RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 COX6B2Q6YFQ2 88 aa5.36□□□□□ -1.55
CASP4-203ENST00000444739 C20orf166-AS1Q96NR2 134 aa5.36□□□□□ -1.55
CASP4-203ENST00000444739 FAT2Q9NYQ8 4349 aa5.36□□□□□ -1.55
CASP4-203ENST00000444739 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
CASP4-203ENST00000444739 SACSQ9NZJ4 4579 aa5.34□□□□□ -1.55
CASP4-203ENST00000444739 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
CASP4-203ENST00000444739 KRTAP19-1Q8IUB9 90 aa5.32□□□□□ -1.56
CASP4-203ENST00000444739 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
CASP4-203ENST00000444739 PKHD1L1Q86WI1 4243 aa5.29□□□□□ -1.56
CASP4-203ENST00000444739 HYDINQ4G0P3 5121 aa5.26□□□□□ -1.57
CASP4-203ENST00000444739 RPL37P61927 97 aaKnown RBP5.25□□□□□ -1.57
CASP4-203ENST00000444739 TPRXLQ17RH7 258 aa5.25□□□□□ -1.57
CASP4-203ENST00000444739 KRTAP10-6P60371 365 aaPredicted RBP5.24□□□□□ -1.57
CASP4-203ENST00000444739 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
CASP4-203ENST00000444739 PKHD1P08F94 4074 aa5.21□□□□□ -1.58
CASP4-203ENST00000444739 SPINT4Q6UDR6 99 aa5.2□□□□□ -1.58
CASP4-203ENST00000444739 A0A0D9SG42 100 aa5.18□□□□□ -1.58
CASP4-203ENST00000444739 APOBP04114 4563 aaKnown RBP5.18□□□□□ -1.58
CASP4-203ENST00000444739 C10orf95Q9H7T3 257 aa5.16□□□□□ -1.58
CASP4-203ENST00000444739 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.58
CASP4-203ENST00000444739 KRTAP21-3Q3LHN1 58 aa5.12□□□□□ -1.59
CASP4-203ENST00000444739 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
CASP4-203ENST00000444739 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
CASP4-203ENST00000444739 SMR3BP02814 79 aaPredicted RBP5.11□□□□□ -1.59
CASP4-203ENST00000444739 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
CASP4-203ENST00000444739 S4R3F8 94 aa5.1□□□□□ -1.59
CASP4-203ENST00000444739 FAT1Q14517 4588 aa5.09□□□□□ -1.59
CASP4-203ENST00000444739 DMBT1Q9UGM3 2413 aaPredicted RBP5.09□□□□□ -1.59
CASP4-203ENST00000444739 DYNC1H1Q14204 4646 aaKnown RBP5.09□□□□□ -1.6
CASP4-203ENST00000444739 KRTAP10-4P60372 401 aaPredicted RBP5.08□□□□□ -1.6
CASP4-203ENST00000444739 KRTAP12-2P59991 146 aa5.08□□□□□ -1.6
CASP4-203ENST00000444739 HSPG2P98160 4391 aa5.05□□□□□ -1.6
CASP4-203ENST00000444739 FAT3Q8TDW7 4589 aa5.05□□□□□ -1.6
CASP4-203ENST00000444739 LRP1Q07954 4544 aaKnown RBP5.05□□□□□ -1.6
CASP4-203ENST00000444739 TNXBP22105 4242 aa5.05□□□□□ -1.6
CASP4-203ENST00000444739 DNHD1Q96M86 4753 aa5.04□□□□□ -1.6
CASP4-203ENST00000444739 KRTAP10-8P60410 259 aa5.04□□□□□ -1.6
CASP4-203ENST00000444739 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
CASP4-203ENST00000444739 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
CASP4-203ENST00000444739 A0A1B0GVY2 172 aa4.92□□□□□ -1.62
CASP4-203ENST00000444739 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
CASP4-203ENST00000444739 M0QZ58 72 aa4.9□□□□□ -1.62
CASP4-203ENST00000444739 MYCBP2O75592 4640 aa4.88□□□□□ -1.63
CASP4-203ENST00000444739 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
CASP4-203ENST00000444739 LPAP08519 4548 aa4.8□□□□□ -1.64
CASP4-203ENST00000444739 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
CASP4-203ENST00000444739 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
CASP4-203ENST00000444739 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
CASP4-203ENST00000444739 KMT2CQ8NEZ4 4911 aaKnown RBP4.75□□□□□ -1.65
CASP4-203ENST00000444739 RYR2Q92736 4967 aa4.73□□□□□ -1.65
CASP4-203ENST00000444739 KRTAP4-5Q9BYR2 181 aa4.72□□□□□ -1.65
CASP4-203ENST00000444739 R4GN34 69 aa4.71□□□□□ -1.65
CASP4-203ENST00000444739 Q5VSD8 79 aa4.7□□□□□ -1.66
CASP4-203ENST00000444739 LRP2P98164 4655 aa4.7□□□□□ -1.66
CASP4-203ENST00000444739 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
CASP4-203ENST00000444739 KRTAP9-7A8MTY7 169 aa4.66□□□□□ -1.66
CASP4-203ENST00000444739 MT1HL1P0DM35 61 aa4.65□□□□□ -1.66
CASP4-203ENST00000444739 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
CASP4-203ENST00000444739 KRTAP17-1Q9BYP8 105 aa4.61□□□□□ -1.67
CASP4-203ENST00000444739 RYR1P21817 5038 aa4.6□□□□□ -1.67
CASP4-203ENST00000444739 PP632Q6XCG6 107 aa4.6□□□□□ -1.67
CASP4-203ENST00000444739 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
CASP4-203ENST00000444739 MUC17Q685J3 4493 aa4.55□□□□□ -1.68
CASP4-203ENST00000444739 KRTAP9-3Q9BYQ3 159 aa4.52□□□□□ -1.69
CASP4-203ENST00000444739 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
CASP4-203ENST00000444739 KIAA1109Q2LD37 5005 aa4.47□□□□□ -1.69
CASP4-203ENST00000444739 ABCA13Q86UQ4 5058 aa4.46□□□□□ -1.69
CASP4-203ENST00000444739 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
CASP4-203ENST00000444739 RYR3Q15413 4870 aa4.46□□□□□ -1.7
CASP4-203ENST00000444739 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
CASP4-203ENST00000444739 KRTAP4-1Q9BYQ7 146 aa4.43□□□□□ -1.7
CASP4-203ENST00000444739 SEC61BP60468 96 aaKnown RBP4.42□□□□□ -1.7
CASP4-203ENST00000444739 KRTAP19-2Q3LHN2 52 aa4.41□□□□□ -1.7
CASP4-203ENST00000444739 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
CASP4-203ENST00000444739 TNP1P09430 55 aa4.37□□□□□ -1.71
CASP4-203ENST00000444739 FLGP20930 4061 aaPredicted RBP4.32□□□□□ -1.72
CASP4-203ENST00000444739 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
CASP4-203ENST00000444739 HERC1Q15751 4861 aa4.27□□□□□ -1.73
CASP4-203ENST00000444739 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
CASP4-203ENST00000444739 MUC2Q02817 5179 aa4.18□□□□□ -1.74
CASP4-203ENST00000444739 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
CASP4-203ENST00000444739 PCLOQ9Y6V0 5065 aa4.15□□□□□ -1.75
CASP4-203ENST00000444739 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
CASP4-203ENST00000444739 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
CASP4-203ENST00000444739 BIRC6Q9NR09 4857 aa4.11□□□□□ -1.75
CASP4-203ENST00000444739 INE1O15225 51 aa4.09□□□□□ -1.75
CASP4-203ENST00000444739 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
CASP4-203ENST00000444739 HERC2O95714 4834 aa4.03□□□□□ -1.76
CASP4-203ENST00000444739 FAT4Q6V0I7 4981 aa3.95□□□□□ -1.78
CASP4-203ENST00000444739 KRTAP12-3P60328 96 aa3.92□□□□□ -1.78
CASP4-203ENST00000444739 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
CASP4-203ENST00000444739 HMCN2Q8NDA2 5059 aa3.9□□□□□ -1.78
CASP4-203ENST00000444739 MT1FP04733 61 aa3.9□□□□□ -1.79
CASP4-203ENST00000444739 UBR4Q5T4S7 5183 aa3.9□□□□□ -1.79
CASP4-203ENST00000444739 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
CASP4-203ENST00000444739 KRTAP19-8Q3LI54 63 aa3.89□□□□□ -1.79
CASP4-203ENST00000444739 MT2AP02795 61 aa3.88□□□□□ -1.79
CASP4-203ENST00000444739 MT1XP80297 61 aa3.88□□□□□ -1.79
CASP4-203ENST00000444739 M0R2T5 61 aa3.87□□□□□ -1.79
CASP4-203ENST00000444739 KRTAP10-10P60014 251 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms