RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 MT1AP04731 61 aa0.55□□□□□ -2.32
HMGB3P10-201ENST00000434734 TEP1Q99973 2627 aaKnown RBP0.55□□□□□ -2.32
HMGB3P10-201ENST00000434734 COL6A3P12111 3177 aa0.54□□□□□ -2.32
HMGB3P10-201ENST00000434734 CELSR3Q9NYQ7 3312 aa0.54□□□□□ -2.32
HMGB3P10-201ENST00000434734 UBR4Q5T4S7 5183 aa0.53□□□□□ -2.32
HMGB3P10-201ENST00000434734 DNAH8Q96JB1 4490 aa0.53□□□□□ -2.32
HMGB3P10-201ENST00000434734 DNAH6Q9C0G6 4158 aa0.53□□□□□ -2.33
HMGB3P10-201ENST00000434734 USP9YO00507 2555 aaPredicted RBP0.52□□□□□ -2.33
HMGB3P10-201ENST00000434734 KRTAP8-1Q8IUC2 63 aa0.52□□□□□ -2.33
HMGB3P10-201ENST00000434734 FLNAP21333 2647 aaKnown RBP0.52□□□□□ -2.33
HMGB3P10-201ENST00000434734 PKHD1P08F94 4074 aa0.52□□□□□ -2.33
HMGB3P10-201ENST00000434734 HIVEP1P15822 2718 aa0.52□□□□□ -2.33
HMGB3P10-201ENST00000434734 CRYBG3Q68DQ2 2970 aa0.52□□□□□ -2.33
HMGB3P10-201ENST00000434734 PCLOQ9Y6V0 5065 aa0.52□□□□□ -2.33
HMGB3P10-201ENST00000434734 COX14Q96I36 57 aa0.51□□□□□ -2.33
HMGB3P10-201ENST00000434734 SPTBN5Q9NRC6 3674 aaKnown RBP0.51□□□□□ -2.33
HMGB3P10-201ENST00000434734 Q9Y3F1 56 aa0.51□□□□□ -2.33
HMGB3P10-201ENST00000434734 SYNE2Q8WXH0 6885 aaKnown RBP0.51□□□□□ -2.33
HMGB3P10-201ENST00000434734 H3BSH0 61 aa0.5□□□□□ -2.33
HMGB3P10-201ENST00000434734 DSTQ03001 7570 aaKnown RBP0.5□□□□□ -2.33
HMGB3P10-201ENST00000434734 ZFHX4Q86UP3 3567 aa0.5□□□□□ -2.33
HMGB3P10-201ENST00000434734 TLN2Q9Y4G6 2542 aa0.49□□□□□ -2.33
HMGB3P10-201ENST00000434734 FAT3Q8TDW7 4589 aa0.49□□□□□ -2.33
HMGB3P10-201ENST00000434734 DNAH7Q8WXX0 4024 aa0.49□□□□□ -2.33
HMGB3P10-201ENST00000434734 AKAP9Q99996 3911 aa0.49□□□□□ -2.33
HMGB3P10-201ENST00000434734 PRCDQ00LT1 54 aa0.49□□□□□ -2.33
HMGB3P10-201ENST00000434734 TMEM167AQ8TBQ9 72 aa0.48□□□□□ -2.33
HMGB3P10-201ENST00000434734 NEBP20929 6669 aa0.48□□□□□ -2.33
HMGB3P10-201ENST00000434734 FSIP2Q5CZC0 6907 aa0.48□□□□□ -2.33
HMGB3P10-201ENST00000434734 MAP1AP78559 2803 aaPredicted RBP0.48□□□□□ -2.33
HMGB3P10-201ENST00000434734 KMT2DO14686 5537 aa0.48□□□□□ -2.33
HMGB3P10-201ENST00000434734 SPRR2EP22531 72 aa0.47□□□□□ -2.33
HMGB3P10-201ENST00000434734 KIAA1109Q2LD37 5005 aa0.47□□□□□ -2.33
HMGB3P10-201ENST00000434734 LAMA5O15230 3695 aa0.46□□□□□ -2.34
HMGB3P10-201ENST00000434734 USP9XQ93008 2570 aaPredicted RBP0.46□□□□□ -2.34
HMGB3P10-201ENST00000434734 K7EIM0 57 aa0.46□□□□□ -2.34
HMGB3P10-201ENST00000434734 CD52P31358 61 aa0.46□□□□□ -2.34
HMGB3P10-201ENST00000434734 TGP01266 2768 aa0.46□□□□□ -2.34
HMGB3P10-201ENST00000434734 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
HMGB3P10-201ENST00000434734 NBPF19A0A087WUL8 3843 aa0.46□□□□□ -2.34
HMGB3P10-201ENST00000434734 ITPR3Q14573 2671 aa0.45□□□□□ -2.34
HMGB3P10-201ENST00000434734 PCNTO95613 3336 aa0.45□□□□□ -2.34
HMGB3P10-201ENST00000434734 USP34Q70CQ2 3546 aa0.45□□□□□ -2.34
HMGB3P10-201ENST00000434734 STATHP02808 62 aa0.45□□□□□ -2.34
HMGB3P10-201ENST00000434734 SMR3BP02814 79 aaPredicted RBP0.45□□□□□ -2.34
HMGB3P10-201ENST00000434734 RPL39P5Q59GN2 51 aa0.45□□□□□ -2.34
HMGB3P10-201ENST00000434734 SZT2Q5T011 3432 aa0.45□□□□□ -2.34
HMGB3P10-201ENST00000434734 FAT1Q14517 4588 aa0.45□□□□□ -2.34
HMGB3P10-201ENST00000434734 KRTAP19-5Q3LI72 72 aa0.44□□□□□ -2.34
HMGB3P10-201ENST00000434734 SPRR2FQ96RM1 72 aa0.44□□□□□ -2.34
HMGB3P10-201ENST00000434734 DMDP11532 3685 aa0.44□□□□□ -2.34
HMGB3P10-201ENST00000434734 UTRNP46939 3433 aa0.44□□□□□ -2.34
HMGB3P10-201ENST00000434734 DNAH1Q9P2D7 4330 aa0.43□□□□□ -2.34
HMGB3P10-201ENST00000434734 HTTP42858 3142 aa0.43□□□□□ -2.34
HMGB3P10-201ENST00000434734 MUC2Q02817 5179 aa0.43□□□□□ -2.34
HMGB3P10-201ENST00000434734 SRCAPQ6ZRS2 3230 aa0.43□□□□□ -2.34
HMGB3P10-201ENST00000434734 DNAH14Q0VDD8 3507 aa0.43□□□□□ -2.34
HMGB3P10-201ENST00000434734 DEFB108AA8MXU0 73 aa0.43□□□□□ -2.34
HMGB3P10-201ENST00000434734 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
HMGB3P10-201ENST00000434734 LAMA1P25391 3075 aa0.42□□□□□ -2.34
HMGB3P10-201ENST00000434734 LRP2P98164 4655 aa0.42□□□□□ -2.34
HMGB3P10-201ENST00000434734 WDFY3Q8IZQ1 3526 aa0.42□□□□□ -2.34
HMGB3P10-201ENST00000434734 GOLGB1Q14789 3259 aaKnown RBP0.42□□□□□ -2.34
HMGB3P10-201ENST00000434734 MYO15AQ9UKN7 3530 aa0.42□□□□□ -2.34
HMGB3P10-201ENST00000434734 XIRP2A4UGR9 3374 aa0.41□□□□□ -2.34
HMGB3P10-201ENST00000434734 TRIOO75962 3097 aa0.41□□□□□ -2.34
HMGB3P10-201ENST00000434734 KMT2CQ8NEZ4 4911 aaKnown RBP0.41□□□□□ -2.34
HMGB3P10-201ENST00000434734 VCANP13611 3396 aa0.4□□□□□ -2.35
HMGB3P10-201ENST00000434734 CDH23Q9H251 3354 aa0.4□□□□□ -2.35
HMGB3P10-201ENST00000434734 DEFB133Q30KQ1 61 aa0.4□□□□□ -2.35
HMGB3P10-201ENST00000434734 RHPN1-AS1Q9BWJ2 59 aa0.4□□□□□ -2.35
HMGB3P10-201ENST00000434734 CENPFP49454 3210 aa0.4□□□□□ -2.35
HMGB3P10-201ENST00000434734 ASPMQ8IZT6 3477 aa0.4□□□□□ -2.35
HMGB3P10-201ENST00000434734 BRCA2P51587 3418 aa0.39□□□□□ -2.35
HMGB3P10-201ENST00000434734 UNC80Q8N2C7 3258 aa0.39□□□□□ -2.35
HMGB3P10-201ENST00000434734 SMG1Q96Q15 3661 aaKnown RBP0.39□□□□□ -2.35
HMGB3P10-201ENST00000434734 H3BUX3 64 aa0.39□□□□□ -2.35
HMGB3P10-201ENST00000434734 APELAP0DMC3 54 aa0.39□□□□□ -2.35
HMGB3P10-201ENST00000434734 DEFB1P60022 68 aa0.39□□□□□ -2.35
HMGB3P10-201ENST00000434734 DEFB108BQ8NET1 73 aa0.39□□□□□ -2.35
HMGB3P10-201ENST00000434734 MGAM2Q2M2H8 2515 aa0.39□□□□□ -2.35
HMGB3P10-201ENST00000434734 LAMA3Q16787 3333 aa0.38□□□□□ -2.35
HMGB3P10-201ENST00000434734 MXRA5Q9NR99 2828 aa0.37□□□□□ -2.35
HMGB3P10-201ENST00000434734 CSMD1Q96PZ7 3565 aa0.37□□□□□ -2.35
HMGB3P10-201ENST00000434734 WDR87Q6ZQQ6 2873 aa0.37□□□□□ -2.35
HMGB3P10-201ENST00000434734 CEP350Q5VT06 3117 aa0.37□□□□□ -2.35
HMGB3P10-201ENST00000434734 DNAH10Q8IVF4 4471 aa0.37□□□□□ -2.35
HMGB3P10-201ENST00000434734 EP400Q96L91 3159 aa0.37□□□□□ -2.35
HMGB3P10-201ENST00000434734 TRRAPQ9Y4A5 3859 aa0.37□□□□□ -2.35
HMGB3P10-201ENST00000434734 VPS13CQ709C8 3753 aa0.36□□□□□ -2.35
HMGB3P10-201ENST00000434734 LINC01556Q5JQF7 62 aa0.36□□□□□ -2.35
HMGB3P10-201ENST00000434734 RELNP78509 3460 aa0.36□□□□□ -2.35
HMGB3P10-201ENST00000434734 DNAH17Q9UFH2 4485 aa0.36□□□□□ -2.35
HMGB3P10-201ENST00000434734 SPEGQ15772 3267 aa0.36□□□□□ -2.35
HMGB3P10-201ENST00000434734 NBEAL1Q6ZS30 2694 aa0.36□□□□□ -2.35
HMGB3P10-201ENST00000434734 MKI67P46013 3256 aaKnown RBP0.35□□□□□ -2.35
HMGB3P10-201ENST00000434734 STAB2Q8WWQ8 2551 aa0.35□□□□□ -2.35
HMGB3P10-201ENST00000434734 CMYA5Q8N3K9 4069 aa0.35□□□□□ -2.35
HMGB3P10-201ENST00000434734 A0A096LPF7 62 aa0.35□□□□□ -2.35
HMGB3P10-201ENST00000434734 DEFB124Q8NES8 71 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms