RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 LRP1Q07954 4544 aaKnown RBP6.55□□□□□ -1.36
PCGF3-207ENST00000440452 TPRXLQ17RH7 258 aa6.53□□□□□ -1.36
PCGF3-207ENST00000440452 Q5VSD8 79 aa6.52□□□□□ -1.37
PCGF3-207ENST00000440452 RPS29P62273 56 aaKnown RBP6.51□□□□□ -1.37
PCGF3-207ENST00000440452 KMT2CQ8NEZ4 4911 aaKnown RBP6.5□□□□□ -1.37
PCGF3-207ENST00000440452 A0A1B0GVY2 172 aa6.49□□□□□ -1.37
PCGF3-207ENST00000440452 APOBP04114 4563 aaKnown RBP6.49□□□□□ -1.37
PCGF3-207ENST00000440452 KRTAP10-4P60372 401 aaPredicted RBP6.45□□□□□ -1.38
PCGF3-207ENST00000440452 KRTAP13-4Q3LI77 160 aa6.42□□□□□ -1.38
PCGF3-207ENST00000440452 S4R3F8 94 aa6.41□□□□□ -1.38
PCGF3-207ENST00000440452 FAT3Q8TDW7 4589 aa6.41□□□□□ -1.38
PCGF3-207ENST00000440452 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
PCGF3-207ENST00000440452 A0A0A0MQY5 61 aa6.37□□□□□ -1.39
PCGF3-207ENST00000440452 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
PCGF3-207ENST00000440452 XP32Q5T750 250 aa6.35□□□□□ -1.39
PCGF3-207ENST00000440452 RYR2Q92736 4967 aa6.33□□□□□ -1.4
PCGF3-207ENST00000440452 KRTAP12-2P59991 146 aa6.31□□□□□ -1.4
PCGF3-207ENST00000440452 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
PCGF3-207ENST00000440452 LUZP6Q538Z0 58 aa6.3□□□□□ -1.4
PCGF3-207ENST00000440452 HSPG2P98160 4391 aa6.3□□□□□ -1.4
PCGF3-207ENST00000440452 KRTAP21-3Q3LHN1 58 aa6.28□□□□□ -1.4
PCGF3-207ENST00000440452 PKHD1L1Q86WI1 4243 aa6.28□□□□□ -1.4
PCGF3-207ENST00000440452 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.4
PCGF3-207ENST00000440452 RYR3Q15413 4870 aa6.26□□□□□ -1.41
PCGF3-207ENST00000440452 RYR1P21817 5038 aa6.23□□□□□ -1.41
PCGF3-207ENST00000440452 KRTAP17-1Q9BYP8 105 aa6.22□□□□□ -1.41
PCGF3-207ENST00000440452 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
PCGF3-207ENST00000440452 LRP2P98164 4655 aa6.2□□□□□ -1.42
PCGF3-207ENST00000440452 M0QZ58 72 aa6.2□□□□□ -1.42
PCGF3-207ENST00000440452 LPAP08519 4548 aa6.19□□□□□ -1.42
PCGF3-207ENST00000440452 KRTAP3-2Q9BYR7 98 aa6.17□□□□□ -1.42
PCGF3-207ENST00000440452 R4GN34 69 aa6.16□□□□□ -1.42
PCGF3-207ENST00000440452 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
PCGF3-207ENST00000440452 PLAC4Q8WY50 150 aa6.12□□□□□ -1.43
PCGF3-207ENST00000440452 TNXBP22105 4242 aa6.12□□□□□ -1.43
PCGF3-207ENST00000440452 MT1HL1P0DM35 61 aa6.12□□□□□ -1.43
PCGF3-207ENST00000440452 J3QL48 77 aa6.08□□□□□ -1.44
PCGF3-207ENST00000440452 KRTAP4-5Q9BYR2 181 aa6.07□□□□□ -1.44
PCGF3-207ENST00000440452 CAMK2N1Q7Z7J9 78 aa6.06□□□□□ -1.44
PCGF3-207ENST00000440452 EPPK1P58107 5090 aaKnown RBP6.05□□□□□ -1.44
PCGF3-207ENST00000440452 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
PCGF3-207ENST00000440452 MUC2Q02817 5179 aa5.91□□□□□ -1.46
PCGF3-207ENST00000440452 SEC61BP60468 96 aaKnown RBP5.91□□□□□ -1.46
PCGF3-207ENST00000440452 LORP23490 312 aaPredicted RBP5.85□□□□□ -1.47
PCGF3-207ENST00000440452 KRTAP4-1Q9BYQ7 146 aa5.79□□□□□ -1.48
PCGF3-207ENST00000440452 HERC2O95714 4834 aa5.78□□□□□ -1.48
PCGF3-207ENST00000440452 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
PCGF3-207ENST00000440452 M0R2T5 61 aa5.65□□□□□ -1.51
PCGF3-207ENST00000440452 TNP1P09430 55 aa5.62□□□□□ -1.51
PCGF3-207ENST00000440452 FAT4Q6V0I7 4981 aa5.61□□□□□ -1.51
PCGF3-207ENST00000440452 HERC1Q15751 4861 aa5.61□□□□□ -1.51
PCGF3-207ENST00000440452 MUC17Q685J3 4493 aa5.55□□□□□ -1.52
PCGF3-207ENST00000440452 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
PCGF3-207ENST00000440452 PCLOQ9Y6V0 5065 aa5.44□□□□□ -1.54
PCGF3-207ENST00000440452 KRTAP19-2Q3LHN2 52 aa5.4□□□□□ -1.55
PCGF3-207ENST00000440452 UBR4Q5T4S7 5183 aa5.36□□□□□ -1.55
PCGF3-207ENST00000440452 KRTAP10-10P60014 251 aa5.34□□□□□ -1.55
PCGF3-207ENST00000440452 BIRC6Q9NR09 4857 aa5.34□□□□□ -1.55
PCGF3-207ENST00000440452 FLGP20930 4061 aaPredicted RBP5.31□□□□□ -1.56
PCGF3-207ENST00000440452 HMCN2Q8NDA2 5059 aa5.28□□□□□ -1.56
PCGF3-207ENST00000440452 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
PCGF3-207ENST00000440452 LCE2CQ5TA81 110 aa5.18□□□□□ -1.58
PCGF3-207ENST00000440452 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
PCGF3-207ENST00000440452 MT1HP80294 61 aa5.15□□□□□ -1.59
PCGF3-207ENST00000440452 KRTAP19-1Q8IUB9 90 aa5.14□□□□□ -1.59
PCGF3-207ENST00000440452 MT1FP04733 61 aa5.12□□□□□ -1.59
PCGF3-207ENST00000440452 SPRR5A0A1B0GTR4 108 aa5.08□□□□□ -1.6
PCGF3-207ENST00000440452 MT2AP02795 61 aa5.08□□□□□ -1.6
PCGF3-207ENST00000440452 SPRR2GQ9BYE4 73 aa5.07□□□□□ -1.6
PCGF3-207ENST00000440452 INE1O15225 51 aa5.07□□□□□ -1.6
PCGF3-207ENST00000440452 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
PCGF3-207ENST00000440452 USH2AO75445 5202 aa5□□□□□ -1.61
PCGF3-207ENST00000440452 KRTAP9-8Q9BYQ0 159 aa4.96□□□□□ -1.61
PCGF3-207ENST00000440452 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
PCGF3-207ENST00000440452 KRTAP10-12P60413 245 aa4.9□□□□□ -1.63
PCGF3-207ENST00000440452 KMT2DO14686 5537 aa4.89□□□□□ -1.63
PCGF3-207ENST00000440452 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
PCGF3-207ENST00000440452 MT1BP07438 61 aa4.86□□□□□ -1.63
PCGF3-207ENST00000440452 KRTAP10-5P60370 271 aa4.85□□□□□ -1.63
PCGF3-207ENST00000440452 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
PCGF3-207ENST00000440452 MT1XP80297 61 aa4.85□□□□□ -1.63
PCGF3-207ENST00000440452 KRTAP19-8Q3LI54 63 aa4.78□□□□□ -1.64
PCGF3-207ENST00000440452 KRTAP8-1Q8IUC2 63 aa4.77□□□□□ -1.65
PCGF3-207ENST00000440452 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
PCGF3-207ENST00000440452 KRTAP4-8A0A0G2JLE6 195 aa4.66□□□□□ -1.66
PCGF3-207ENST00000440452 KRTAP4-8Q9BYQ9 185 aa4.66□□□□□ -1.66
PCGF3-207ENST00000440452 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.66
PCGF3-207ENST00000440452 LCE2BO14633 110 aa4.65□□□□□ -1.67
PCGF3-207ENST00000440452 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
PCGF3-207ENST00000440452 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
PCGF3-207ENST00000440452 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
PCGF3-207ENST00000440452 CRCT1Q9UGL9 99 aa4.41□□□□□ -1.7
PCGF3-207ENST00000440452 LCE2AQ5TA79 106 aaPredicted RBP4.37□□□□□ -1.71
PCGF3-207ENST00000440452 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.72
PCGF3-207ENST00000440452 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
PCGF3-207ENST00000440452 MUC12Q9UKN1 5478 aa4.31□□□□□ -1.72
PCGF3-207ENST00000440452 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
PCGF3-207ENST00000440452 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
PCGF3-207ENST00000440452 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
PCGF3-207ENST00000440452 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms