST00000444896 ACYP2P14621 99 aa1.8□□□□□ -2.12
HMGB3P6-201ENST00000444896 SPAG11AQ6PDA7 123 aa1.8□□□□□ -2.12
HMGB3P6-201ENST00000444896 PRR15LQ9BU68 103 aa1.8□□□□□ -2.12
HMGB3P6-201ENST00000444896 A8MUN3 132 aa1.79□□□□□ -2.12
HMGB3P6-201ENST00000444896 Q5VV11 94 aa1.79□□□□□ -2.12
HMGB3P6-201ENST00000444896 PKHD1P08F94 4074 aa1.79□□□□□ -2.12
HMGB3P6-201ENST00000444896 PKHD1L1Q86WI1 4243 aa1.78□□□□□ -2.12
HMGB3P6-201ENST00000444896 HYDINQ4G0P3 5121 aa1.78□□□□□ -2.12
HMGB3P6-201ENST00000444896 A6NED7 52 aa1.78□□□□□ -2.12
HMGB3P6-201ENST00000444896 DMAC1Q96GE9 116 aa1.78□□□□□ -2.12
HMGB3P6-201ENST00000444896 C20orf166-AS1Q96NR2 134 aa1.78□□□□□ -2.12
HMGB3P6-201ENST00000444896 LINC01558Q9Y6Z2 57 aa1.78□□□□□ -2.12
HMGB3P6-201ENST00000444896 C7orf65Q6ZTY9 151 aa1.77□□□□□ -2.13
HMGB3P6-201ENST00000444896 RETNLBQ9BQ08 111 aa1.77□□□□□ -2.13
HMGB3P6-201ENST00000444896 FAT1Q14517 4588 aa1.76□□□□□ -2.13
HMGB3P6-201ENST00000444896 SMR3BP02814 79 aaPredicted RBP1.75□□□□□ -2.13
HMGB3P6-201ENST00000444896 CDC42SE1Q9NRR8 79 aa1.75□□□□□ -2.13
HMGB3P6-201ENST00000444896 A0A1B0GU69 56 aa1.74□□□□□ -2.13
HMGB3P6-201ENST00000444896 ATP11AUNQ6ZP68 121 aa1.74□□□□□ -2.13
HMGB3P6-201ENST00000444896 SPTSSBQ8NFR3 76 aa1.74□□□□□ -2.13
HMGB3P6-201ENST00000444896 RYR2Q92736 4967 aa1.74□□□□□ -2.13
HMGB3P6-201ENST00000444896 PMAIP1Q13794 54 aa1.73□□□□□ -2.13
HMGB3P6-201ENST00000444896 TNXBP22105 4242 aa1.72□□□□□ -2.13
HMGB3P6-201ENST00000444896 FAT3Q8TDW7 4589 aa1.72□□□□□ -2.13
HMGB3P6-201ENST00000444896 C9orf92A6NGG3 77 aa1.72□□□□□ -2.13
HMGB3P6-201ENST00000444896 KRTAP10-4P60372 401 aaPredicted RBP1.72□□□□□ -2.13
HMGB3P6-201ENST00000444896 UQCR11O14957 56 aa1.71□□□□□ -2.14
HMGB3P6-201ENST00000444896 SPINK7P58062 85 aa1.71□□□□□ -2.14
HMGB3P6-201ENST00000444896 LCA10Q71F78 164 aa1.71□□□□□ -2.14
HMGB3P6-201ENST00000444896 KMT2CQ8NEZ4 4911 aaKnown RBP1.7□□□□□ -2.14
HMGB3P6-201ENST00000444896 KRTAP12-1P59990 96 aa1.7□□□□□ -2.14
HMGB3P6-201ENST00000444896 Q5VSD8 79 aa1.7□□□□□ -2.14
HMGB3P6-201ENST00000444896 KTN1-AS1Q86SY8 53 aa1.7□□□□□ -2.14
HMGB3P6-201ENST00000444896 HSPG2P98160 4391 aa1.7□□□□□ -2.14
HMGB3P6-201ENST00000444896 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
HMGB3P6-201ENST00000444896 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
HMGB3P6-201ENST00000444896 A6NN06 94 aa1.68□□□□□ -2.14
HMGB3P6-201ENST00000444896 SPATA8Q6RVD6 105 aa1.68□□□□□ -2.14
HMGB3P6-201ENST00000444896 FLG2Q5D862 2391 aaPredicted RBP1.67□□□□□ -2.14
HMGB3P6-201ENST00000444896 RYR1P21817 5038 aa1.67□□□□□ -2.14
HMGB3P6-201ENST00000444896 LRP1Q07954 4544 aaKnown RBP1.67□□□□□ -2.14
HMGB3P6-201ENST00000444896 RPL37P61927 97 aaKnown RBP1.67□□□□□ -2.14
HMGB3P6-201ENST00000444896 COX6B2Q6YFQ2 88 aa1.67□□□□□ -2.14
HMGB3P6-201ENST00000444896 RYR3Q15413 4870 aa1.65□□□□□ -2.15
HMGB3P6-201ENST00000444896 MYCBP2O75592 4640 aa1.64□□□□□ -2.15
HMGB3P6-201ENST00000444896 H1FX-AS1Q4G0G2 97 aa1.63□□□□□ -2.15
HMGB3P6-201ENST00000444896 S4R3F8 94 aa1.63□□□□□ -2.15
HMGB3P6-201ENST00000444896 DMBT1Q9UGM3 2413 aaPredicted RBP1.62□□□□□ -2.15
HMGB3P6-201ENST00000444896 H0YAA0 97 aa1.62□□□□□ -2.15
HMGB3P6-201ENST00000444896 TPRXLQ17RH7 258 aa1.62□□□□□ -2.15
HMGB3P6-201ENST00000444896 KRTAP13-4Q3LI77 160 aa1.62□□□□□ -2.15
HMGB3P6-201ENST00000444896 MT1HL1P0DM35 61 aa1.61□□□□□ -2.15
HMGB3P6-201ENST00000444896 CSAG1Q6PB30 78 aa1.58□□□□□ -2.16
HMGB3P6-201ENST00000444896 MUC17Q685J3 4493 aa1.57□□□□□ -2.16
HMGB3P6-201ENST00000444896 CRCT1Q9UGL9 99 aa1.57□□□□□ -2.16
HMGB3P6-201ENST00000444896 KIAA1109Q2LD37 5005 aa1.56□□□□□ -2.16
HMGB3P6-201ENST00000444896 LRP2P98164 4655 aa1.56□□□□□ -2.16
HMGB3P6-201ENST00000444896 A0A0D9SG42 100 aa1.56□□□□□ -2.16
HMGB3P6-201ENST00000444896 LINC01554Q52M75 96 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms