RNA–Protein interactions for RNA: ENST00000425835.6

HDAC2-202, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-202ENST00000425835 HECTD1Q9ULT8 2610 aa1.03□□□□□ -2.24
HDAC2-202ENST00000425835 ANK3Q12955 4377 aaKnown RBP1.03□□□□□ -2.25
HDAC2-202ENST00000425835 SPG11Q96JI7 2443 aa1.03□□□□□ -2.25
HDAC2-202ENST00000425835 TRRAPQ9Y4A5 3859 aa1.02□□□□□ -2.25
HDAC2-202ENST00000425835 USP9YO00507 2555 aaPredicted RBP1.02□□□□□ -2.25
HDAC2-202ENST00000425835 UBR5O95071 2799 aaPredicted RBP1.02□□□□□ -2.25
HDAC2-202ENST00000425835 FN1P02751 2386 aaKnown RBP1.02□□□□□ -2.25
HDAC2-202ENST00000425835 APCP25054 2843 aa1.02□□□□□ -2.25
HDAC2-202ENST00000425835 JMJD1CQ15652 2540 aa1.02□□□□□ -2.25
HDAC2-202ENST00000425835 DOPEY1Q5JWR5 2465 aa1.02□□□□□ -2.25
HDAC2-202ENST00000425835 ABCA12Q86UK0 2595 aa1.02□□□□□ -2.25
HDAC2-202ENST00000425835 MYO18BQ8IUG5 2567 aa1.02□□□□□ -2.25
HDAC2-202ENST00000425835 PDZD2O15018 2839 aa1.02□□□□□ -2.25
HDAC2-202ENST00000425835 CENPEQ02224 2701 aa1.02□□□□□ -2.25
HDAC2-202ENST00000425835 HELZ2Q9BYK8 2649 aaKnown RBP1.02□□□□□ -2.25
HDAC2-202ENST00000425835 FASNP49327 2511 aaKnown RBP1.01□□□□□ -2.25
HDAC2-202ENST00000425835 LRRK2Q5S007 2527 aa1.01□□□□□ -2.25
HDAC2-202ENST00000425835 FLG2Q5D862 2391 aaPredicted RBP1.01□□□□□ -2.25
HDAC2-202ENST00000425835 ANK2Q01484 3957 aa1.01□□□□□ -2.25
HDAC2-202ENST00000425835 CUBNO60494 3623 aa1.01□□□□□ -2.25
HDAC2-202ENST00000425835 NBEAL2Q6ZNJ1 2754 aa1.01□□□□□ -2.25
HDAC2-202ENST00000425835 MYO9AB2RTY4 2548 aa1.01□□□□□ -2.25
HDAC2-202ENST00000425835 CSMD3Q7Z407 3707 aa1.01□□□□□ -2.25
HDAC2-202ENST00000425835 PTPN13Q12923 2485 aa1.01□□□□□ -2.25
HDAC2-202ENST00000425835 ACANP16112 2415 aa1.01□□□□□ -2.25
HDAC2-202ENST00000425835 CSPG4Q6UVK1 2322 aa1.01□□□□□ -2.25
HDAC2-202ENST00000425835 LYSTQ99698 3801 aa1.01□□□□□ -2.25
HDAC2-202ENST00000425835 VWFP04275 2813 aa1.01□□□□□ -2.25
HDAC2-202ENST00000425835 NAV2Q8IVL1 2488 aa1□□□□□ -2.25
HDAC2-202ENST00000425835 F8P00451 2351 aa1□□□□□ -2.25
HDAC2-202ENST00000425835 MYCBP2O75592 4640 aa1□□□□□ -2.25
HDAC2-202ENST00000425835 DNAH8Q96JB1 4490 aa1□□□□□ -2.25
HDAC2-202ENST00000425835 KRTAP21-3Q3LHN1 58 aa1□□□□□ -2.25
HDAC2-202ENST00000425835 FBN3Q75N90 2809 aa1□□□□□ -2.25
HDAC2-202ENST00000425835 MXRA5Q9NR99 2828 aa1□□□□□ -2.25
HDAC2-202ENST00000425835 ZANQ9Y493 2812 aa1□□□□□ -2.25
HDAC2-202ENST00000425835 SRRM2Q9UQ35 2752 aaKnown RBP1□□□□□ -2.25
HDAC2-202ENST00000425835 HIVEP1P15822 2718 aa1□□□□□ -2.25
HDAC2-202ENST00000425835 ITPR2Q14571 2701 aa1□□□□□ -2.25
HDAC2-202ENST00000425835 ITPR3Q14573 2671 aa1□□□□□ -2.25
HDAC2-202ENST00000425835 CCDC168Q8NDH2 2452 aa0.99□□□□□ -2.25
HDAC2-202ENST00000425835 UNC79Q9P2D8 2635 aa0.99□□□□□ -2.25
HDAC2-202ENST00000425835 C9orf92A6NGG3 77 aa0.99□□□□□ -2.25
HDAC2-202ENST00000425835 TNP1P09430 55 aa0.99□□□□□ -2.25
HDAC2-202ENST00000425835 SONP18583 2426 aaKnown RBP0.99□□□□□ -2.25
HDAC2-202ENST00000425835 MEGF8Q7Z7M0 2845 aa0.99□□□□□ -2.25
HDAC2-202ENST00000425835 CSMD2Q7Z408 3487 aa0.99□□□□□ -2.25
HDAC2-202ENST00000425835 TEP1Q99973 2627 aaKnown RBP0.99□□□□□ -2.25
HDAC2-202ENST00000425835 FLNBO75369 2602 aaKnown RBP0.98□□□□□ -2.25
HDAC2-202ENST00000425835 FLNAP21333 2647 aaKnown RBP0.98□□□□□ -2.25
HDAC2-202ENST00000425835 MTORP42345 2549 aa0.98□□□□□ -2.25
HDAC2-202ENST00000425835 DYNC2H1Q8NCM8 4307 aaKnown RBP0.97□□□□□ -2.25
HDAC2-202ENST00000425835 DNAH9Q9NYC9 4486 aa0.97□□□□□ -2.25
HDAC2-202ENST00000425835 TGP01266 2768 aa0.97□□□□□ -2.25
HDAC2-202ENST00000425835 FRAS1Q86XX4 4008 aa0.97□□□□□ -2.25
HDAC2-202ENST00000425835 DNAH10Q8IVF4 4471 aa0.97□□□□□ -2.25
HDAC2-202ENST00000425835 DNAH17Q9UFH2 4485 aa0.97□□□□□ -2.25
HDAC2-202ENST00000425835 DNAH11Q96DT5 4516 aa0.96□□□□□ -2.26
HDAC2-202ENST00000425835 HECTD4Q9Y4D8 3996 aa0.96□□□□□ -2.26
HDAC2-202ENST00000425835 SETD2Q9BYW2 2564 aaPredicted RBP0.96□□□□□ -2.26
HDAC2-202ENST00000425835 DNAH3Q8TD57 4116 aa0.95□□□□□ -2.26
HDAC2-202ENST00000425835 TENM1Q9UKZ4 2725 aa0.95□□□□□ -2.26
HDAC2-202ENST00000425835 DNAH2Q9P225 4427 aa0.95□□□□□ -2.26
HDAC2-202ENST00000425835 NBEAL1Q6ZS30 2694 aa0.94□□□□□ -2.26
HDAC2-202ENST00000425835 PRKDCP78527 4128 aaKnown RBP0.94□□□□□ -2.26
HDAC2-202ENST00000425835 DNAH6Q9C0G6 4158 aa0.94□□□□□ -2.26
HDAC2-202ENST00000425835 NSD1Q96L73 2696 aaPredicted RBP0.94□□□□□ -2.26
HDAC2-202ENST00000425835 ZNF469Q96JG9 3925 aaPredicted RBP0.94□□□□□ -2.26
HDAC2-202ENST00000425835 DNAH7Q8WXX0 4024 aa0.94□□□□□ -2.26
HDAC2-202ENST00000425835 MAST4O15021 2626 aa0.94□□□□□ -2.26
HDAC2-202ENST00000425835 COL7A1Q02388 2944 aa0.94□□□□□ -2.26
HDAC2-202ENST00000425835 COL6A5A8TX70 2615 aa0.93□□□□□ -2.26
HDAC2-202ENST00000425835 STAB1Q9NY15 2570 aa0.93□□□□□ -2.26
HDAC2-202ENST00000425835 KMT2AQ03164 3969 aa0.93□□□□□ -2.26
HDAC2-202ENST00000425835 HUWE1Q7Z6Z7 4374 aaKnown RBP0.93□□□□□ -2.26
HDAC2-202ENST00000425835 CMYA5Q8N3K9 4069 aa0.93□□□□□ -2.26
HDAC2-202ENST00000425835 ATRQ13535 2644 aa0.92□□□□□ -2.26
HDAC2-202ENST00000425835 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
HDAC2-202ENST00000425835 STAB2Q8WWQ8 2551 aa0.91□□□□□ -2.26
HDAC2-202ENST00000425835 TENM3Q9P273 2699 aa0.91□□□□□ -2.26
HDAC2-202ENST00000425835 SACSQ9NZJ4 4579 aa0.9□□□□□ -2.26
HDAC2-202ENST00000425835 PKD1L1Q8TDX9 2849 aa0.9□□□□□ -2.26
HDAC2-202ENST00000425835 APOBP04114 4563 aaKnown RBP0.9□□□□□ -2.27
HDAC2-202ENST00000425835 NOTCH1P46531 2555 aa0.9□□□□□ -2.27
HDAC2-202ENST00000425835 PKHD1L1Q86WI1 4243 aa0.88□□□□□ -2.27
HDAC2-202ENST00000425835 MGAM2Q2M2H8 2515 aa0.88□□□□□ -2.27
HDAC2-202ENST00000425835 STARD9Q9P2P6 4700 aa0.88□□□□□ -2.27
HDAC2-202ENST00000425835 PLECQ15149 4684 aaKnown RBP0.88□□□□□ -2.27
HDAC2-202ENST00000425835 LRP1Q07954 4544 aaKnown RBP0.87□□□□□ -2.27
HDAC2-202ENST00000425835 LRP1BQ9NZR2 4599 aa0.87□□□□□ -2.27
HDAC2-202ENST00000425835 KRTAP8-1Q8IUC2 63 aa0.87□□□□□ -2.27
HDAC2-202ENST00000425835 DNAH5Q8TE73 4624 aa0.87□□□□□ -2.27
HDAC2-202ENST00000425835 DMBT1Q9UGM3 2413 aaPredicted RBP0.85□□□□□ -2.27
HDAC2-202ENST00000425835 KRTAP10-4P60372 401 aaPredicted RBP0.85□□□□□ -2.27
HDAC2-202ENST00000425835 FAT2Q9NYQ8 4349 aa0.85□□□□□ -2.27
HDAC2-202ENST00000425835 PKHD1P08F94 4074 aa0.84□□□□□ -2.27
HDAC2-202ENST00000425835 FAT3Q8TDW7 4589 aa0.84□□□□□ -2.27
HDAC2-202ENST00000425835 DYNC1H1Q14204 4646 aaKnown RBP0.84□□□□□ -2.27
HDAC2-202ENST00000425835 TNXBP22105 4242 aa0.84□□□□□ -2.28
HDAC2-202ENST00000425835 DNHD1Q96M86 4753 aa0.84□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms