RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 A0A1W2PPM0 123 aa4.77□□□□□ -1.65
SPTLC1P4-201ENST00000435997 C9orf118A6NHY6 69 aa4.77□□□□□ -1.65
SPTLC1P4-201ENST00000435997 SMIM6P0DI80 62 aa4.76□□□□□ -1.65
SPTLC1P4-201ENST00000435997 TAX1BP3O14907 124 aa4.75□□□□□ -1.65
SPTLC1P4-201ENST00000435997 TSTD3H0UI37 97 aa4.74□□□□□ -1.65
SPTLC1P4-201ENST00000435997 BATFQ16520 125 aa4.74□□□□□ -1.65
SPTLC1P4-201ENST00000435997 CRIPTQ9P021 101 aa4.74□□□□□ -1.65
SPTLC1P4-201ENST00000435997 H3BS24 57 aa4.72□□□□□ -1.65
SPTLC1P4-201ENST00000435997 MDN1Q9NU22 5596 aa4.71□□□□□ -1.66
SPTLC1P4-201ENST00000435997 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
SPTLC1P4-201ENST00000435997 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
SPTLC1P4-201ENST00000435997 UBL5Q9BZL1 73 aa4.7□□□□□ -1.66
SPTLC1P4-201ENST00000435997 TP53AIP1Q9HCN2 124 aa4.7□□□□□ -1.66
SPTLC1P4-201ENST00000435997 A0A087WVE0 104 aa4.69□□□□□ -1.66
SPTLC1P4-201ENST00000435997 IMUPQ9GZP8 106 aa4.68□□□□□ -1.66
SPTLC1P4-201ENST00000435997 CYP4F30PQ9H0H9 118 aa4.67□□□□□ -1.66
SPTLC1P4-201ENST00000435997 PRO0461Q9UI25 63 aa4.67□□□□□ -1.66
SPTLC1P4-201ENST00000435997 SPCS1Q9Y6A9 102 aa4.67□□□□□ -1.66
SPTLC1P4-201ENST00000435997 H0YAA0 97 aa4.66□□□□□ -1.66
SPTLC1P4-201ENST00000435997 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.67
SPTLC1P4-201ENST00000435997 MT1XP80297 61 aa4.64□□□□□ -1.67
SPTLC1P4-201ENST00000435997 SPRR2EP22531 72 aa4.63□□□□□ -1.67
SPTLC1P4-201ENST00000435997 SPRR2BP35325 72 aa4.63□□□□□ -1.67
SPTLC1P4-201ENST00000435997 SPRR2AP35326 72 aa4.63□□□□□ -1.67
SPTLC1P4-201ENST00000435997 TRAV22A0A0B4J277 110 aa4.59□□□□□ -1.67
SPTLC1P4-201ENST00000435997 LOC101927531A0A1B0GV80 90 aa4.59□□□□□ -1.67
SPTLC1P4-201ENST00000435997 LCE1AQ5T7P2 110 aa4.59□□□□□ -1.67
SPTLC1P4-201ENST00000435997 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
SPTLC1P4-201ENST00000435997 KRTAP12-2P59991 146 aa4.57□□□□□ -1.68
SPTLC1P4-201ENST00000435997 A8MUN3 132 aa4.56□□□□□ -1.68
SPTLC1P4-201ENST00000435997 K7EP34 96 aa4.56□□□□□ -1.68
SPTLC1P4-201ENST00000435997 NDUFC1O43677 76 aa4.56□□□□□ -1.68
SPTLC1P4-201ENST00000435997 KRTAP8-1Q8IUC2 63 aa4.56□□□□□ -1.68
SPTLC1P4-201ENST00000435997 ADM2Q7Z4H4 148 aa4.54□□□□□ -1.68
SPTLC1P4-201ENST00000435997 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
SPTLC1P4-201ENST00000435997 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
SPTLC1P4-201ENST00000435997 LOC105371267A0A1B0GV96 52 aa4.5□□□□□ -1.69
SPTLC1P4-201ENST00000435997 COL5A1-AS1Q5SY13 56 aa4.5□□□□□ -1.69
SPTLC1P4-201ENST00000435997 ATOX1O00244 68 aa4.48□□□□□ -1.69
SPTLC1P4-201ENST00000435997 UQCRQO14949 82 aa4.48□□□□□ -1.69
SPTLC1P4-201ENST00000435997 SPRR2DP22532 72 aa4.48□□□□□ -1.69
SPTLC1P4-201ENST00000435997 PLAC4Q8WY50 150 aa4.48□□□□□ -1.69
SPTLC1P4-201ENST00000435997 H0Y9P7 68 aa4.47□□□□□ -1.69
SPTLC1P4-201ENST00000435997 ACYP1P07311 99 aa4.46□□□□□ -1.7
SPTLC1P4-201ENST00000435997 ETDBQ3ZM63 59 aa4.46□□□□□ -1.7
SPTLC1P4-201ENST00000435997 F8W1H4 67 aa4.45□□□□□ -1.7
SPTLC1P4-201ENST00000435997 P0C880 135 aa4.43□□□□□ -1.7
SPTLC1P4-201ENST00000435997 ATP5EP2Q5VTU8 51 aa4.43□□□□□ -1.7
SPTLC1P4-201ENST00000435997 GTF2H5Q6ZYL4 71 aa4.43□□□□□ -1.7
SPTLC1P4-201ENST00000435997 R4GN34 69 aa4.43□□□□□ -1.7
SPTLC1P4-201ENST00000435997 FAM240AA0A1B0GVK7 77 aa4.4□□□□□ -1.71
SPTLC1P4-201ENST00000435997 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.71
SPTLC1P4-201ENST00000435997 KRTAP10-12P60413 245 aa4.4□□□□□ -1.71
SPTLC1P4-201ENST00000435997 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
SPTLC1P4-201ENST00000435997 C20orf197Q8N268 126 aa4.39□□□□□ -1.71
SPTLC1P4-201ENST00000435997 M0QZ58 72 aa4.38□□□□□ -1.71
SPTLC1P4-201ENST00000435997 HIST1H4AP62805 103 aaKnown RBP4.37□□□□□ -1.71
SPTLC1P4-201ENST00000435997 LINC00208Q96KT6 92 aa4.36□□□□□ -1.71
SPTLC1P4-201ENST00000435997 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
SPTLC1P4-201ENST00000435997 DMAC1Q96GE9 116 aa4.33□□□□□ -1.72
SPTLC1P4-201ENST00000435997 LINC01554Q52M75 96 aa4.3□□□□□ -1.72
SPTLC1P4-201ENST00000435997 MP68P56378 58 aa4.29□□□□□ -1.72
SPTLC1P4-201ENST00000435997 LINC00643Q86TS7 51 aa4.27□□□□□ -1.73
SPTLC1P4-201ENST00000435997 H3BPC8 53 aa4.24□□□□□ -1.73
SPTLC1P4-201ENST00000435997 TRAV7A0A075B6U4 112 aa4.19□□□□□ -1.74
SPTLC1P4-201ENST00000435997 PCP4L1A6NKN8 68 aa4.16□□□□□ -1.74
SPTLC1P4-201ENST00000435997 MT-ATP8P03928 68 aa4.16□□□□□ -1.74
SPTLC1P4-201ENST00000435997 KRTAP19-7Q3SYF9 63 aa4.15□□□□□ -1.75
SPTLC1P4-201ENST00000435997 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
SPTLC1P4-201ENST00000435997 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
SPTLC1P4-201ENST00000435997 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
SPTLC1P4-201ENST00000435997 MT1EP04732 61 aa4.12□□□□□ -1.75
SPTLC1P4-201ENST00000435997 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
SPTLC1P4-201ENST00000435997 ACYP2P14621 99 aa4.11□□□□□ -1.75
SPTLC1P4-201ENST00000435997 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
SPTLC1P4-201ENST00000435997 SPTSSBQ8NFR3 76 aa4.08□□□□□ -1.76
SPTLC1P4-201ENST00000435997 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
SPTLC1P4-201ENST00000435997 SCGB1A1P11684 91 aa4.06□□□□□ -1.76
SPTLC1P4-201ENST00000435997 CAMK2N1Q7Z7J9 78 aa4.01□□□□□ -1.77
SPTLC1P4-201ENST00000435997 CYSTM1Q9H1C7 97 aa4.01□□□□□ -1.77
SPTLC1P4-201ENST00000435997 CHKB-CPT1BH3BT56 60 aa4□□□□□ -1.77
SPTLC1P4-201ENST00000435997 MT1GP13640 62 aa3.98□□□□□ -1.77
SPTLC1P4-201ENST00000435997 A0A1B0GV90 55 aa3.96□□□□□ -1.78
SPTLC1P4-201ENST00000435997 J3QR89 54 aa3.96□□□□□ -1.78
SPTLC1P4-201ENST00000435997 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
SPTLC1P4-201ENST00000435997 SMIM20Q8N5G0 67 aa3.93□□□□□ -1.78
SPTLC1P4-201ENST00000435997 A0A0D9SG42 100 aa3.92□□□□□ -1.78
SPTLC1P4-201ENST00000435997 MT4P47944 62 aa3.92□□□□□ -1.78
SPTLC1P4-201ENST00000435997 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
SPTLC1P4-201ENST00000435997 MT1MQ8N339 61 aa3.92□□□□□ -1.78
SPTLC1P4-201ENST00000435997 SPANXA2-OT1Q8N9U9 137 aa3.92□□□□□ -1.78
SPTLC1P4-201ENST00000435997 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
SPTLC1P4-201ENST00000435997 MT1LQ93083 61 aa3.9□□□□□ -1.79
SPTLC1P4-201ENST00000435997 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
SPTLC1P4-201ENST00000435997 SNURFQ9Y675 71 aa3.89□□□□□ -1.79
SPTLC1P4-201ENST00000435997 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
SPTLC1P4-201ENST00000435997 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
SPTLC1P4-201ENST00000435997 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
SPTLC1P4-201ENST00000435997 SPATA8Q6RVD6 105 aa3.82□□□□□ -1.8
SPTLC1P4-201ENST00000435997 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms