RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 KRTAP2-4Q9BYR9 128 aa7.14□□□□□ -1.27
VARS-216ENST00000428445 K7EP34 96 aa7.13□□□□□ -1.27
VARS-216ENST00000428445 LOC101927531A0A1B0GV80 90 aa7.1□□□□□ -1.27
VARS-216ENST00000428445 LOC105371267A0A1B0GV96 52 aa7.1□□□□□ -1.27
VARS-216ENST00000428445 H0YAA0 97 aa7.09□□□□□ -1.27
VARS-216ENST00000428445 TRAV22A0A0B4J277 110 aa7.08□□□□□ -1.28
VARS-216ENST00000428445 F8W1H4 67 aa7.08□□□□□ -1.28
VARS-216ENST00000428445 SPRR2FQ96RM1 72 aa7.08□□□□□ -1.28
VARS-216ENST00000428445 SPRR2EP22531 72 aa7.06□□□□□ -1.28
VARS-216ENST00000428445 SPRR2BP35325 72 aa7.06□□□□□ -1.28
VARS-216ENST00000428445 SPRR2AP35326 72 aa7.06□□□□□ -1.28
VARS-216ENST00000428445 NDUFC1O43677 76 aa7.05□□□□□ -1.28
VARS-216ENST00000428445 GTF2H5Q6ZYL4 71 aa7.05□□□□□ -1.28
VARS-216ENST00000428445 ETDBQ3ZM63 59 aa7□□□□□ -1.29
VARS-216ENST00000428445 ATOX1O00244 68 aa6.99□□□□□ -1.29
VARS-216ENST00000428445 A8MUN3 132 aa6.98□□□□□ -1.29
VARS-216ENST00000428445 UQCRQO14949 82 aa6.98□□□□□ -1.29
VARS-216ENST00000428445 PRO2289Q9P1D8 64 aa6.98□□□□□ -1.29
VARS-216ENST00000428445 ACYP1P07311 99 aa6.97□□□□□ -1.29
VARS-216ENST00000428445 MT1XP80297 61 aa6.97□□□□□ -1.29
VARS-216ENST00000428445 ATP5EP2Q5VTU8 51 aa6.93□□□□□ -1.3
VARS-216ENST00000428445 KRTAP8-1Q8IUC2 63 aa6.92□□□□□ -1.3
VARS-216ENST00000428445 H0Y9P7 68 aa6.91□□□□□ -1.3
VARS-216ENST00000428445 LCE1AQ5T7P2 110 aa6.91□□□□□ -1.3
VARS-216ENST00000428445 ADM2Q7Z4H4 148 aa6.91□□□□□ -1.3
VARS-216ENST00000428445 PLAC4Q8WY50 150 aa6.89□□□□□ -1.31
VARS-216ENST00000428445 KRTAP2-2Q9BYT5 123 aa6.89□□□□□ -1.31
VARS-216ENST00000428445 KRTAP2-1Q9BYU5 128 aa6.89□□□□□ -1.31
VARS-216ENST00000428445 FAM240AA0A1B0GVK7 77 aa6.87□□□□□ -1.31
VARS-216ENST00000428445 HIST1H4AP62805 103 aaKnown RBP6.86□□□□□ -1.31
VARS-216ENST00000428445 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
VARS-216ENST00000428445 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
VARS-216ENST00000428445 SPRR2DP22532 72 aa6.82□□□□□ -1.32
VARS-216ENST00000428445 KRTAP12-2P59991 146 aa6.81□□□□□ -1.32
VARS-216ENST00000428445 C20orf197Q8N268 126 aa6.8□□□□□ -1.32
VARS-216ENST00000428445 R4GN34 69 aa6.8□□□□□ -1.32
VARS-216ENST00000428445 LINC00208Q96KT6 92 aa6.79□□□□□ -1.32
VARS-216ENST00000428445 MP68P56378 58 aa6.76□□□□□ -1.33
VARS-216ENST00000428445 LINC00643Q86TS7 51 aa6.74□□□□□ -1.33
VARS-216ENST00000428445 P0C880 135 aa6.73□□□□□ -1.33
VARS-216ENST00000428445 OCR1Q9BZK8 76 aa6.7□□□□□ -1.34
VARS-216ENST00000428445 H3BPC8 53 aa6.68□□□□□ -1.34
VARS-216ENST00000428445 M0QZ58 72 aa6.68□□□□□ -1.34
VARS-216ENST00000428445 KRTAP10-7P60409 375 aaPredicted RBP6.68□□□□□ -1.34
VARS-216ENST00000428445 PCP4L1A6NKN8 68 aa6.66□□□□□ -1.34
VARS-216ENST00000428445 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
VARS-216ENST00000428445 LINC01554Q52M75 96 aa6.64□□□□□ -1.35
VARS-216ENST00000428445 DMAC1Q96GE9 116 aa6.63□□□□□ -1.35
VARS-216ENST00000428445 KRTAP3-2Q9BYR7 98 aa6.61□□□□□ -1.35
VARS-216ENST00000428445 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
VARS-216ENST00000428445 TRAV7A0A075B6U4 112 aa6.54□□□□□ -1.36
VARS-216ENST00000428445 SCGB1A1P11684 91 aa6.49□□□□□ -1.37
VARS-216ENST00000428445 ACYP2P14621 99 aa6.49□□□□□ -1.37
VARS-216ENST00000428445 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
VARS-216ENST00000428445 MT-ATP8P03928 68 aa6.45□□□□□ -1.38
VARS-216ENST00000428445 DSTQ03001 7570 aaKnown RBP6.44□□□□□ -1.38
VARS-216ENST00000428445 J3QR89 54 aa6.42□□□□□ -1.38
VARS-216ENST00000428445 GPR98Q8WXG9 6306 aa6.42□□□□□ -1.38
VARS-216ENST00000428445 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
VARS-216ENST00000428445 SMIM20Q8N5G0 67 aa6.32□□□□□ -1.4
VARS-216ENST00000428445 CHKB-CPT1BH3BT56 60 aa6.3□□□□□ -1.4
VARS-216ENST00000428445 A0A1B0GV90 55 aa6.28□□□□□ -1.4
VARS-216ENST00000428445 LCE5AQ5TCM9 118 aa6.25□□□□□ -1.41
VARS-216ENST00000428445 KRTAP19-7Q3SYF9 63 aa6.23□□□□□ -1.41
VARS-216ENST00000428445 CAMK2N1Q7Z7J9 78 aa6.2□□□□□ -1.42
VARS-216ENST00000428445 MT1EP04732 61 aa6.18□□□□□ -1.42
VARS-216ENST00000428445 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
VARS-216ENST00000428445 KRTAP13-4Q3LI77 160 aa6.17□□□□□ -1.42
VARS-216ENST00000428445 SPANXA2-OT1Q8N9U9 137 aa6.16□□□□□ -1.42
VARS-216ENST00000428445 LCE1DQ5T752 114 aa6.12□□□□□ -1.43
VARS-216ENST00000428445 SNURFQ9Y675 71 aa6.08□□□□□ -1.44
VARS-216ENST00000428445 CYSTM1Q9H1C7 97 aa6.06□□□□□ -1.44
VARS-216ENST00000428445 MT4P47944 62 aa6.04□□□□□ -1.44
VARS-216ENST00000428445 K7ERU9 68 aa6.03□□□□□ -1.44
VARS-216ENST00000428445 SEC61GP60059 68 aa6.01□□□□□ -1.45
VARS-216ENST00000428445 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
VARS-216ENST00000428445 MT1GP13640 62 aa5.99□□□□□ -1.45
VARS-216ENST00000428445 SERP1Q9Y6X1 66 aa5.99□□□□□ -1.45
VARS-216ENST00000428445 HMCN1Q96RW7 5635 aa5.98□□□□□ -1.45
VARS-216ENST00000428445 A0A0D9SG42 100 aa5.98□□□□□ -1.45
VARS-216ENST00000428445 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
VARS-216ENST00000428445 SERP2Q8N6R1 65 aa5.95□□□□□ -1.46
VARS-216ENST00000428445 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
VARS-216ENST00000428445 AHNAK2Q8IVF2 5795 aa5.92□□□□□ -1.46
VARS-216ENST00000428445 COA5Q86WW8 74 aa5.92□□□□□ -1.46
VARS-216ENST00000428445 MT1MQ8N339 61 aa5.92□□□□□ -1.46
VARS-216ENST00000428445 SPINT4Q6UDR6 99 aa5.9□□□□□ -1.46
VARS-216ENST00000428445 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
VARS-216ENST00000428445 A0A1B0GU33 70 aa5.89□□□□□ -1.47
VARS-216ENST00000428445 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
VARS-216ENST00000428445 MT1LQ93083 61 aa5.85□□□□□ -1.47
VARS-216ENST00000428445 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
VARS-216ENST00000428445 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
VARS-216ENST00000428445 KRTAP5-10Q6L8G5 202 aa5.83□□□□□ -1.48
VARS-216ENST00000428445 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
VARS-216ENST00000428445 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
VARS-216ENST00000428445 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
VARS-216ENST00000428445 LCE3AQ5TA76 89 aa5.7□□□□□ -1.5
VARS-216ENST00000428445 TNP1P09430 55 aa5.69□□□□□ -1.5
VARS-216ENST00000428445 COX7CP15954 63 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms