RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 DNAH10Q8IVF4 4471 aa4.32□□□□□ -1.72
LIN54-202ENST00000442461 DNHD1Q96M86 4753 aa4.31□□□□□ -1.72
LIN54-202ENST00000442461 DNAH9Q9NYC9 4486 aa4.29□□□□□ -1.72
LIN54-202ENST00000442461 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
LIN54-202ENST00000442461 LYSTQ99698 3801 aa4.27□□□□□ -1.73
LIN54-202ENST00000442461 MT1HL1P0DM35 61 aa4.26□□□□□ -1.73
LIN54-202ENST00000442461 CMYA5Q8N3K9 4069 aa4.26□□□□□ -1.73
LIN54-202ENST00000442461 PRKDCP78527 4128 aaKnown RBP4.26□□□□□ -1.73
LIN54-202ENST00000442461 PLECQ15149 4684 aaKnown RBP4.25□□□□□ -1.73
LIN54-202ENST00000442461 KRTAP21-3Q3LHN1 58 aa4.24□□□□□ -1.73
LIN54-202ENST00000442461 STARD9Q9P2P6 4700 aa4.19□□□□□ -1.74
LIN54-202ENST00000442461 DNAH3Q8TD57 4116 aa4.18□□□□□ -1.74
LIN54-202ENST00000442461 DNAH7Q8WXX0 4024 aa4.15□□□□□ -1.74
LIN54-202ENST00000442461 KMT2AQ03164 3969 aa4.15□□□□□ -1.74
LIN54-202ENST00000442461 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
LIN54-202ENST00000442461 DNAH1Q9P2D7 4330 aa4.13□□□□□ -1.75
LIN54-202ENST00000442461 DNAH8Q96JB1 4490 aa4.13□□□□□ -1.75
LIN54-202ENST00000442461 DNAH11Q96DT5 4516 aa4.09□□□□□ -1.75
LIN54-202ENST00000442461 VPS13DQ5THJ4 4388 aa4.07□□□□□ -1.76
LIN54-202ENST00000442461 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
LIN54-202ENST00000442461 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
LIN54-202ENST00000442461 FAT1Q14517 4588 aa4.05□□□□□ -1.76
LIN54-202ENST00000442461 KRTAP8-1Q8IUC2 63 aa4.05□□□□□ -1.76
LIN54-202ENST00000442461 FRAS1Q86XX4 4008 aa4.04□□□□□ -1.76
LIN54-202ENST00000442461 DNAH17Q9UFH2 4485 aa4.02□□□□□ -1.77
LIN54-202ENST00000442461 DNAH2Q9P225 4427 aa4.01□□□□□ -1.77
LIN54-202ENST00000442461 LRP1BQ9NZR2 4599 aa4□□□□□ -1.77
LIN54-202ENST00000442461 DNAH6Q9C0G6 4158 aa3.99□□□□□ -1.77
LIN54-202ENST00000442461 HYDINQ4G0P3 5121 aa3.97□□□□□ -1.77
LIN54-202ENST00000442461 DYNC2H1Q8NCM8 4307 aaKnown RBP3.96□□□□□ -1.78
LIN54-202ENST00000442461 DNAH5Q8TE73 4624 aa3.96□□□□□ -1.78
LIN54-202ENST00000442461 SPRR2GQ9BYE4 73 aa3.93□□□□□ -1.78
LIN54-202ENST00000442461 HECTD4Q9Y4D8 3996 aa3.93□□□□□ -1.78
LIN54-202ENST00000442461 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
LIN54-202ENST00000442461 PKHD1P08F94 4074 aa3.9□□□□□ -1.78
LIN54-202ENST00000442461 DYNC1H1Q14204 4646 aaKnown RBP3.88□□□□□ -1.79
LIN54-202ENST00000442461 LCE2DQ5TA82 110 aaPredicted RBP3.88□□□□□ -1.79
LIN54-202ENST00000442461 KRTAP4-1Q9BYQ7 146 aa3.88□□□□□ -1.79
LIN54-202ENST00000442461 VPS13BQ7Z7G8 4022 aa3.87□□□□□ -1.79
LIN54-202ENST00000442461 SACSQ9NZJ4 4579 aa3.87□□□□□ -1.79
LIN54-202ENST00000442461 KMT2CQ8NEZ4 4911 aaKnown RBP3.87□□□□□ -1.79
LIN54-202ENST00000442461 FAT2Q9NYQ8 4349 aa3.81□□□□□ -1.8
LIN54-202ENST00000442461 KIAA1109Q2LD37 5005 aa3.81□□□□□ -1.8
LIN54-202ENST00000442461 APOBP04114 4563 aaKnown RBP3.81□□□□□ -1.8
LIN54-202ENST00000442461 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
LIN54-202ENST00000442461 KRTAP4-5Q9BYR2 181 aa3.78□□□□□ -1.8
LIN54-202ENST00000442461 MYCBP2O75592 4640 aa3.78□□□□□ -1.8
LIN54-202ENST00000442461 LRP1Q07954 4544 aaKnown RBP3.77□□□□□ -1.81
LIN54-202ENST00000442461 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
LIN54-202ENST00000442461 PKD1P98161 4303 aa3.76□□□□□ -1.81
LIN54-202ENST00000442461 RYR3Q15413 4870 aa3.76□□□□□ -1.81
LIN54-202ENST00000442461 RYR2Q92736 4967 aa3.76□□□□□ -1.81
LIN54-202ENST00000442461 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
LIN54-202ENST00000442461 RYR1P21817 5038 aa3.73□□□□□ -1.81
LIN54-202ENST00000442461 MT2AP02795 61 aa3.72□□□□□ -1.81
LIN54-202ENST00000442461 FAT3Q8TDW7 4589 aa3.71□□□□□ -1.82
LIN54-202ENST00000442461 KRTAP17-1Q9BYP8 105 aa3.69□□□□□ -1.82
LIN54-202ENST00000442461 KRTAP19-1Q8IUB9 90 aa3.69□□□□□ -1.82
LIN54-202ENST00000442461 MT1FP04733 61 aa3.66□□□□□ -1.82
LIN54-202ENST00000442461 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
LIN54-202ENST00000442461 MT1HP80294 61 aa3.62□□□□□ -1.83
LIN54-202ENST00000442461 HSPG2P98160 4391 aa3.62□□□□□ -1.83
LIN54-202ENST00000442461 EPPK1P58107 5090 aaKnown RBP3.61□□□□□ -1.83
LIN54-202ENST00000442461 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
LIN54-202ENST00000442461 MT1XP80297 61 aa3.57□□□□□ -1.84
LIN54-202ENST00000442461 LRP2P98164 4655 aa3.54□□□□□ -1.84
LIN54-202ENST00000442461 PKHD1L1Q86WI1 4243 aa3.53□□□□□ -1.84
LIN54-202ENST00000442461 HERC2O95714 4834 aa3.52□□□□□ -1.85
LIN54-202ENST00000442461 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
LIN54-202ENST00000442461 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
LIN54-202ENST00000442461 LPAP08519 4548 aa3.48□□□□□ -1.85
LIN54-202ENST00000442461 TNXBP22105 4242 aa3.47□□□□□ -1.85
LIN54-202ENST00000442461 MT1BP07438 61 aa3.46□□□□□ -1.86
LIN54-202ENST00000442461 LCE3BQ5TA77 95 aa3.46□□□□□ -1.86
LIN54-202ENST00000442461 ABCA13Q86UQ4 5058 aa3.45□□□□□ -1.86
LIN54-202ENST00000442461 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
LIN54-202ENST00000442461 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
LIN54-202ENST00000442461 MT1GP13640 62 aa3.39□□□□□ -1.87
LIN54-202ENST00000442461 MUC2Q02817 5179 aa3.37□□□□□ -1.87
LIN54-202ENST00000442461 BIRC6Q9NR09 4857 aa3.36□□□□□ -1.87
LIN54-202ENST00000442461 HERC1Q15751 4861 aa3.36□□□□□ -1.87
LIN54-202ENST00000442461 KRTAP4-8A0A0G2JLE6 195 aa3.35□□□□□ -1.87
LIN54-202ENST00000442461 KRTAP4-8Q9BYQ9 185 aa3.35□□□□□ -1.87
LIN54-202ENST00000442461 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
LIN54-202ENST00000442461 PCLOQ9Y6V0 5065 aa3.32□□□□□ -1.88
LIN54-202ENST00000442461 KRTAP2-3P0C7H8 128 aa3.31□□□□□ -1.88
LIN54-202ENST00000442461 KRTAP2-4Q9BYR9 128 aa3.31□□□□□ -1.88
LIN54-202ENST00000442461 KRTAP2-1Q9BYU5 128 aa3.31□□□□□ -1.88
LIN54-202ENST00000442461 KRTAP9-8Q9BYQ0 159 aa3.31□□□□□ -1.88
LIN54-202ENST00000442461 PRM1P04553 51 aa3.3□□□□□ -1.88
LIN54-202ENST00000442461 FSIP2Q5CZC0 6907 aa3.29□□□□□ -1.88
LIN54-202ENST00000442461 SPRR2FQ96RM1 72 aa3.29□□□□□ -1.88
LIN54-202ENST00000442461 MT1LQ93083 61 aa3.28□□□□□ -1.88
LIN54-202ENST00000442461 RNF213Q63HN8 5207 aa3.27□□□□□ -1.89
LIN54-202ENST00000442461 KRTAP19-2Q3LHN2 52 aa3.27□□□□□ -1.89
LIN54-202ENST00000442461 LCE2CQ5TA81 110 aa3.24□□□□□ -1.89
LIN54-202ENST00000442461 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
LIN54-202ENST00000442461 MUC17Q685J3 4493 aa3.21□□□□□ -1.9
LIN54-202ENST00000442461 UBR4Q5T4S7 5183 aa3.2□□□□□ -1.9
LIN54-202ENST00000442461 KRTAP9-3Q9BYQ3 159 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms