RNA–Protein interactions for RNA: ENST00000428797.7

GABRA1-203, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-203ENST00000428797 DNAH11Q96DT5 4516 aa4.53□□□□□ -1.68
GABRA1-203ENST00000428797 MT1HL1P0DM35 61 aa4.52□□□□□ -1.69
GABRA1-203ENST00000428797 DNAH2Q9P225 4427 aa4.49□□□□□ -1.69
GABRA1-203ENST00000428797 DYNC2H1Q8NCM8 4307 aaKnown RBP4.49□□□□□ -1.69
GABRA1-203ENST00000428797 STARD9Q9P2P6 4700 aa4.49□□□□□ -1.69
GABRA1-203ENST00000428797 DNAH5Q8TE73 4624 aa4.47□□□□□ -1.69
GABRA1-203ENST00000428797 CMYA5Q8N3K9 4069 aa4.45□□□□□ -1.7
GABRA1-203ENST00000428797 ANK2Q01484 3957 aa4.44□□□□□ -1.7
GABRA1-203ENST00000428797 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
GABRA1-203ENST00000428797 LRP1BQ9NZR2 4599 aa4.41□□□□□ -1.7
GABRA1-203ENST00000428797 SACSQ9NZJ4 4579 aa4.35□□□□□ -1.71
GABRA1-203ENST00000428797 DNAH6Q9C0G6 4158 aa4.34□□□□□ -1.71
GABRA1-203ENST00000428797 DYNC1H1Q14204 4646 aaKnown RBP4.34□□□□□ -1.71
GABRA1-203ENST00000428797 PRKDCP78527 4128 aaKnown RBP4.34□□□□□ -1.72
GABRA1-203ENST00000428797 KMT2AQ03164 3969 aa4.32□□□□□ -1.72
GABRA1-203ENST00000428797 HECTD4Q9Y4D8 3996 aa4.32□□□□□ -1.72
GABRA1-203ENST00000428797 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
GABRA1-203ENST00000428797 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
GABRA1-203ENST00000428797 VPS13BQ7Z7G8 4022 aa4.27□□□□□ -1.73
GABRA1-203ENST00000428797 FAT1Q14517 4588 aa4.26□□□□□ -1.73
GABRA1-203ENST00000428797 FAT2Q9NYQ8 4349 aa4.26□□□□□ -1.73
GABRA1-203ENST00000428797 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
GABRA1-203ENST00000428797 FRAS1Q86XX4 4008 aa4.25□□□□□ -1.73
GABRA1-203ENST00000428797 LYSTQ99698 3801 aa4.24□□□□□ -1.73
GABRA1-203ENST00000428797 DNHD1Q96M86 4753 aa4.24□□□□□ -1.73
GABRA1-203ENST00000428797 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.73
GABRA1-203ENST00000428797 LORP23490 312 aaPredicted RBP4.18□□□□□ -1.74
GABRA1-203ENST00000428797 KRTAP4-5Q9BYR2 181 aa4.18□□□□□ -1.74
GABRA1-203ENST00000428797 APOBP04114 4563 aaKnown RBP4.1□□□□□ -1.75
GABRA1-203ENST00000428797 KRTAP4-1Q9BYQ7 146 aa4.07□□□□□ -1.76
GABRA1-203ENST00000428797 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
GABRA1-203ENST00000428797 PKD1P98161 4303 aa4.03□□□□□ -1.76
GABRA1-203ENST00000428797 HYDINQ4G0P3 5121 aa4.02□□□□□ -1.77
GABRA1-203ENST00000428797 RYR1P21817 5038 aa3.99□□□□□ -1.77
GABRA1-203ENST00000428797 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
GABRA1-203ENST00000428797 LRP1Q07954 4544 aaKnown RBP3.98□□□□□ -1.77
GABRA1-203ENST00000428797 INE1O15225 51 aa3.98□□□□□ -1.77
GABRA1-203ENST00000428797 RYR2Q92736 4967 aa3.97□□□□□ -1.77
GABRA1-203ENST00000428797 PKHD1L1Q86WI1 4243 aa3.97□□□□□ -1.77
GABRA1-203ENST00000428797 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
GABRA1-203ENST00000428797 KRTAP17-1Q9BYP8 105 aa3.96□□□□□ -1.78
GABRA1-203ENST00000428797 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
GABRA1-203ENST00000428797 SPRR2GQ9BYE4 73 aa3.95□□□□□ -1.78
GABRA1-203ENST00000428797 PKHD1P08F94 4074 aa3.94□□□□□ -1.78
GABRA1-203ENST00000428797 KIAA1109Q2LD37 5005 aa3.93□□□□□ -1.78
GABRA1-203ENST00000428797 KRTAP12-3P60328 96 aa3.92□□□□□ -1.78
GABRA1-203ENST00000428797 RYR3Q15413 4870 aa3.9□□□□□ -1.79
GABRA1-203ENST00000428797 HSPG2P98160 4391 aa3.85□□□□□ -1.79
GABRA1-203ENST00000428797 MT1HP80294 61 aa3.82□□□□□ -1.8
GABRA1-203ENST00000428797 TNXBP22105 4242 aa3.82□□□□□ -1.8
GABRA1-203ENST00000428797 LRP2P98164 4655 aa3.82□□□□□ -1.8
GABRA1-203ENST00000428797 MT2AP02795 61 aa3.81□□□□□ -1.8
GABRA1-203ENST00000428797 KRTAP8-1Q8IUC2 63 aa3.78□□□□□ -1.8
GABRA1-203ENST00000428797 KRTAP19-1Q8IUB9 90 aa3.76□□□□□ -1.81
GABRA1-203ENST00000428797 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
GABRA1-203ENST00000428797 MT1FP04733 61 aa3.75□□□□□ -1.81
GABRA1-203ENST00000428797 KRTAP19-2Q3LHN2 52 aa3.73□□□□□ -1.81
GABRA1-203ENST00000428797 KMT2CQ8NEZ4 4911 aaKnown RBP3.73□□□□□ -1.81
GABRA1-203ENST00000428797 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
GABRA1-203ENST00000428797 LCE2CQ5TA81 110 aa3.65□□□□□ -1.83
GABRA1-203ENST00000428797 HERC2O95714 4834 aa3.64□□□□□ -1.83
GABRA1-203ENST00000428797 LPAP08519 4548 aa3.62□□□□□ -1.83
GABRA1-203ENST00000428797 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
GABRA1-203ENST00000428797 MUC17Q685J3 4493 aa3.6□□□□□ -1.83
GABRA1-203ENST00000428797 KRTAP9-8Q9BYQ0 159 aa3.59□□□□□ -1.84
GABRA1-203ENST00000428797 MT1XP80297 61 aa3.58□□□□□ -1.84
GABRA1-203ENST00000428797 MT1BP07438 61 aa3.57□□□□□ -1.84
GABRA1-203ENST00000428797 FLGP20930 4061 aaPredicted RBP3.57□□□□□ -1.84
GABRA1-203ENST00000428797 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
GABRA1-203ENST00000428797 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
GABRA1-203ENST00000428797 HERC1Q15751 4861 aa3.56□□□□□ -1.84
GABRA1-203ENST00000428797 KRTAP19-5Q3LI72 72 aa3.55□□□□□ -1.84
GABRA1-203ENST00000428797 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.85
GABRA1-203ENST00000428797 BIRC6Q9NR09 4857 aa3.52□□□□□ -1.85
GABRA1-203ENST00000428797 KRTAP9-3Q9BYQ3 159 aa3.47□□□□□ -1.85
GABRA1-203ENST00000428797 EPPK1P58107 5090 aaKnown RBP3.45□□□□□ -1.86
GABRA1-203ENST00000428797 ABCA13Q86UQ4 5058 aa3.44□□□□□ -1.86
GABRA1-203ENST00000428797 CRCT1Q9UGL9 99 aa3.38□□□□□ -1.87
GABRA1-203ENST00000428797 PCLOQ9Y6V0 5065 aa3.34□□□□□ -1.88
GABRA1-203ENST00000428797 KRTAP4-8A0A0G2JLE6 195 aa3.27□□□□□ -1.89
GABRA1-203ENST00000428797 LCE2BO14633 110 aa3.27□□□□□ -1.89
GABRA1-203ENST00000428797 KRTAP4-8Q9BYQ9 185 aa3.27□□□□□ -1.89
GABRA1-203ENST00000428797 HMCN2Q8NDA2 5059 aa3.26□□□□□ -1.89
GABRA1-203ENST00000428797 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
GABRA1-203ENST00000428797 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
GABRA1-203ENST00000428797 MT1LQ93083 61 aa3.19□□□□□ -1.9
GABRA1-203ENST00000428797 MT1GP13640 62 aa3.17□□□□□ -1.9
GABRA1-203ENST00000428797 MT1EP04732 61 aa3.17□□□□□ -1.9
GABRA1-203ENST00000428797 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.9
GABRA1-203ENST00000428797 LCE2DQ5TA82 110 aaPredicted RBP3.15□□□□□ -1.91
GABRA1-203ENST00000428797 MUC2Q02817 5179 aa3.14□□□□□ -1.91
GABRA1-203ENST00000428797 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
GABRA1-203ENST00000428797 KRTAP4-7Q9BYR0 210 aa3.11□□□□□ -1.91
GABRA1-203ENST00000428797 LCE2AQ5TA79 106 aaPredicted RBP3.1□□□□□ -1.91
GABRA1-203ENST00000428797 KRTAP12-4P60329 112 aa3.09□□□□□ -1.91
GABRA1-203ENST00000428797 KRTAP2-3P0C7H8 128 aa3.08□□□□□ -1.92
GABRA1-203ENST00000428797 KRTAP2-4Q9BYR9 128 aa3.08□□□□□ -1.92
GABRA1-203ENST00000428797 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
GABRA1-203ENST00000428797 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
GABRA1-203ENST00000428797 UBR4Q5T4S7 5183 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms