RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 KMT2AQ03164 3969 aa2.48□□□□□ -2.01
HERC1-201ENST00000443617 DYNC2H1Q8NCM8 4307 aaKnown RBP2.47□□□□□ -2.01
HERC1-201ENST00000443617 KRTAP10-8P60410 259 aa2.47□□□□□ -2.01
HERC1-201ENST00000443617 FRAS1Q86XX4 4008 aa2.45□□□□□ -2.02
HERC1-201ENST00000443617 VPS13DQ5THJ4 4388 aa2.44□□□□□ -2.02
HERC1-201ENST00000443617 DNAH6Q9C0G6 4158 aa2.44□□□□□ -2.02
HERC1-201ENST00000443617 DNAH17Q9UFH2 4485 aa2.42□□□□□ -2.02
HERC1-201ENST00000443617 TNP1P09430 55 aa2.42□□□□□ -2.02
HERC1-201ENST00000443617 DNAH9Q9NYC9 4486 aa2.41□□□□□ -2.02
HERC1-201ENST00000443617 PRKDCP78527 4128 aaKnown RBP2.39□□□□□ -2.03
HERC1-201ENST00000443617 DNAH8Q96JB1 4490 aa2.38□□□□□ -2.03
HERC1-201ENST00000443617 PLECQ15149 4684 aaKnown RBP2.38□□□□□ -2.03
HERC1-201ENST00000443617 PRO2289Q9P1D8 64 aa2.35□□□□□ -2.03
HERC1-201ENST00000443617 PKHD1P08F94 4074 aa2.34□□□□□ -2.03
HERC1-201ENST00000443617 KRTAP10-4P60372 401 aaPredicted RBP2.34□□□□□ -2.04
HERC1-201ENST00000443617 MYCBP2O75592 4640 aa2.3□□□□□ -2.04
HERC1-201ENST00000443617 DNAH5Q8TE73 4624 aa2.3□□□□□ -2.04
HERC1-201ENST00000443617 FLGP20930 4061 aaPredicted RBP2.3□□□□□ -2.04
HERC1-201ENST00000443617 A0A1B0GVY2 172 aa2.3□□□□□ -2.04
HERC1-201ENST00000443617 KRTAP23-1A1A580 65 aa2.28□□□□□ -2.05
HERC1-201ENST00000443617 LRP1BQ9NZR2 4599 aa2.28□□□□□ -2.05
HERC1-201ENST00000443617 SACSQ9NZJ4 4579 aa2.27□□□□□ -2.05
HERC1-201ENST00000443617 STARD9Q9P2P6 4700 aa2.27□□□□□ -2.05
HERC1-201ENST00000443617 PKHD1L1Q86WI1 4243 aa2.26□□□□□ -2.05
HERC1-201ENST00000443617 INE1O15225 51 aa2.26□□□□□ -2.05
HERC1-201ENST00000443617 FAT2Q9NYQ8 4349 aa2.26□□□□□ -2.05
HERC1-201ENST00000443617 KRTAP10-10P60014 251 aa2.23□□□□□ -2.05
HERC1-201ENST00000443617 APOBP04114 4563 aaKnown RBP2.22□□□□□ -2.05
HERC1-201ENST00000443617 LORP23490 312 aaPredicted RBP2.21□□□□□ -2.06
HERC1-201ENST00000443617 DYNC1H1Q14204 4646 aaKnown RBP2.2□□□□□ -2.06
HERC1-201ENST00000443617 FAT1Q14517 4588 aa2.2□□□□□ -2.06
HERC1-201ENST00000443617 MT1HL1P0DM35 61 aa2.2□□□□□ -2.06
HERC1-201ENST00000443617 SPRR5A0A1B0GTR4 108 aa2.17□□□□□ -2.06
HERC1-201ENST00000443617 TNXBP22105 4242 aa2.15□□□□□ -2.07
HERC1-201ENST00000443617 LRP1Q07954 4544 aaKnown RBP2.13□□□□□ -2.07
HERC1-201ENST00000443617 DNHD1Q96M86 4753 aa2.12□□□□□ -2.07
HERC1-201ENST00000443617 RYR1P21817 5038 aa2.11□□□□□ -2.07
HERC1-201ENST00000443617 PKD1P98161 4303 aa2.11□□□□□ -2.07
HERC1-201ENST00000443617 HSPG2P98160 4391 aa2.11□□□□□ -2.07
HERC1-201ENST00000443617 LCE3AQ5TA76 89 aa2.07□□□□□ -2.08
HERC1-201ENST00000443617 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
HERC1-201ENST00000443617 KRTAP12-3P60328 96 aa2.04□□□□□ -2.08
HERC1-201ENST00000443617 RYR3Q15413 4870 aa2.02□□□□□ -2.09
HERC1-201ENST00000443617 KRTAP17-1Q9BYP8 105 aa2.01□□□□□ -2.09
HERC1-201ENST00000443617 FAT3Q8TDW7 4589 aa1.99□□□□□ -2.09
HERC1-201ENST00000443617 SPRR2GQ9BYE4 73 aa1.99□□□□□ -2.09
HERC1-201ENST00000443617 KRTAP10-12P60413 245 aa1.98□□□□□ -2.09
HERC1-201ENST00000443617 KRTAP8-1Q8IUC2 63 aa1.98□□□□□ -2.09
HERC1-201ENST00000443617 KRTAP4-5Q9BYR2 181 aa1.97□□□□□ -2.09
HERC1-201ENST00000443617 LRP2P98164 4655 aa1.97□□□□□ -2.09
HERC1-201ENST00000443617 RYR2Q92736 4967 aa1.97□□□□□ -2.09
HERC1-201ENST00000443617 HYDINQ4G0P3 5121 aa1.96□□□□□ -2.1
HERC1-201ENST00000443617 MUC17Q685J3 4493 aa1.93□□□□□ -2.1
HERC1-201ENST00000443617 KRTAP19-2Q3LHN2 52 aa1.93□□□□□ -2.1
HERC1-201ENST00000443617 KMT2CQ8NEZ4 4911 aaKnown RBP1.93□□□□□ -2.1
HERC1-201ENST00000443617 KRTAP19-1Q8IUB9 90 aa1.92□□□□□ -2.1
HERC1-201ENST00000443617 KIAA1109Q2LD37 5005 aa1.92□□□□□ -2.1
HERC1-201ENST00000443617 LCE3CQ5T5A8 94 aa1.91□□□□□ -2.1
HERC1-201ENST00000443617 CRCT1Q9UGL9 99 aa1.9□□□□□ -2.1
HERC1-201ENST00000443617 MT1XP80297 61 aa1.87□□□□□ -2.11
HERC1-201ENST00000443617 KRTAP19-5Q3LI72 72 aa1.87□□□□□ -2.11
HERC1-201ENST00000443617 MT2AP02795 61 aa1.86□□□□□ -2.11
HERC1-201ENST00000443617 MT1FP04733 61 aa1.86□□□□□ -2.11
HERC1-201ENST00000443617 KRTAP19-4Q3LI73 84 aa1.86□□□□□ -2.11
HERC1-201ENST00000443617 KRTAP10-7P60409 375 aaPredicted RBP1.85□□□□□ -2.11
HERC1-201ENST00000443617 PCLOQ9Y6V0 5065 aa1.84□□□□□ -2.11
HERC1-201ENST00000443617 KRTAP10-5P60370 271 aa1.84□□□□□ -2.11
HERC1-201ENST00000443617 KRTAP19-8Q3LI54 63 aa1.83□□□□□ -2.12
HERC1-201ENST00000443617 LCE2CQ5TA81 110 aa1.82□□□□□ -2.12
HERC1-201ENST00000443617 BIRC6Q9NR09 4857 aa1.81□□□□□ -2.12
HERC1-201ENST00000443617 MT1HP80294 61 aa1.8□□□□□ -2.12
HERC1-201ENST00000443617 KRTAP2-3P0C7H8 128 aa1.8□□□□□ -2.12
HERC1-201ENST00000443617 KRTAP2-4Q9BYR9 128 aa1.8□□□□□ -2.12
HERC1-201ENST00000443617 KRTAP2-1Q9BYU5 128 aa1.8□□□□□ -2.12
HERC1-201ENST00000443617 HERC2O95714 4834 aa1.78□□□□□ -2.12
HERC1-201ENST00000443617 MT1BP07438 61 aa1.78□□□□□ -2.12
HERC1-201ENST00000443617 RNF213Q63HN8 5207 aa1.78□□□□□ -2.12
HERC1-201ENST00000443617 UBR4Q5T4S7 5183 aa1.78□□□□□ -2.13
HERC1-201ENST00000443617 EPPK1P58107 5090 aaKnown RBP1.77□□□□□ -2.13
HERC1-201ENST00000443617 HERC1Q15751 4861 aa1.77□□□□□ -2.13
HERC1-201ENST00000443617 KRTAP9-8Q9BYQ0 159 aa1.75□□□□□ -2.13
HERC1-201ENST00000443617 LPAP08519 4548 aa1.75□□□□□ -2.13
HERC1-201ENST00000443617 SPRR2FQ96RM1 72 aa1.75□□□□□ -2.13
HERC1-201ENST00000443617 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
HERC1-201ENST00000443617 KRTAP9-3Q9BYQ3 159 aa1.73□□□□□ -2.13
HERC1-201ENST00000443617 MUC2Q02817 5179 aa1.73□□□□□ -2.13
HERC1-201ENST00000443617 KRTAP9-6A8MVA2 160 aa1.72□□□□□ -2.13
HERC1-201ENST00000443617 ABCA13Q86UQ4 5058 aa1.72□□□□□ -2.13
HERC1-201ENST00000443617 MT1LQ93083 61 aa1.67□□□□□ -2.14
HERC1-201ENST00000443617 KRTAP4-7Q9BYR0 210 aa1.67□□□□□ -2.14
HERC1-201ENST00000443617 MT3P25713 68 aa1.66□□□□□ -2.14
HERC1-201ENST00000443617 SPRR2EP22531 72 aa1.66□□□□□ -2.14
HERC1-201ENST00000443617 SPRR2BP35325 72 aa1.66□□□□□ -2.14
HERC1-201ENST00000443617 SPRR2AP35326 72 aa1.66□□□□□ -2.14
HERC1-201ENST00000443617 SPRR2DP22532 72 aa1.66□□□□□ -2.14
HERC1-201ENST00000443617 KRTAP4-8A0A0G2JLE6 195 aa1.65□□□□□ -2.15
HERC1-201ENST00000443617 KRTAP4-8Q9BYQ9 185 aa1.65□□□□□ -2.15
HERC1-201ENST00000443617 HMCN2Q8NDA2 5059 aa1.63□□□□□ -2.15
HERC1-201ENST00000443617 MT1EP04732 61 aa1.62□□□□□ -2.15
HERC1-201ENST00000443617 FAT4Q6V0I7 4981 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms