RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 RPS29P62273 56 aaKnown RBP9.94□□□□□ -0.82
PAXBP1-204ENST00000443785 KRTAP10-8P60410 259 aa9.89□□□□□ -0.83
PAXBP1-204ENST00000443785 COX6B2Q6YFQ2 88 aa9.89□□□□□ -0.83
PAXBP1-204ENST00000443785 LPAP08519 4548 aa9.88□□□□□ -0.83
PAXBP1-204ENST00000443785 KIAA1109Q2LD37 5005 aa9.85□□□□□ -0.83
PAXBP1-204ENST00000443785 KRTAP21-3Q3LHN1 58 aa9.82□□□□□ -0.84
PAXBP1-204ENST00000443785 Q5VSD8 79 aa9.82□□□□□ -0.84
PAXBP1-204ENST00000443785 KRTAP17-1Q9BYP8 105 aa9.8□□□□□ -0.84
PAXBP1-204ENST00000443785 TNXBP22105 4242 aa9.78□□□□□ -0.84
PAXBP1-204ENST00000443785 RYR3Q15413 4870 aa9.77□□□□□ -0.85
PAXBP1-204ENST00000443785 KRTAP13-4Q3LI77 160 aa9.77□□□□□ -0.85
PAXBP1-204ENST00000443785 LRP2P98164 4655 aa9.73□□□□□ -0.85
PAXBP1-204ENST00000443785 KRTAP3-3Q9BYR6 98 aa9.72□□□□□ -0.85
PAXBP1-204ENST00000443785 XP32Q5T750 250 aa9.71□□□□□ -0.86
PAXBP1-204ENST00000443785 P0C880 135 aa9.69□□□□□ -0.86
PAXBP1-204ENST00000443785 K7ERS5 55 aa9.67□□□□□ -0.86
PAXBP1-204ENST00000443785 KRTAP10-6P60371 365 aaPredicted RBP9.67□□□□□ -0.86
PAXBP1-204ENST00000443785 KRTAP25-1Q3LHN0 102 aa9.66□□□□□ -0.86
PAXBP1-204ENST00000443785 RYR1P21817 5038 aa9.65□□□□□ -0.86
PAXBP1-204ENST00000443785 RPL37P61927 97 aaKnown RBP9.64□□□□□ -0.87
PAXBP1-204ENST00000443785 S4R3F8 94 aa9.64□□□□□ -0.87
PAXBP1-204ENST00000443785 C10orf95Q9H7T3 257 aa9.6□□□□□ -0.87
PAXBP1-204ENST00000443785 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
PAXBP1-204ENST00000443785 ABCA13Q86UQ4 5058 aa9.55□□□□□ -0.88
PAXBP1-204ENST00000443785 SPINT4Q6UDR6 99 aa9.54□□□□□ -0.88
PAXBP1-204ENST00000443785 EPPK1P58107 5090 aaKnown RBP9.49□□□□□ -0.89
PAXBP1-204ENST00000443785 ROMO1P60602 79 aa9.48□□□□□ -0.89
PAXBP1-204ENST00000443785 KRTAP12-2P59991 146 aa9.44□□□□□ -0.9
PAXBP1-204ENST00000443785 MT1HL1P0DM35 61 aa9.43□□□□□ -0.9
PAXBP1-204ENST00000443785 TPRXLQ17RH7 258 aa9.41□□□□□ -0.9
PAXBP1-204ENST00000443785 KRTAP4-5Q9BYR2 181 aa9.33□□□□□ -0.92
PAXBP1-204ENST00000443785 MUC2Q02817 5179 aa9.29□□□□□ -0.92
PAXBP1-204ENST00000443785 KRTAP12-1P59990 96 aa9.23□□□□□ -0.93
PAXBP1-204ENST00000443785 M0QZ58 72 aa9.17□□□□□ -0.94
PAXBP1-204ENST00000443785 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
PAXBP1-204ENST00000443785 R4GN34 69 aa9.08□□□□□ -0.96
PAXBP1-204ENST00000443785 KRTAP4-1Q9BYQ7 146 aa9.01□□□□□ -0.97
PAXBP1-204ENST00000443785 A0A0A0MQY5 61 aa8.98□□□□□ -0.97
PAXBP1-204ENST00000443785 NDUFAF8A1L188 74 aa8.95□□□□□ -0.98
PAXBP1-204ENST00000443785 HERC2O95714 4834 aa8.94□□□□□ -0.98
PAXBP1-204ENST00000443785 J3QL48 77 aa8.93□□□□□ -0.98
PAXBP1-204ENST00000443785 MUC17Q685J3 4493 aa8.86□□□□□ -0.99
PAXBP1-204ENST00000443785 KRTAP15-1Q3LI76 137 aa8.82□□□□□ -1
PAXBP1-204ENST00000443785 SEC61BP60468 96 aaKnown RBP8.81□□□□□ -1
PAXBP1-204ENST00000443785 FAT4Q6V0I7 4981 aa8.79□□□□□ -1
PAXBP1-204ENST00000443785 HERC1Q15751 4861 aa8.76□□□□□ -1.01
PAXBP1-204ENST00000443785 CAMK2N1Q7Z7J9 78 aa8.71□□□□□ -1.02
PAXBP1-204ENST00000443785 PCLOQ9Y6V0 5065 aa8.66□□□□□ -1.02
PAXBP1-204ENST00000443785 RNF213Q63HN8 5207 aa8.62□□□□□ -1.03
PAXBP1-204ENST00000443785 KRTAP19-2Q3LHN2 52 aa8.53□□□□□ -1.04
PAXBP1-204ENST00000443785 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
PAXBP1-204ENST00000443785 FLGP20930 4061 aaPredicted RBP8.38□□□□□ -1.07
PAXBP1-204ENST00000443785 BIRC6Q9NR09 4857 aa8.37□□□□□ -1.07
PAXBP1-204ENST00000443785 UBR4Q5T4S7 5183 aa8.35□□□□□ -1.07
PAXBP1-204ENST00000443785 M0R2T5 61 aa8.31□□□□□ -1.08
PAXBP1-204ENST00000443785 HMCN2Q8NDA2 5059 aa8.28□□□□□ -1.08
PAXBP1-204ENST00000443785 TNP1P09430 55 aa8.17□□□□□ -1.1
PAXBP1-204ENST00000443785 LUZP6Q538Z0 58 aa8.13□□□□□ -1.11
PAXBP1-204ENST00000443785 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
PAXBP1-204ENST00000443785 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
PAXBP1-204ENST00000443785 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
PAXBP1-204ENST00000443785 KRTAP19-1Q8IUB9 90 aa7.99□□□□□ -1.13
PAXBP1-204ENST00000443785 MT1HP80294 61 aa7.91□□□□□ -1.14
PAXBP1-204ENST00000443785 MT1FP04733 61 aa7.91□□□□□ -1.14
PAXBP1-204ENST00000443785 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
PAXBP1-204ENST00000443785 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
PAXBP1-204ENST00000443785 MT2AP02795 61 aa7.82□□□□□ -1.16
PAXBP1-204ENST00000443785 USH2AO75445 5202 aa7.81□□□□□ -1.16
PAXBP1-204ENST00000443785 KRTAP9-8Q9BYQ0 159 aa7.7□□□□□ -1.18
PAXBP1-204ENST00000443785 KMT2DO14686 5537 aa7.69□□□□□ -1.18
PAXBP1-204ENST00000443785 MT1BP07438 61 aa7.55□□□□□ -1.2
PAXBP1-204ENST00000443785 SPRR5A0A1B0GTR4 108 aa7.54□□□□□ -1.2
PAXBP1-204ENST00000443785 KRTAP10-5P60370 271 aa7.54□□□□□ -1.2
PAXBP1-204ENST00000443785 MT1XP80297 61 aa7.53□□□□□ -1.2
PAXBP1-204ENST00000443785 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
PAXBP1-204ENST00000443785 KRTAP10-7P60409 375 aaPredicted RBP7.51□□□□□ -1.21
PAXBP1-204ENST00000443785 KRTAP10-12P60413 245 aa7.44□□□□□ -1.22
PAXBP1-204ENST00000443785 KRTAP12-3P60328 96 aa7.41□□□□□ -1.22
PAXBP1-204ENST00000443785 KRTAP19-8Q3LI54 63 aa7.4□□□□□ -1.22
PAXBP1-204ENST00000443785 FSIP2Q5CZC0 6907 aa7.38□□□□□ -1.23
PAXBP1-204ENST00000443785 KRTAP8-1Q8IUC2 63 aa7.36□□□□□ -1.23
PAXBP1-204ENST00000443785 KRTAP9-3Q9BYQ3 159 aa7.33□□□□□ -1.24
PAXBP1-204ENST00000443785 KRTAP4-8A0A0G2JLE6 195 aa7.21□□□□□ -1.26
PAXBP1-204ENST00000443785 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.26
PAXBP1-204ENST00000443785 LCE2BO14633 110 aa7.2□□□□□ -1.26
PAXBP1-204ENST00000443785 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
PAXBP1-204ENST00000443785 PRO2289Q9P1D8 64 aa7.09□□□□□ -1.27
PAXBP1-204ENST00000443785 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
PAXBP1-204ENST00000443785 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.3
PAXBP1-204ENST00000443785 KRTAP9-6A8MVA2 160 aa6.86□□□□□ -1.31
PAXBP1-204ENST00000443785 INE1O15225 51 aa6.84□□□□□ -1.31
PAXBP1-204ENST00000443785 DSTQ03001 7570 aaKnown RBP6.78□□□□□ -1.32
PAXBP1-204ENST00000443785 SSPOA2VEC9 5147 aa6.76□□□□□ -1.33
PAXBP1-204ENST00000443785 LCE2AQ5TA79 106 aaPredicted RBP6.74□□□□□ -1.33
PAXBP1-204ENST00000443785 MUC12Q9UKN1 5478 aa6.72□□□□□ -1.33
PAXBP1-204ENST00000443785 KRTAP19-7Q3SYF9 63 aa6.7□□□□□ -1.34
PAXBP1-204ENST00000443785 FCGBPQ9Y6R7 5405 aaPredicted RBP6.65□□□□□ -1.34
PAXBP1-204ENST00000443785 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
PAXBP1-204ENST00000443785 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
PAXBP1-204ENST00000443785 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms