RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 KMT2AQ03164 3969 aa6.17□□□□□ -1.42
CPNE4-201ENST00000429747 PLAC4Q8WY50 150 aa6.17□□□□□ -1.42
CPNE4-201ENST00000429747 KRTAP3-2Q9BYR7 98 aa6.17□□□□□ -1.42
CPNE4-201ENST00000429747 PRKDCP78527 4128 aaKnown RBP6.16□□□□□ -1.42
CPNE4-201ENST00000429747 DNAH2Q9P225 4427 aa6.15□□□□□ -1.42
CPNE4-201ENST00000429747 DNAH3Q8TD57 4116 aa6.14□□□□□ -1.43
CPNE4-201ENST00000429747 DNHD1Q96M86 4753 aa6.14□□□□□ -1.43
CPNE4-201ENST00000429747 FRAS1Q86XX4 4008 aa6.11□□□□□ -1.43
CPNE4-201ENST00000429747 CMYA5Q8N3K9 4069 aa6.11□□□□□ -1.43
CPNE4-201ENST00000429747 FAT1Q14517 4588 aa6.1□□□□□ -1.43
CPNE4-201ENST00000429747 TNP1P09430 55 aa6.09□□□□□ -1.43
CPNE4-201ENST00000429747 DNAH7Q8WXX0 4024 aa6.07□□□□□ -1.44
CPNE4-201ENST00000429747 PP632Q6XCG6 107 aa6.03□□□□□ -1.44
CPNE4-201ENST00000429747 MT1HL1P0DM35 61 aa6.03□□□□□ -1.44
CPNE4-201ENST00000429747 DYNC1H1Q14204 4646 aaKnown RBP5.99□□□□□ -1.45
CPNE4-201ENST00000429747 DNAH6Q9C0G6 4158 aa5.97□□□□□ -1.45
CPNE4-201ENST00000429747 HECTD4Q9Y4D8 3996 aa5.97□□□□□ -1.45
CPNE4-201ENST00000429747 VPS13BQ7Z7G8 4022 aa5.97□□□□□ -1.45
CPNE4-201ENST00000429747 ALMS1Q8TCU4 4167 aa5.97□□□□□ -1.45
CPNE4-201ENST00000429747 DYNC2H1Q8NCM8 4307 aaKnown RBP5.95□□□□□ -1.46
CPNE4-201ENST00000429747 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
CPNE4-201ENST00000429747 MYCBP2O75592 4640 aa5.89□□□□□ -1.47
CPNE4-201ENST00000429747 SACSQ9NZJ4 4579 aa5.87□□□□□ -1.47
CPNE4-201ENST00000429747 KRTAP4-5Q9BYR2 181 aa5.79□□□□□ -1.48
CPNE4-201ENST00000429747 LORP23490 312 aaPredicted RBP5.77□□□□□ -1.49
CPNE4-201ENST00000429747 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
CPNE4-201ENST00000429747 FAT2Q9NYQ8 4349 aa5.76□□□□□ -1.49
CPNE4-201ENST00000429747 HYDINQ4G0P3 5121 aa5.74□□□□□ -1.49
CPNE4-201ENST00000429747 LRP1Q07954 4544 aaKnown RBP5.74□□□□□ -1.49
CPNE4-201ENST00000429747 APOBP04114 4563 aaKnown RBP5.72□□□□□ -1.49
CPNE4-201ENST00000429747 RYR1P21817 5038 aa5.69□□□□□ -1.5
CPNE4-201ENST00000429747 PKHD1P08F94 4074 aa5.69□□□□□ -1.5
CPNE4-201ENST00000429747 KIAA1109Q2LD37 5005 aa5.65□□□□□ -1.5
CPNE4-201ENST00000429747 FAT3Q8TDW7 4589 aa5.63□□□□□ -1.51
CPNE4-201ENST00000429747 KRTAP4-1Q9BYQ7 146 aa5.57□□□□□ -1.52
CPNE4-201ENST00000429747 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
CPNE4-201ENST00000429747 RYR3Q15413 4870 aa5.53□□□□□ -1.52
CPNE4-201ENST00000429747 PKD1P98161 4303 aa5.52□□□□□ -1.53
CPNE4-201ENST00000429747 KMT2CQ8NEZ4 4911 aaKnown RBP5.49□□□□□ -1.53
CPNE4-201ENST00000429747 LRP2P98164 4655 aa5.48□□□□□ -1.53
CPNE4-201ENST00000429747 LCE2DQ5TA82 110 aaPredicted RBP5.44□□□□□ -1.54
CPNE4-201ENST00000429747 RYR2Q92736 4967 aa5.43□□□□□ -1.54
CPNE4-201ENST00000429747 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
CPNE4-201ENST00000429747 HSPG2P98160 4391 aa5.37□□□□□ -1.55
CPNE4-201ENST00000429747 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
CPNE4-201ENST00000429747 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
CPNE4-201ENST00000429747 PKHD1L1Q86WI1 4243 aa5.27□□□□□ -1.57
CPNE4-201ENST00000429747 LPAP08519 4548 aa5.25□□□□□ -1.57
CPNE4-201ENST00000429747 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
CPNE4-201ENST00000429747 TNXBP22105 4242 aa5.21□□□□□ -1.58
CPNE4-201ENST00000429747 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
CPNE4-201ENST00000429747 HERC2O95714 4834 aa5.16□□□□□ -1.58
CPNE4-201ENST00000429747 EPPK1P58107 5090 aaKnown RBP5.14□□□□□ -1.59
CPNE4-201ENST00000429747 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
CPNE4-201ENST00000429747 MT1HP80294 61 aa5.1□□□□□ -1.59
CPNE4-201ENST00000429747 MT2AP02795 61 aa5.09□□□□□ -1.59
CPNE4-201ENST00000429747 INE1O15225 51 aa5.06□□□□□ -1.6
CPNE4-201ENST00000429747 MT1FP04733 61 aa5.06□□□□□ -1.6
CPNE4-201ENST00000429747 KRTAP19-1Q8IUB9 90 aa5.04□□□□□ -1.6
CPNE4-201ENST00000429747 KRTAP19-2Q3LHN2 52 aa4.97□□□□□ -1.61
CPNE4-201ENST00000429747 ABCA13Q86UQ4 5058 aa4.94□□□□□ -1.62
CPNE4-201ENST00000429747 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
CPNE4-201ENST00000429747 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
CPNE4-201ENST00000429747 LCE2CQ5TA81 110 aa4.88□□□□□ -1.63
CPNE4-201ENST00000429747 SPRR5A0A1B0GTR4 108 aa4.86□□□□□ -1.63
CPNE4-201ENST00000429747 MUC2Q02817 5179 aa4.85□□□□□ -1.63
CPNE4-201ENST00000429747 FLGP20930 4061 aaPredicted RBP4.83□□□□□ -1.64
CPNE4-201ENST00000429747 HERC1Q15751 4861 aa4.82□□□□□ -1.64
CPNE4-201ENST00000429747 KRTAP19-8Q3LI54 63 aa4.81□□□□□ -1.64
CPNE4-201ENST00000429747 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
CPNE4-201ENST00000429747 MT1XP80297 61 aa4.79□□□□□ -1.64
CPNE4-201ENST00000429747 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
CPNE4-201ENST00000429747 CRCT1Q9UGL9 99 aa4.79□□□□□ -1.64
CPNE4-201ENST00000429747 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
CPNE4-201ENST00000429747 MT1BP07438 61 aa4.77□□□□□ -1.65
CPNE4-201ENST00000429747 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
CPNE4-201ENST00000429747 BIRC6Q9NR09 4857 aa4.76□□□□□ -1.65
CPNE4-201ENST00000429747 PCLOQ9Y6V0 5065 aa4.75□□□□□ -1.65
CPNE4-201ENST00000429747 RNF213Q63HN8 5207 aa4.74□□□□□ -1.65
CPNE4-201ENST00000429747 FAT4Q6V0I7 4981 aa4.71□□□□□ -1.66
CPNE4-201ENST00000429747 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
CPNE4-201ENST00000429747 LCE2BO14633 110 aa4.69□□□□□ -1.66
CPNE4-201ENST00000429747 UBR4Q5T4S7 5183 aa4.63□□□□□ -1.67
CPNE4-201ENST00000429747 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
CPNE4-201ENST00000429747 HMCN2Q8NDA2 5059 aa4.59□□□□□ -1.67
CPNE4-201ENST00000429747 KRTAP4-8A0A0G2JLE6 195 aa4.57□□□□□ -1.68
CPNE4-201ENST00000429747 KRTAP4-8Q9BYQ9 185 aa4.57□□□□□ -1.68
CPNE4-201ENST00000429747 LCE2AQ5TA79 106 aaPredicted RBP4.53□□□□□ -1.68
CPNE4-201ENST00000429747 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
CPNE4-201ENST00000429747 FSIP2Q5CZC0 6907 aa4.37□□□□□ -1.71
CPNE4-201ENST00000429747 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
CPNE4-201ENST00000429747 MT1GP13640 62 aa4.27□□□□□ -1.73
CPNE4-201ENST00000429747 SPRR2FQ96RM1 72 aa4.27□□□□□ -1.73
CPNE4-201ENST00000429747 MT1LQ93083 61 aa4.24□□□□□ -1.73
CPNE4-201ENST00000429747 MT1EP04732 61 aa4.21□□□□□ -1.74
CPNE4-201ENST00000429747 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
CPNE4-201ENST00000429747 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
CPNE4-201ENST00000429747 USH2AO75445 5202 aa4.16□□□□□ -1.74
CPNE4-201ENST00000429747 LCE3BQ5TA77 95 aa4.15□□□□□ -1.75
CPNE4-201ENST00000429747 KMT2DO14686 5537 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms