RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 KRTAP10-4P60372 401 aaPredicted RBP8.95□□□□□ -0.98
PMS1-213ENST00000441310 C9orf92A6NGG3 77 aa8.93□□□□□ -0.98
PMS1-213ENST00000441310 A0A0D9SG42 100 aa8.93□□□□□ -0.98
PMS1-213ENST00000441310 C20orf166-AS1Q96NR2 134 aa8.92□□□□□ -0.98
PMS1-213ENST00000441310 RPL37P61927 97 aaKnown RBP8.89□□□□□ -0.99
PMS1-213ENST00000441310 LRP1Q07954 4544 aaKnown RBP8.87□□□□□ -0.99
PMS1-213ENST00000441310 KRTAP15-1Q3LI76 137 aa8.84□□□□□ -0.99
PMS1-213ENST00000441310 RYR3Q15413 4870 aa8.84□□□□□ -0.99
PMS1-213ENST00000441310 KRTAP13-4Q3LI77 160 aa8.8□□□□□ -1
PMS1-213ENST00000441310 Q5VSD8 79 aa8.78□□□□□ -1
PMS1-213ENST00000441310 RPS29P62273 56 aaKnown RBP8.76□□□□□ -1.01
PMS1-213ENST00000441310 KRTAP17-1Q9BYP8 105 aa8.75□□□□□ -1.01
PMS1-213ENST00000441310 KIAA1109Q2LD37 5005 aa8.75□□□□□ -1.01
PMS1-213ENST00000441310 PKHD1L1Q86WI1 4243 aa8.74□□□□□ -1.01
PMS1-213ENST00000441310 HSPG2P98160 4391 aa8.73□□□□□ -1.01
PMS1-213ENST00000441310 KRTAP10-6P60371 365 aaPredicted RBP8.72□□□□□ -1.01
PMS1-213ENST00000441310 MYCBP2O75592 4640 aa8.67□□□□□ -1.02
PMS1-213ENST00000441310 A0A0A0MQY5 61 aa8.66□□□□□ -1.02
PMS1-213ENST00000441310 RYR1P21817 5038 aa8.63□□□□□ -1.03
PMS1-213ENST00000441310 KRTAP10-8P60410 259 aa8.61□□□□□ -1.03
PMS1-213ENST00000441310 S4R3F8 94 aa8.61□□□□□ -1.03
PMS1-213ENST00000441310 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
PMS1-213ENST00000441310 TNXBP22105 4242 aa8.58□□□□□ -1.04
PMS1-213ENST00000441310 EPPK1P58107 5090 aaKnown RBP8.57□□□□□ -1.04
PMS1-213ENST00000441310 KRTAP12-2P59991 146 aa8.57□□□□□ -1.04
PMS1-213ENST00000441310 KRTAP3-3Q9BYR6 98 aa8.57□□□□□ -1.04
PMS1-213ENST00000441310 FAT3Q8TDW7 4589 aa8.55□□□□□ -1.04
PMS1-213ENST00000441310 MT1HL1P0DM35 61 aa8.45□□□□□ -1.06
PMS1-213ENST00000441310 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
PMS1-213ENST00000441310 KRTAP12-1P59990 96 aa8.41□□□□□ -1.06
PMS1-213ENST00000441310 XP32Q5T750 250 aa8.4□□□□□ -1.07
PMS1-213ENST00000441310 LUZP6Q538Z0 58 aa8.37□□□□□ -1.07
PMS1-213ENST00000441310 LRP2P98164 4655 aa8.3□□□□□ -1.08
PMS1-213ENST00000441310 ABCA13Q86UQ4 5058 aa8.27□□□□□ -1.08
PMS1-213ENST00000441310 LPAP08519 4548 aa8.25□□□□□ -1.09
PMS1-213ENST00000441310 PLAC4Q8WY50 150 aa8.2□□□□□ -1.1
PMS1-213ENST00000441310 M0QZ58 72 aa8.11□□□□□ -1.11
PMS1-213ENST00000441310 J3QL48 77 aa8.09□□□□□ -1.11
PMS1-213ENST00000441310 HERC2O95714 4834 aa8.08□□□□□ -1.12
PMS1-213ENST00000441310 R4GN34 69 aa7.91□□□□□ -1.14
PMS1-213ENST00000441310 KRTAP4-1Q9BYQ7 146 aa7.86□□□□□ -1.15
PMS1-213ENST00000441310 BIRC6Q9NR09 4857 aa7.85□□□□□ -1.15
PMS1-213ENST00000441310 MUC2Q02817 5179 aa7.85□□□□□ -1.15
PMS1-213ENST00000441310 SEC61BP60468 96 aaKnown RBP7.84□□□□□ -1.15
PMS1-213ENST00000441310 HERC1Q15751 4861 aa7.79□□□□□ -1.16
PMS1-213ENST00000441310 PCLOQ9Y6V0 5065 aa7.76□□□□□ -1.17
PMS1-213ENST00000441310 LORP23490 312 aaPredicted RBP7.73□□□□□ -1.17
PMS1-213ENST00000441310 MUC17Q685J3 4493 aa7.72□□□□□ -1.17
PMS1-213ENST00000441310 PP632Q6XCG6 107 aa7.67□□□□□ -1.18
PMS1-213ENST00000441310 CAMK2N1Q7Z7J9 78 aa7.63□□□□□ -1.19
PMS1-213ENST00000441310 KRTAP19-2Q3LHN2 52 aa7.55□□□□□ -1.2
PMS1-213ENST00000441310 HMCN2Q8NDA2 5059 aa7.51□□□□□ -1.21
PMS1-213ENST00000441310 FAT4Q6V0I7 4981 aa7.47□□□□□ -1.21
PMS1-213ENST00000441310 RNF213Q63HN8 5207 aa7.45□□□□□ -1.22
PMS1-213ENST00000441310 UBR4Q5T4S7 5183 aa7.39□□□□□ -1.23
PMS1-213ENST00000441310 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
PMS1-213ENST00000441310 FLGP20930 4061 aaPredicted RBP7.37□□□□□ -1.23
PMS1-213ENST00000441310 TNP1P09430 55 aa7.33□□□□□ -1.24
PMS1-213ENST00000441310 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
PMS1-213ENST00000441310 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
PMS1-213ENST00000441310 M0R2T5 61 aa7.24□□□□□ -1.25
PMS1-213ENST00000441310 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
PMS1-213ENST00000441310 MT1HP80294 61 aa7.09□□□□□ -1.27
PMS1-213ENST00000441310 INE1O15225 51 aa7.01□□□□□ -1.29
PMS1-213ENST00000441310 KRTAP10-10P60014 251 aa6.99□□□□□ -1.29
PMS1-213ENST00000441310 MT1FP04733 61 aa6.94□□□□□ -1.3
PMS1-213ENST00000441310 KRTAP19-1Q8IUB9 90 aa6.93□□□□□ -1.3
PMS1-213ENST00000441310 MT2AP02795 61 aa6.92□□□□□ -1.3
PMS1-213ENST00000441310 LCE3AQ5TA76 89 aa6.92□□□□□ -1.3
PMS1-213ENST00000441310 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
PMS1-213ENST00000441310 SPRR2GQ9BYE4 73 aa6.86□□□□□ -1.31
PMS1-213ENST00000441310 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
PMS1-213ENST00000441310 MT1BP07438 61 aa6.61□□□□□ -1.35
PMS1-213ENST00000441310 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.36
PMS1-213ENST00000441310 KRTAP19-8Q3LI54 63 aa6.58□□□□□ -1.36
PMS1-213ENST00000441310 USH2AO75445 5202 aa6.55□□□□□ -1.36
PMS1-213ENST00000441310 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
PMS1-213ENST00000441310 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
PMS1-213ENST00000441310 MT1XP80297 61 aa6.49□□□□□ -1.37
PMS1-213ENST00000441310 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
PMS1-213ENST00000441310 LCE2BO14633 110 aa6.43□□□□□ -1.38
PMS1-213ENST00000441310 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
PMS1-213ENST00000441310 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
PMS1-213ENST00000441310 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
PMS1-213ENST00000441310 KMT2DO14686 5537 aa6.28□□□□□ -1.4
PMS1-213ENST00000441310 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
PMS1-213ENST00000441310 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
PMS1-213ENST00000441310 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
PMS1-213ENST00000441310 KRTAP19-5Q3LI72 72 aa6.07□□□□□ -1.44
PMS1-213ENST00000441310 KRTAP9-6A8MVA2 160 aa6.05□□□□□ -1.44
PMS1-213ENST00000441310 SSPOA2VEC9 5147 aa6.01□□□□□ -1.45
PMS1-213ENST00000441310 KRTAP2-3P0C7H8 128 aa5.94□□□□□ -1.46
PMS1-213ENST00000441310 KRTAP2-4Q9BYR9 128 aa5.94□□□□□ -1.46
PMS1-213ENST00000441310 KRTAP2-1Q9BYU5 128 aa5.94□□□□□ -1.46
PMS1-213ENST00000441310 KRTAP4-7Q9BYR0 210 aa5.85□□□□□ -1.47
PMS1-213ENST00000441310 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
PMS1-213ENST00000441310 KRTAP19-6Q3LI70 58 aa5.74□□□□□ -1.49
PMS1-213ENST00000441310 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
PMS1-213ENST00000441310 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
PMS1-213ENST00000441310 MT1EP04732 61 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms