RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 CASC2Q6XLA1 102 aa3.19□□□□□ -1.9
RFX3-206ENST00000442560 Q8N9L7 120 aa3.19□□□□□ -1.9
RFX3-206ENST00000442560 TMA7Q9Y2S6 64 aaKnown RBP3.19□□□□□ -1.9
RFX3-206ENST00000442560 KRTAP19-8Q3LI54 63 aa3.18□□□□□ -1.9
RFX3-206ENST00000442560 KRTAP10-5P60370 271 aa3.17□□□□□ -1.9
RFX3-206ENST00000442560 CSAG1Q6PB30 78 aa3.17□□□□□ -1.9
RFX3-206ENST00000442560 SPRR2GQ9BYE4 73 aa3.17□□□□□ -1.9
RFX3-206ENST00000442560 S4R3F8 94 aa3.17□□□□□ -1.9
RFX3-206ENST00000442560 H3BT86 120 aa3.15□□□□□ -1.91
RFX3-206ENST00000442560 CXCL6P80162 114 aa3.15□□□□□ -1.91
RFX3-206ENST00000442560 LCA10Q71F78 164 aa3.15□□□□□ -1.91
RFX3-206ENST00000442560 C1orf64Q8NEQ6 169 aa3.15□□□□□ -1.91
RFX3-206ENST00000442560 TSTD3H0UI37 97 aa3.14□□□□□ -1.91
RFX3-206ENST00000442560 BATFQ16520 125 aa3.14□□□□□ -1.91
RFX3-206ENST00000442560 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
RFX3-206ENST00000442560 KLKP1Q107X0 134 aa3.13□□□□□ -1.91
RFX3-206ENST00000442560 IMUPQ9GZP8 106 aa3.11□□□□□ -1.91
RFX3-206ENST00000442560 KMT2DO14686 5537 aa3.11□□□□□ -1.91
RFX3-206ENST00000442560 A0A1W2PPM0 123 aa3.09□□□□□ -1.91
RFX3-206ENST00000442560 TAX1BP3O14907 124 aa3.09□□□□□ -1.91
RFX3-206ENST00000442560 A0A087WVE0 104 aa3.07□□□□□ -1.92
RFX3-206ENST00000442560 KRTAP2-3P0C7H8 128 aa3.07□□□□□ -1.92
RFX3-206ENST00000442560 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
RFX3-206ENST00000442560 UBL5Q9BZL1 73 aa3.07□□□□□ -1.92
RFX3-206ENST00000442560 CRIPTQ9P021 101 aa3.06□□□□□ -1.92
RFX3-206ENST00000442560 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
RFX3-206ENST00000442560 SMIM6P0DI80 62 aa3.05□□□□□ -1.92
RFX3-206ENST00000442560 TP53AIP1Q9HCN2 124 aa3.05□□□□□ -1.92
RFX3-206ENST00000442560 SPCS1Q9Y6A9 102 aa3.05□□□□□ -1.92
RFX3-206ENST00000442560 SPRR2EP22531 72 aa3.03□□□□□ -1.92
RFX3-206ENST00000442560 SPRR2BP35325 72 aa3.03□□□□□ -1.92
RFX3-206ENST00000442560 SPRR2AP35326 72 aa3.03□□□□□ -1.92
RFX3-206ENST00000442560 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
RFX3-206ENST00000442560 CYP4F30PQ9H0H9 118 aa3.03□□□□□ -1.92
RFX3-206ENST00000442560 K7EP34 96 aa3□□□□□ -1.93
RFX3-206ENST00000442560 PRO0461Q9UI25 63 aa3□□□□□ -1.93
RFX3-206ENST00000442560 NDUFC1O43677 76 aa2.99□□□□□ -1.93
RFX3-206ENST00000442560 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
RFX3-206ENST00000442560 LOC101927531A0A1B0GV80 90 aa2.98□□□□□ -1.93
RFX3-206ENST00000442560 A8MUN3 132 aa2.98□□□□□ -1.93
RFX3-206ENST00000442560 H0YAA0 97 aa2.98□□□□□ -1.93
RFX3-206ENST00000442560 MT1XP80297 61 aa2.98□□□□□ -1.93
RFX3-206ENST00000442560 ADM2Q7Z4H4 148 aa2.98□□□□□ -1.93
RFX3-206ENST00000442560 KRTAP8-1Q8IUC2 63 aa2.98□□□□□ -1.93
RFX3-206ENST00000442560 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
RFX3-206ENST00000442560 TRAV22A0A0B4J277 110 aa2.97□□□□□ -1.93
RFX3-206ENST00000442560 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
RFX3-206ENST00000442560 PLAC4Q8WY50 150 aa2.96□□□□□ -1.94
RFX3-206ENST00000442560 MT3P25713 68 aa2.95□□□□□ -1.94
RFX3-206ENST00000442560 H0Y9P7 68 aa2.93□□□□□ -1.94
RFX3-206ENST00000442560 ACYP1P07311 99 aa2.93□□□□□ -1.94
RFX3-206ENST00000442560 SPRR2DP22532 72 aa2.93□□□□□ -1.94
RFX3-206ENST00000442560 COL5A1-AS1Q5SY13 56 aa2.93□□□□□ -1.94
RFX3-206ENST00000442560 LOC105371267A0A1B0GV96 52 aa2.92□□□□□ -1.94
RFX3-206ENST00000442560 KRTAP12-2P59991 146 aa2.92□□□□□ -1.94
RFX3-206ENST00000442560 UQCRQO14949 82 aa2.91□□□□□ -1.94
RFX3-206ENST00000442560 ETDBQ3ZM63 59 aa2.91□□□□□ -1.94
RFX3-206ENST00000442560 R4GN34 69 aa2.91□□□□□ -1.94
RFX3-206ENST00000442560 ATOX1O00244 68 aa2.9□□□□□ -1.95
RFX3-206ENST00000442560 F8W1H4 67 aa2.89□□□□□ -1.95
RFX3-206ENST00000442560 P0C880 135 aa2.89□□□□□ -1.95
RFX3-206ENST00000442560 HIST1H4AP62805 103 aaKnown RBP2.89□□□□□ -1.95
RFX3-206ENST00000442560 GTF2H5Q6ZYL4 71 aa2.89□□□□□ -1.95
RFX3-206ENST00000442560 M0QZ58 72 aa2.88□□□□□ -1.95
RFX3-206ENST00000442560 LINC00208Q96KT6 92 aa2.87□□□□□ -1.95
RFX3-206ENST00000442560 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
RFX3-206ENST00000442560 LINC01554Q52M75 96 aa2.86□□□□□ -1.95
RFX3-206ENST00000442560 KRTAP10-12P60413 245 aa2.85□□□□□ -1.95
RFX3-206ENST00000442560 ATP5EP2Q5VTU8 51 aa2.84□□□□□ -1.95
RFX3-206ENST00000442560 C20orf197Q8N268 126 aa2.84□□□□□ -1.95
RFX3-206ENST00000442560 MP68P56378 58 aa2.82□□□□□ -1.96
RFX3-206ENST00000442560 FAM240AA0A1B0GVK7 77 aa2.8□□□□□ -1.96
RFX3-206ENST00000442560 OCR1Q9BZK8 76 aa2.79□□□□□ -1.96
RFX3-206ENST00000442560 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
RFX3-206ENST00000442560 PCP4L1A6NKN8 68 aa2.77□□□□□ -1.97
RFX3-206ENST00000442560 MT-ATP8P03928 68 aa2.77□□□□□ -1.97
RFX3-206ENST00000442560 LINC00643Q86TS7 51 aa2.77□□□□□ -1.97
RFX3-206ENST00000442560 DMAC1Q96GE9 116 aa2.77□□□□□ -1.97
RFX3-206ENST00000442560 H3BPC8 53 aa2.74□□□□□ -1.97
RFX3-206ENST00000442560 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
RFX3-206ENST00000442560 DSTQ03001 7570 aaKnown RBP2.72□□□□□ -1.97
RFX3-206ENST00000442560 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
RFX3-206ENST00000442560 TRAV7A0A075B6U4 112 aa2.71□□□□□ -1.98
RFX3-206ENST00000442560 LCE3CQ5T5A8 94 aa2.7□□□□□ -1.98
RFX3-206ENST00000442560 SCGB1A1P11684 91 aa2.69□□□□□ -1.98
RFX3-206ENST00000442560 ACYP2P14621 99 aa2.69□□□□□ -1.98
RFX3-206ENST00000442560 SPTSSBQ8NFR3 76 aa2.68□□□□□ -1.98
RFX3-206ENST00000442560 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
RFX3-206ENST00000442560 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
RFX3-206ENST00000442560 CAMK2N1Q7Z7J9 78 aa2.66□□□□□ -1.98
RFX3-206ENST00000442560 CHKB-CPT1BH3BT56 60 aa2.65□□□□□ -1.99
RFX3-206ENST00000442560 MT1EP04732 61 aa2.65□□□□□ -1.99
RFX3-206ENST00000442560 KRTAP13-4Q3LI77 160 aa2.64□□□□□ -1.99
RFX3-206ENST00000442560 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
RFX3-206ENST00000442560 CYSTM1Q9H1C7 97 aa2.61□□□□□ -1.99
RFX3-206ENST00000442560 A0A1B0GV90 55 aa2.59□□□□□ -1.99
RFX3-206ENST00000442560 A0A0D9SG42 100 aa2.58□□□□□ -2
RFX3-206ENST00000442560 J3QR89 54 aa2.58□□□□□ -2
RFX3-206ENST00000442560 MT4P47944 62 aa2.58□□□□□ -2
RFX3-206ENST00000442560 KRTAP19-5Q3LI72 72 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms