RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PKHD1L1Q86WI1 4243 aa2.64□□□□□ -1.99
RIF1-203ENST00000428287 LRP2P98164 4655 aa2.63□□□□□ -1.99
RIF1-203ENST00000428287 SACSQ9NZJ4 4579 aa2.62□□□□□ -1.99
RIF1-203ENST00000428287 KRTAP10-2P60368 255 aa2.62□□□□□ -1.99
RIF1-203ENST00000428287 CRIPTQ9P021 101 aa2.61□□□□□ -1.99
RIF1-203ENST00000428287 KRTAP12-1P59990 96 aa2.6□□□□□ -1.99
RIF1-203ENST00000428287 RYR3Q15413 4870 aa2.6□□□□□ -1.99
RIF1-203ENST00000428287 KRTAP10-1P60331 282 aa2.6□□□□□ -1.99
RIF1-203ENST00000428287 S4R3F8 94 aa2.6□□□□□ -1.99
RIF1-203ENST00000428287 APOBP04114 4563 aaKnown RBP2.6□□□□□ -1.99
RIF1-203ENST00000428287 SPINT4Q6UDR6 99 aa2.57□□□□□ -2
RIF1-203ENST00000428287 TNXBP22105 4242 aa2.57□□□□□ -2
RIF1-203ENST00000428287 KMT2CQ8NEZ4 4911 aaKnown RBP2.57□□□□□ -2
RIF1-203ENST00000428287 KRTAP10-4P60372 401 aaPredicted RBP2.57□□□□□ -2
RIF1-203ENST00000428287 C10orf95Q9H7T3 257 aa2.56□□□□□ -2
RIF1-203ENST00000428287 M0QZ58 72 aa2.56□□□□□ -2
RIF1-203ENST00000428287 HYDINQ4G0P3 5121 aa2.55□□□□□ -2
RIF1-203ENST00000428287 RYR1P21817 5038 aa2.55□□□□□ -2
RIF1-203ENST00000428287 KRTAP12-2P59991 146 aa2.55□□□□□ -2
RIF1-203ENST00000428287 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
RIF1-203ENST00000428287 EPPK1P58107 5090 aaKnown RBP2.53□□□□□ -2
RIF1-203ENST00000428287 A0A0D9SG42 100 aa2.49□□□□□ -2.01
RIF1-203ENST00000428287 KRTAP10-8P60410 259 aa2.49□□□□□ -2.01
RIF1-203ENST00000428287 A0A0A0MQY5 61 aa2.48□□□□□ -2.01
RIF1-203ENST00000428287 C9orf92A6NGG3 77 aa2.48□□□□□ -2.01
RIF1-203ENST00000428287 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
RIF1-203ENST00000428287 PP632Q6XCG6 107 aa2.45□□□□□ -2.02
RIF1-203ENST00000428287 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
RIF1-203ENST00000428287 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
RIF1-203ENST00000428287 LPAP08519 4548 aa2.43□□□□□ -2.02
RIF1-203ENST00000428287 PCLOQ9Y6V0 5065 aa2.43□□□□□ -2.02
RIF1-203ENST00000428287 KRTAP23-1A1A580 65 aa2.41□□□□□ -2.02
RIF1-203ENST00000428287 ABCA13Q86UQ4 5058 aa2.4□□□□□ -2.03
RIF1-203ENST00000428287 MUC2Q02817 5179 aa2.39□□□□□ -2.03
RIF1-203ENST00000428287 KRTAP17-1Q9BYP8 105 aa2.39□□□□□ -2.03
RIF1-203ENST00000428287 RNF213Q63HN8 5207 aa2.37□□□□□ -2.03
RIF1-203ENST00000428287 A0A1B0GVY2 172 aa2.36□□□□□ -2.03
RIF1-203ENST00000428287 R4GN34 69 aa2.36□□□□□ -2.03
RIF1-203ENST00000428287 SMR3BP02814 79 aaPredicted RBP2.35□□□□□ -2.03
RIF1-203ENST00000428287 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
RIF1-203ENST00000428287 MT1HL1P0DM35 61 aa2.32□□□□□ -2.04
RIF1-203ENST00000428287 SEC61BP60468 96 aaKnown RBP2.31□□□□□ -2.04
RIF1-203ENST00000428287 KRTAP19-2Q3LHN2 52 aa2.3□□□□□ -2.04
RIF1-203ENST00000428287 HERC1Q15751 4861 aa2.3□□□□□ -2.04
RIF1-203ENST00000428287 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.05
RIF1-203ENST00000428287 LORP23490 312 aaPredicted RBP2.26□□□□□ -2.05
RIF1-203ENST00000428287 KIAA1109Q2LD37 5005 aa2.26□□□□□ -2.05
RIF1-203ENST00000428287 MUC17Q685J3 4493 aa2.26□□□□□ -2.05
RIF1-203ENST00000428287 TNP1P09430 55 aa2.25□□□□□ -2.05
RIF1-203ENST00000428287 HMCN2Q8NDA2 5059 aa2.25□□□□□ -2.05
RIF1-203ENST00000428287 CAMK2N1Q7Z7J9 78 aa2.23□□□□□ -2.05
RIF1-203ENST00000428287 UBR4Q5T4S7 5183 aa2.23□□□□□ -2.05
RIF1-203ENST00000428287 KRTAP21-3Q3LHN1 58 aa2.22□□□□□ -2.05
RIF1-203ENST00000428287 INE1O15225 51 aa2.21□□□□□ -2.06
RIF1-203ENST00000428287 RYR2Q92736 4967 aa2.21□□□□□ -2.06
RIF1-203ENST00000428287 Q5VSD8 79 aa2.2□□□□□ -2.06
RIF1-203ENST00000428287 KRTAP8-1Q8IUC2 63 aa2.19□□□□□ -2.06
RIF1-203ENST00000428287 SPRR2GQ9BYE4 73 aa2.16□□□□□ -2.06
RIF1-203ENST00000428287 USH2AO75445 5202 aa2.15□□□□□ -2.07
RIF1-203ENST00000428287 KRTAP4-1Q9BYQ7 146 aa2.14□□□□□ -2.07
RIF1-203ENST00000428287 KRTAP19-1Q8IUB9 90 aa2.14□□□□□ -2.07
RIF1-203ENST00000428287 SYNE1Q8NF91 8797 aaKnown RBP2.11□□□□□ -2.07
RIF1-203ENST00000428287 KRTAP10-12P60413 245 aa2.07□□□□□ -2.08
RIF1-203ENST00000428287 KRTAP19-8Q3LI54 63 aa2.03□□□□□ -2.08
RIF1-203ENST00000428287 LCE2CQ5TA81 110 aa2.02□□□□□ -2.09
RIF1-203ENST00000428287 LCE3AQ5TA76 89 aa2.01□□□□□ -2.09
RIF1-203ENST00000428287 HERC2O95714 4834 aa1.99□□□□□ -2.09
RIF1-203ENST00000428287 BIRC6Q9NR09 4857 aa1.98□□□□□ -2.09
RIF1-203ENST00000428287 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
RIF1-203ENST00000428287 KRTAP10-5P60370 271 aa1.95□□□□□ -2.1
RIF1-203ENST00000428287 KRTAP4-5Q9BYR2 181 aa1.95□□□□□ -2.1
RIF1-203ENST00000428287 MT1XP80297 61 aa1.95□□□□□ -2.1
RIF1-203ENST00000428287 KRTAP10-10P60014 251 aa1.95□□□□□ -2.1
RIF1-203ENST00000428287 KRTAP9-8Q9BYQ0 159 aa1.94□□□□□ -2.1
RIF1-203ENST00000428287 KRTAP19-4Q3LI73 84 aa1.94□□□□□ -2.1
RIF1-203ENST00000428287 KRTAP2-3P0C7H8 128 aa1.93□□□□□ -2.1
RIF1-203ENST00000428287 KRTAP2-4Q9BYR9 128 aa1.93□□□□□ -2.1
RIF1-203ENST00000428287 KRTAP2-1Q9BYU5 128 aa1.93□□□□□ -2.1
RIF1-203ENST00000428287 MT1BP07438 61 aa1.92□□□□□ -2.1
RIF1-203ENST00000428287 DSTQ03001 7570 aaKnown RBP1.91□□□□□ -2.1
RIF1-203ENST00000428287 KRTAP9-6A8MVA2 160 aa1.9□□□□□ -2.11
RIF1-203ENST00000428287 MT2AP02795 61 aa1.89□□□□□ -2.11
RIF1-203ENST00000428287 OBSCNQ5VST9 7968 aa1.89□□□□□ -2.11
RIF1-203ENST00000428287 SSPOA2VEC9 5147 aa1.89□□□□□ -2.11
RIF1-203ENST00000428287 MT1FP04733 61 aa1.89□□□□□ -2.11
RIF1-203ENST00000428287 KMT2DO14686 5537 aa1.88□□□□□ -2.11
RIF1-203ENST00000428287 LCE3CQ5T5A8 94 aa1.87□□□□□ -2.11
RIF1-203ENST00000428287 FSIP2Q5CZC0 6907 aa1.86□□□□□ -2.11
RIF1-203ENST00000428287 KRTAP10-7P60409 375 aaPredicted RBP1.84□□□□□ -2.11
RIF1-203ENST00000428287 MT1HP80294 61 aa1.83□□□□□ -2.12
RIF1-203ENST00000428287 KRTAP19-5Q3LI72 72 aa1.83□□□□□ -2.12
RIF1-203ENST00000428287 KRTAP9-3Q9BYQ3 159 aa1.82□□□□□ -2.12
RIF1-203ENST00000428287 KRTAP19-7Q3SYF9 63 aa1.8□□□□□ -2.12
RIF1-203ENST00000428287 J3QL48 77 aa1.79□□□□□ -2.12
RIF1-203ENST00000428287 FCGBPQ9Y6R7 5405 aaPredicted RBP1.75□□□□□ -2.13
RIF1-203ENST00000428287 M0R2T5 61 aa1.74□□□□□ -2.13
RIF1-203ENST00000428287 MT1LQ93083 61 aa1.72□□□□□ -2.13
RIF1-203ENST00000428287 LCE2BO14633 110 aa1.71□□□□□ -2.14
RIF1-203ENST00000428287 MUC12Q9UKN1 5478 aa1.68□□□□□ -2.14
RIF1-203ENST00000428287 KRTAP4-8A0A0G2JLE6 195 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms