RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 DNAH3Q8TD57 4116 aa5.27□□□□□ -1.57
CCDC171-202ENST00000432954 CMYA5Q8N3K9 4069 aa5.25□□□□□ -1.57
CCDC171-202ENST00000432954 ATRQ13535 2644 aa5.25□□□□□ -1.57
CCDC171-202ENST00000432954 ANK2Q01484 3957 aa5.25□□□□□ -1.57
CCDC171-202ENST00000432954 DNAH8Q96JB1 4490 aa5.25□□□□□ -1.57
CCDC171-202ENST00000432954 TGP01266 2768 aa5.23□□□□□ -1.57
CCDC171-202ENST00000432954 DNAH11Q96DT5 4516 aa5.23□□□□□ -1.57
CCDC171-202ENST00000432954 TENM1Q9UKZ4 2725 aa5.22□□□□□ -1.57
CCDC171-202ENST00000432954 COL7A1Q02388 2944 aa5.22□□□□□ -1.57
CCDC171-202ENST00000432954 LYSTQ99698 3801 aa5.19□□□□□ -1.58
CCDC171-202ENST00000432954 DNAH10Q8IVF4 4471 aa5.17□□□□□ -1.58
CCDC171-202ENST00000432954 MAST4O15021 2626 aa5.16□□□□□ -1.58
CCDC171-202ENST00000432954 M0QZ58 72 aa5.15□□□□□ -1.58
CCDC171-202ENST00000432954 DNAH17Q9UFH2 4485 aa5.15□□□□□ -1.58
CCDC171-202ENST00000432954 STAB1Q9NY15 2570 aa5.14□□□□□ -1.59
CCDC171-202ENST00000432954 PKD1L1Q8TDX9 2849 aa5.12□□□□□ -1.59
CCDC171-202ENST00000432954 KRTAP1-5Q9BYS1 174 aa5.12□□□□□ -1.59
CCDC171-202ENST00000432954 HUWE1Q7Z6Z7 4374 aaKnown RBP5.11□□□□□ -1.59
CCDC171-202ENST00000432954 DNAH9Q9NYC9 4486 aa5.11□□□□□ -1.59
CCDC171-202ENST00000432954 MYCBP2O75592 4640 aa5.1□□□□□ -1.59
CCDC171-202ENST00000432954 KRTAP13-2Q52LG2 175 aa5.09□□□□□ -1.59
CCDC171-202ENST00000432954 DYNC2H1Q8NCM8 4307 aaKnown RBP5.06□□□□□ -1.6
CCDC171-202ENST00000432954 FBN3Q75N90 2809 aa5.01□□□□□ -1.61
CCDC171-202ENST00000432954 STAB2Q8WWQ8 2551 aa4.98□□□□□ -1.61
CCDC171-202ENST00000432954 MGAM2Q2M2H8 2515 aa4.97□□□□□ -1.61
CCDC171-202ENST00000432954 DNAH6Q9C0G6 4158 aa4.96□□□□□ -1.61
CCDC171-202ENST00000432954 TENM3Q9P273 2699 aa4.96□□□□□ -1.62
CCDC171-202ENST00000432954 Q5VSD8 79 aa4.96□□□□□ -1.62
CCDC171-202ENST00000432954 NOTCH1P46531 2555 aa4.96□□□□□ -1.62
CCDC171-202ENST00000432954 DNAH7Q8WXX0 4024 aa4.94□□□□□ -1.62
CCDC171-202ENST00000432954 DNHD1Q96M86 4753 aa4.94□□□□□ -1.62
CCDC171-202ENST00000432954 RPS29P62273 56 aaKnown RBP4.94□□□□□ -1.62
CCDC171-202ENST00000432954 KMT2AQ03164 3969 aa4.93□□□□□ -1.62
CCDC171-202ENST00000432954 PRKDCP78527 4128 aaKnown RBP4.89□□□□□ -1.63
CCDC171-202ENST00000432954 A0A1B0GVY2 172 aa4.89□□□□□ -1.63
CCDC171-202ENST00000432954 PLECQ15149 4684 aaKnown RBP4.86□□□□□ -1.63
CCDC171-202ENST00000432954 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
CCDC171-202ENST00000432954 KRTAP1-4P0C5Y4 121 aa4.83□□□□□ -1.64
CCDC171-202ENST00000432954 DNAH2Q9P225 4427 aa4.82□□□□□ -1.64
CCDC171-202ENST00000432954 C9orf92A6NGG3 77 aa4.81□□□□□ -1.64
CCDC171-202ENST00000432954 STARD9Q9P2P6 4700 aa4.8□□□□□ -1.64
CCDC171-202ENST00000432954 HECTD4Q9Y4D8 3996 aa4.8□□□□□ -1.64
CCDC171-202ENST00000432954 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
CCDC171-202ENST00000432954 APOBP04114 4563 aaKnown RBP4.73□□□□□ -1.65
CCDC171-202ENST00000432954 SACSQ9NZJ4 4579 aa4.68□□□□□ -1.66
CCDC171-202ENST00000432954 FAT2Q9NYQ8 4349 aa4.61□□□□□ -1.67
CCDC171-202ENST00000432954 KRTAP10-2P60368 255 aa4.6□□□□□ -1.67
CCDC171-202ENST00000432954 DNAH5Q8TE73 4624 aa4.59□□□□□ -1.67
CCDC171-202ENST00000432954 TNP1P09430 55 aa4.59□□□□□ -1.67
CCDC171-202ENST00000432954 KRTAP10-10P60014 251 aa4.59□□□□□ -1.67
CCDC171-202ENST00000432954 HYDINQ4G0P3 5121 aa4.59□□□□□ -1.68
CCDC171-202ENST00000432954 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
CCDC171-202ENST00000432954 PKD1P98161 4303 aa4.58□□□□□ -1.68
CCDC171-202ENST00000432954 KRTAP10-1P60331 282 aa4.57□□□□□ -1.68
CCDC171-202ENST00000432954 DYNC1H1Q14204 4646 aaKnown RBP4.56□□□□□ -1.68
CCDC171-202ENST00000432954 RYR2Q92736 4967 aa4.55□□□□□ -1.68
CCDC171-202ENST00000432954 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
CCDC171-202ENST00000432954 LRP1Q07954 4544 aaKnown RBP4.49□□□□□ -1.69
CCDC171-202ENST00000432954 LRP1BQ9NZR2 4599 aa4.47□□□□□ -1.69
CCDC171-202ENST00000432954 PKHD1P08F94 4074 aa4.45□□□□□ -1.7
CCDC171-202ENST00000432954 PKHD1L1Q86WI1 4243 aa4.44□□□□□ -1.7
CCDC171-202ENST00000432954 KRTAP10-4P60372 401 aaPredicted RBP4.43□□□□□ -1.7
CCDC171-202ENST00000432954 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
CCDC171-202ENST00000432954 KMT2CQ8NEZ4 4911 aaKnown RBP4.41□□□□□ -1.7
CCDC171-202ENST00000432954 VPS13BQ7Z7G8 4022 aa4.4□□□□□ -1.71
CCDC171-202ENST00000432954 FAT3Q8TDW7 4589 aa4.37□□□□□ -1.71
CCDC171-202ENST00000432954 FLGP20930 4061 aaPredicted RBP4.35□□□□□ -1.71
CCDC171-202ENST00000432954 TNXBP22105 4242 aa4.35□□□□□ -1.71
CCDC171-202ENST00000432954 RYR3Q15413 4870 aa4.34□□□□□ -1.71
CCDC171-202ENST00000432954 RYR1P21817 5038 aa4.32□□□□□ -1.72
CCDC171-202ENST00000432954 SMR3BP02814 79 aaPredicted RBP4.31□□□□□ -1.72
CCDC171-202ENST00000432954 HSPG2P98160 4391 aa4.3□□□□□ -1.72
CCDC171-202ENST00000432954 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
CCDC171-202ENST00000432954 FAT1Q14517 4588 aa4.28□□□□□ -1.73
CCDC171-202ENST00000432954 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
CCDC171-202ENST00000432954 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
CCDC171-202ENST00000432954 KIAA1109Q2LD37 5005 aa4.18□□□□□ -1.74
CCDC171-202ENST00000432954 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
CCDC171-202ENST00000432954 EPPK1P58107 5090 aaKnown RBP4.17□□□□□ -1.74
CCDC171-202ENST00000432954 BIRC6Q9NR09 4857 aa4.17□□□□□ -1.74
CCDC171-202ENST00000432954 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
CCDC171-202ENST00000432954 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
CCDC171-202ENST00000432954 HERC2O95714 4834 aa4.12□□□□□ -1.75
CCDC171-202ENST00000432954 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
CCDC171-202ENST00000432954 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
CCDC171-202ENST00000432954 KRTAP2-1Q9BYU5 128 aa4.06□□□□□ -1.76
CCDC171-202ENST00000432954 KRTAP10-5P60370 271 aa4□□□□□ -1.77
CCDC171-202ENST00000432954 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
CCDC171-202ENST00000432954 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
CCDC171-202ENST00000432954 LPAP08519 4548 aa3.96□□□□□ -1.78
CCDC171-202ENST00000432954 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
CCDC171-202ENST00000432954 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
CCDC171-202ENST00000432954 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
CCDC171-202ENST00000432954 MUC17Q685J3 4493 aa3.91□□□□□ -1.78
CCDC171-202ENST00000432954 M0R2T5 61 aa3.86□□□□□ -1.79
CCDC171-202ENST00000432954 PCLOQ9Y6V0 5065 aa3.84□□□□□ -1.79
CCDC171-202ENST00000432954 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
CCDC171-202ENST00000432954 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
CCDC171-202ENST00000432954 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
CCDC171-202ENST00000432954 HERC1Q15751 4861 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms