RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 COX6B2Q6YFQ2 88 aa7.51□□□□□ -1.21
ERCC3-202ENST00000426778 LPAP08519 4548 aa7.51□□□□□ -1.21
ERCC3-202ENST00000426778 KRTAP21-3Q3LHN1 58 aa7.48□□□□□ -1.21
ERCC3-202ENST00000426778 RYR3Q15413 4870 aa7.46□□□□□ -1.22
ERCC3-202ENST00000426778 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
ERCC3-202ENST00000426778 A0A0D9SG42 100 aa7.45□□□□□ -1.22
ERCC3-202ENST00000426778 KIAA1109Q2LD37 5005 aa7.44□□□□□ -1.22
ERCC3-202ENST00000426778 LRP2P98164 4655 aa7.39□□□□□ -1.23
ERCC3-202ENST00000426778 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
ERCC3-202ENST00000426778 Q5VSD8 79 aa7.39□□□□□ -1.23
ERCC3-202ENST00000426778 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
ERCC3-202ENST00000426778 KRTAP17-1Q9BYP8 105 aa7.39□□□□□ -1.23
ERCC3-202ENST00000426778 RYR1P21817 5038 aa7.35□□□□□ -1.23
ERCC3-202ENST00000426778 KRTAP10-6P60371 365 aaPredicted RBP7.35□□□□□ -1.23
ERCC3-202ENST00000426778 XP32Q5T750 250 aa7.35□□□□□ -1.23
ERCC3-202ENST00000426778 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
ERCC3-202ENST00000426778 RPL37P61927 97 aaKnown RBP7.32□□□□□ -1.24
ERCC3-202ENST00000426778 K7ERS5 55 aa7.31□□□□□ -1.24
ERCC3-202ENST00000426778 P0C880 135 aa7.31□□□□□ -1.24
ERCC3-202ENST00000426778 S4R3F8 94 aa7.29□□□□□ -1.24
ERCC3-202ENST00000426778 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
ERCC3-202ENST00000426778 ABCA13Q86UQ4 5058 aa7.26□□□□□ -1.25
ERCC3-202ENST00000426778 EPPK1P58107 5090 aaKnown RBP7.22□□□□□ -1.25
ERCC3-202ENST00000426778 C10orf95Q9H7T3 257 aa7.2□□□□□ -1.26
ERCC3-202ENST00000426778 ROMO1P60602 79 aa7.19□□□□□ -1.26
ERCC3-202ENST00000426778 MT1HL1P0DM35 61 aa7.16□□□□□ -1.26
ERCC3-202ENST00000426778 KRTAP12-2P59991 146 aa7.14□□□□□ -1.27
ERCC3-202ENST00000426778 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
ERCC3-202ENST00000426778 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
ERCC3-202ENST00000426778 H3BS24 57 aa7.11□□□□□ -1.27
ERCC3-202ENST00000426778 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
ERCC3-202ENST00000426778 KRTAP4-5Q9BYR2 181 aa6.99□□□□□ -1.29
ERCC3-202ENST00000426778 MUC2Q02817 5179 aa6.98□□□□□ -1.29
ERCC3-202ENST00000426778 M0QZ58 72 aa6.9□□□□□ -1.31
ERCC3-202ENST00000426778 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
ERCC3-202ENST00000426778 LORP23490 312 aaPredicted RBP6.86□□□□□ -1.31
ERCC3-202ENST00000426778 R4GN34 69 aa6.83□□□□□ -1.32
ERCC3-202ENST00000426778 KRTAP4-1Q9BYQ7 146 aa6.8□□□□□ -1.32
ERCC3-202ENST00000426778 HERC2O95714 4834 aa6.79□□□□□ -1.32
ERCC3-202ENST00000426778 A0A0A0MQY5 61 aa6.77□□□□□ -1.33
ERCC3-202ENST00000426778 NDUFAF8A1L188 74 aa6.73□□□□□ -1.33
ERCC3-202ENST00000426778 KRTAP15-1Q3LI76 137 aa6.71□□□□□ -1.33
ERCC3-202ENST00000426778 SEC61BP60468 96 aaKnown RBP6.66□□□□□ -1.34
ERCC3-202ENST00000426778 J3QL48 77 aa6.66□□□□□ -1.34
ERCC3-202ENST00000426778 HERC1Q15751 4861 aa6.62□□□□□ -1.35
ERCC3-202ENST00000426778 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
ERCC3-202ENST00000426778 PCLOQ9Y6V0 5065 aa6.6□□□□□ -1.35
ERCC3-202ENST00000426778 KRTAP19-2Q3LHN2 52 aa6.54□□□□□ -1.36
ERCC3-202ENST00000426778 CAMK2N1Q7Z7J9 78 aa6.52□□□□□ -1.37
ERCC3-202ENST00000426778 FLGP20930 4061 aaPredicted RBP6.51□□□□□ -1.37
ERCC3-202ENST00000426778 BIRC6Q9NR09 4857 aa6.45□□□□□ -1.38
ERCC3-202ENST00000426778 RNF213Q63HN8 5207 aa6.44□□□□□ -1.38
ERCC3-202ENST00000426778 PLAC4Q8WY50 150 aa6.43□□□□□ -1.38
ERCC3-202ENST00000426778 HMCN2Q8NDA2 5059 aa6.35□□□□□ -1.39
ERCC3-202ENST00000426778 UBR4Q5T4S7 5183 aa6.29□□□□□ -1.4
ERCC3-202ENST00000426778 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
ERCC3-202ENST00000426778 TNP1P09430 55 aa6.18□□□□□ -1.42
ERCC3-202ENST00000426778 M0R2T5 61 aa6.16□□□□□ -1.42
ERCC3-202ENST00000426778 LCE2CQ5TA81 110 aa6.15□□□□□ -1.42
ERCC3-202ENST00000426778 LUZP6Q538Z0 58 aa6.12□□□□□ -1.43
ERCC3-202ENST00000426778 KRTAP19-1Q8IUB9 90 aa6.07□□□□□ -1.44
ERCC3-202ENST00000426778 KRTAP10-10P60014 251 aa5.99□□□□□ -1.45
ERCC3-202ENST00000426778 MT1HP80294 61 aa5.99□□□□□ -1.45
ERCC3-202ENST00000426778 SPRR2GQ9BYE4 73 aa5.99□□□□□ -1.45
ERCC3-202ENST00000426778 MT1FP04733 61 aa5.97□□□□□ -1.45
ERCC3-202ENST00000426778 LCE3AQ5TA76 89 aa5.95□□□□□ -1.46
ERCC3-202ENST00000426778 MT2AP02795 61 aa5.93□□□□□ -1.46
ERCC3-202ENST00000426778 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
ERCC3-202ENST00000426778 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
ERCC3-202ENST00000426778 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
ERCC3-202ENST00000426778 USH2AO75445 5202 aa5.82□□□□□ -1.48
ERCC3-202ENST00000426778 KMT2DO14686 5537 aa5.76□□□□□ -1.49
ERCC3-202ENST00000426778 MT1BP07438 61 aa5.74□□□□□ -1.49
ERCC3-202ENST00000426778 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
ERCC3-202ENST00000426778 MT1XP80297 61 aa5.72□□□□□ -1.49
ERCC3-202ENST00000426778 KRTAP19-8Q3LI54 63 aa5.68□□□□□ -1.5
ERCC3-202ENST00000426778 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
ERCC3-202ENST00000426778 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
ERCC3-202ENST00000426778 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
ERCC3-202ENST00000426778 KRTAP12-3P60328 96 aa5.6□□□□□ -1.51
ERCC3-202ENST00000426778 KRTAP9-3Q9BYQ3 159 aa5.58□□□□□ -1.52
ERCC3-202ENST00000426778 LCE2BO14633 110 aa5.44□□□□□ -1.54
ERCC3-202ENST00000426778 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
ERCC3-202ENST00000426778 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
ERCC3-202ENST00000426778 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
ERCC3-202ENST00000426778 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
ERCC3-202ENST00000426778 FSIP2Q5CZC0 6907 aa5.36□□□□□ -1.55
ERCC3-202ENST00000426778 LCE3CQ5T5A8 94 aa5.25□□□□□ -1.57
ERCC3-202ENST00000426778 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
ERCC3-202ENST00000426778 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
ERCC3-202ENST00000426778 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.59
ERCC3-202ENST00000426778 SSPOA2VEC9 5147 aa5.14□□□□□ -1.59
ERCC3-202ENST00000426778 INE1O15225 51 aa5.12□□□□□ -1.59
ERCC3-202ENST00000426778 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
ERCC3-202ENST00000426778 MUC12Q9UKN1 5478 aa5.02□□□□□ -1.61
ERCC3-202ENST00000426778 FCGBPQ9Y6R7 5405 aaPredicted RBP5.01□□□□□ -1.61
ERCC3-202ENST00000426778 MT1LQ93083 61 aa4.94□□□□□ -1.62
ERCC3-202ENST00000426778 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
ERCC3-202ENST00000426778 MT1EP04732 61 aa4.92□□□□□ -1.62
ERCC3-202ENST00000426778 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms