RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 CSMD2Q7Z408 3487 aa2.69□□□□□ -1.98
USP46-201ENST00000441222 ALMS1Q8TCU4 4167 aa2.68□□□□□ -1.98
USP46-201ENST00000441222 DNAH1Q9P2D7 4330 aa2.68□□□□□ -1.98
USP46-201ENST00000441222 ANK3Q12955 4377 aaKnown RBP2.67□□□□□ -1.98
USP46-201ENST00000441222 AKAP9Q99996 3911 aa2.66□□□□□ -1.98
USP46-201ENST00000441222 KRTAP4-5Q9BYR2 181 aa2.65□□□□□ -1.98
USP46-201ENST00000441222 BSNQ9UPA5 3926 aa2.65□□□□□ -1.99
USP46-201ENST00000441222 LORP23490 312 aaPredicted RBP2.64□□□□□ -1.99
USP46-201ENST00000441222 HUWE1Q7Z6Z7 4374 aaKnown RBP2.63□□□□□ -1.99
USP46-201ENST00000441222 SPRR2GQ9BYE4 73 aa2.62□□□□□ -1.99
USP46-201ENST00000441222 DNAH2Q9P225 4427 aa2.58□□□□□ -2
USP46-201ENST00000441222 LCE3CQ5T5A8 94 aa2.56□□□□□ -2
USP46-201ENST00000441222 SPRR2FQ96RM1 72 aa2.55□□□□□ -2
USP46-201ENST00000441222 MT1HP80294 61 aa2.54□□□□□ -2
USP46-201ENST00000441222 KRTAP19-5Q3LI72 72 aa2.52□□□□□ -2.01
USP46-201ENST00000441222 MT2AP02795 61 aa2.51□□□□□ -2.01
USP46-201ENST00000441222 ZNF469Q96JG9 3925 aaPredicted RBP2.51□□□□□ -2.01
USP46-201ENST00000441222 DNAH3Q8TD57 4116 aa2.49□□□□□ -2.01
USP46-201ENST00000441222 MT3P25713 68 aa2.49□□□□□ -2.01
USP46-201ENST00000441222 DNAH7Q8WXX0 4024 aa2.47□□□□□ -2.01
USP46-201ENST00000441222 CMYA5Q8N3K9 4069 aa2.46□□□□□ -2.02
USP46-201ENST00000441222 VPS13BQ7Z7G8 4022 aa2.45□□□□□ -2.02
USP46-201ENST00000441222 KRTAP4-1Q9BYQ7 146 aa2.45□□□□□ -2.02
USP46-201ENST00000441222 RYR1P21817 5038 aa2.45□□□□□ -2.02
USP46-201ENST00000441222 LYSTQ99698 3801 aa2.44□□□□□ -2.02
USP46-201ENST00000441222 MT1FP04733 61 aa2.42□□□□□ -2.02
USP46-201ENST00000441222 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
USP46-201ENST00000441222 DNAH9Q9NYC9 4486 aa2.4□□□□□ -2.02
USP46-201ENST00000441222 SPRR2EP22531 72 aa2.4□□□□□ -2.03
USP46-201ENST00000441222 SPRR2BP35325 72 aa2.4□□□□□ -2.03
USP46-201ENST00000441222 SPRR2AP35326 72 aa2.4□□□□□ -2.03
USP46-201ENST00000441222 DNAH10Q8IVF4 4471 aa2.4□□□□□ -2.03
USP46-201ENST00000441222 PCLOQ9Y6V0 5065 aa2.39□□□□□ -2.03
USP46-201ENST00000441222 FAT2Q9NYQ8 4349 aa2.39□□□□□ -2.03
USP46-201ENST00000441222 KMT2AQ03164 3969 aa2.39□□□□□ -2.03
USP46-201ENST00000441222 DNAH6Q9C0G6 4158 aa2.39□□□□□ -2.03
USP46-201ENST00000441222 ANK2Q01484 3957 aa2.38□□□□□ -2.03
USP46-201ENST00000441222 DNAH17Q9UFH2 4485 aa2.38□□□□□ -2.03
USP46-201ENST00000441222 KRTAP19-8Q3LI54 63 aa2.37□□□□□ -2.03
USP46-201ENST00000441222 LCE2BO14633 110 aa2.36□□□□□ -2.03
USP46-201ENST00000441222 LCE3BQ5TA77 95 aa2.36□□□□□ -2.03
USP46-201ENST00000441222 HECTD4Q9Y4D8 3996 aa2.36□□□□□ -2.03
USP46-201ENST00000441222 DYNC2H1Q8NCM8 4307 aaKnown RBP2.35□□□□□ -2.03
USP46-201ENST00000441222 FRAS1Q86XX4 4008 aa2.34□□□□□ -2.03
USP46-201ENST00000441222 DNAH8Q96JB1 4490 aa2.34□□□□□ -2.03
USP46-201ENST00000441222 SPRR2DP22532 72 aa2.33□□□□□ -2.04
USP46-201ENST00000441222 DNAH11Q96DT5 4516 aa2.33□□□□□ -2.04
USP46-201ENST00000441222 MT1GP13640 62 aa2.31□□□□□ -2.04
USP46-201ENST00000441222 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
USP46-201ENST00000441222 VPS13DQ5THJ4 4388 aa2.3□□□□□ -2.04
USP46-201ENST00000441222 DNHD1Q96M86 4753 aa2.3□□□□□ -2.04
USP46-201ENST00000441222 KRTAP19-1Q8IUB9 90 aa2.29□□□□□ -2.04
USP46-201ENST00000441222 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.05
USP46-201ENST00000441222 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
USP46-201ENST00000441222 LRP1Q07954 4544 aaKnown RBP2.27□□□□□ -2.05
USP46-201ENST00000441222 MT1XP80297 61 aa2.27□□□□□ -2.05
USP46-201ENST00000441222 PRKDCP78527 4128 aaKnown RBP2.26□□□□□ -2.05
USP46-201ENST00000441222 DNAH5Q8TE73 4624 aa2.26□□□□□ -2.05
USP46-201ENST00000441222 FAT1Q14517 4588 aa2.25□□□□□ -2.05
USP46-201ENST00000441222 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
USP46-201ENST00000441222 PLECQ15149 4684 aaKnown RBP2.22□□□□□ -2.05
USP46-201ENST00000441222 LCE2CQ5TA81 110 aa2.21□□□□□ -2.06
USP46-201ENST00000441222 MT1LQ93083 61 aa2.21□□□□□ -2.06
USP46-201ENST00000441222 HYDINQ4G0P3 5121 aa2.2□□□□□ -2.06
USP46-201ENST00000441222 MT1BP07438 61 aa2.18□□□□□ -2.06
USP46-201ENST00000441222 LRP1BQ9NZR2 4599 aa2.18□□□□□ -2.06
USP46-201ENST00000441222 KRTAP9-8Q9BYQ0 159 aa2.17□□□□□ -2.06
USP46-201ENST00000441222 KRTAP19-3Q7Z4W3 81 aa2.17□□□□□ -2.06
USP46-201ENST00000441222 BIRC6Q9NR09 4857 aa2.16□□□□□ -2.06
USP46-201ENST00000441222 LCE2DQ5TA82 110 aaPredicted RBP2.16□□□□□ -2.06
USP46-201ENST00000441222 UBR4Q5T4S7 5183 aa2.16□□□□□ -2.06
USP46-201ENST00000441222 ABCA13Q86UQ4 5058 aa2.15□□□□□ -2.07
USP46-201ENST00000441222 STARD9Q9P2P6 4700 aa2.15□□□□□ -2.07
USP46-201ENST00000441222 EPPK1P58107 5090 aaKnown RBP2.14□□□□□ -2.07
USP46-201ENST00000441222 RYR2Q92736 4967 aa2.14□□□□□ -2.07
USP46-201ENST00000441222 APOBP04114 4563 aaKnown RBP2.13□□□□□ -2.07
USP46-201ENST00000441222 KRTAP9-3Q9BYQ3 159 aa2.13□□□□□ -2.07
USP46-201ENST00000441222 KRTAP4-8A0A0G2JLE6 195 aa2.12□□□□□ -2.07
USP46-201ENST00000441222 KRTAP4-8Q9BYQ9 185 aa2.12□□□□□ -2.07
USP46-201ENST00000441222 SACSQ9NZJ4 4579 aa2.12□□□□□ -2.07
USP46-201ENST00000441222 RYR3Q15413 4870 aa2.12□□□□□ -2.07
USP46-201ENST00000441222 DYNC1H1Q14204 4646 aaKnown RBP2.11□□□□□ -2.07
USP46-201ENST00000441222 PKHD1L1Q86WI1 4243 aa2.11□□□□□ -2.07
USP46-201ENST00000441222 FAT3Q8TDW7 4589 aa2.09□□□□□ -2.08
USP46-201ENST00000441222 PKD1P98161 4303 aa2.09□□□□□ -2.08
USP46-201ENST00000441222 MT1EP04732 61 aa2.08□□□□□ -2.08
USP46-201ENST00000441222 KIAA1109Q2LD37 5005 aa2.06□□□□□ -2.08
USP46-201ENST00000441222 HERC2O95714 4834 aa2.06□□□□□ -2.08
USP46-201ENST00000441222 PRM1P04553 51 aa2.06□□□□□ -2.08
USP46-201ENST00000441222 PKHD1P08F94 4074 aa2.06□□□□□ -2.08
USP46-201ENST00000441222 MT1MQ8N339 61 aa2.02□□□□□ -2.09
USP46-201ENST00000441222 MT4P47944 62 aa2.02□□□□□ -2.09
USP46-201ENST00000441222 HSPG2P98160 4391 aa2.01□□□□□ -2.09
USP46-201ENST00000441222 HMCN2Q8NDA2 5059 aa2.01□□□□□ -2.09
USP46-201ENST00000441222 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
USP46-201ENST00000441222 LCE1DQ5T752 114 aa2□□□□□ -2.09
USP46-201ENST00000441222 LCE4AQ5TA78 99 aa1.99□□□□□ -2.09
USP46-201ENST00000441222 RNF213Q63HN8 5207 aa1.98□□□□□ -2.09
USP46-201ENST00000441222 KRTAP19-6Q3LI70 58 aa1.98□□□□□ -2.09
USP46-201ENST00000441222 MYCBP2O75592 4640 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms