RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 KRTAP4-1Q9BYQ7 146 aa0.97□□□□□ -2.25
PMS1-209ENST00000424059 DEFB4AO15263 64 aa0.96□□□□□ -2.26
PMS1-209ENST00000424059 LAMA1P25391 3075 aa0.96□□□□□ -2.26
PMS1-209ENST00000424059 DEFB135Q30KP9 77 aa0.96□□□□□ -2.26
PMS1-209ENST00000424059 UNC80Q8N2C7 3258 aa0.96□□□□□ -2.26
PMS1-209ENST00000424059 DNAH1Q9P2D7 4330 aa0.96□□□□□ -2.26
PMS1-209ENST00000424059 ANK2Q01484 3957 aa0.96□□□□□ -2.26
PMS1-209ENST00000424059 PTPN13Q12923 2485 aa0.96□□□□□ -2.26
PMS1-209ENST00000424059 PKHD1L1Q86WI1 4243 aa0.96□□□□□ -2.26
PMS1-209ENST00000424059 HECTD1Q9ULT8 2610 aa0.96□□□□□ -2.26
PMS1-209ENST00000424059 KMT2DO14686 5537 aa0.95□□□□□ -2.26
PMS1-209ENST00000424059 DNAH7Q8WXX0 4024 aa0.95□□□□□ -2.26
PMS1-209ENST00000424059 CSMD1Q96PZ7 3565 aa0.95□□□□□ -2.26
PMS1-209ENST00000424059 TRRAPQ9Y4A5 3859 aa0.95□□□□□ -2.26
PMS1-209ENST00000424059 NCOR2Q9Y618 2525 aa0.95□□□□□ -2.26
PMS1-209ENST00000424059 PRKDCP78527 4128 aaKnown RBP0.95□□□□□ -2.26
PMS1-209ENST00000424059 EP400Q96L91 3159 aa0.95□□□□□ -2.26
PMS1-209ENST00000424059 TEP1Q99973 2627 aaKnown RBP0.94□□□□□ -2.26
PMS1-209ENST00000424059 SMR3AQ99954 134 aa0.94□□□□□ -2.26
PMS1-209ENST00000424059 PIEZO1Q92508 2521 aa0.94□□□□□ -2.26
PMS1-209ENST00000424059 LOC400499M0QZD8 3231 aa0.94□□□□□ -2.26
PMS1-209ENST00000424059 ZNF469Q96JG9 3925 aaPredicted RBP0.94□□□□□ -2.26
PMS1-209ENST00000424059 KRTAP10-4P60372 401 aaPredicted RBP0.94□□□□□ -2.26
PMS1-209ENST00000424059 NIPBLQ6KC79 2804 aaeCLIP0.94□□□□□ -2.26
PMS1-209ENST00000424059 SPG11Q96JI7 2443 aa0.94□□□□□ -2.26
PMS1-209ENST00000424059 MUC3AQ02505 3323 aa0.94□□□□□ -2.26
PMS1-209ENST00000424059 USP9YO00507 2555 aaPredicted RBP0.93□□□□□ -2.26
PMS1-209ENST00000424059 RPS29P62273 56 aaKnown RBP0.93□□□□□ -2.26
PMS1-209ENST00000424059 XIRP2A4UGR9 3374 aa0.93□□□□□ -2.26
PMS1-209ENST00000424059 ANK3Q12955 4377 aaKnown RBP0.93□□□□□ -2.26
PMS1-209ENST00000424059 DNAH9Q9NYC9 4486 aa0.93□□□□□ -2.26
PMS1-209ENST00000424059 FAT3Q8TDW7 4589 aa0.93□□□□□ -2.26
PMS1-209ENST00000424059 CMYA5Q8N3K9 4069 aa0.93□□□□□ -2.26
PMS1-209ENST00000424059 TENM4Q6N022 2769 aa0.93□□□□□ -2.26
PMS1-209ENST00000424059 APOBP04114 4563 aaKnown RBP0.92□□□□□ -2.26
PMS1-209ENST00000424059 DNAH17Q9UFH2 4485 aa0.92□□□□□ -2.26
PMS1-209ENST00000424059 FAM186AA6NE01 2351 aa0.92□□□□□ -2.26
PMS1-209ENST00000424059 C9orf92A6NGG3 77 aa0.92□□□□□ -2.26
PMS1-209ENST00000424059 PKD1P98161 4303 aa0.92□□□□□ -2.26
PMS1-209ENST00000424059 HUWE1Q7Z6Z7 4374 aaKnown RBP0.92□□□□□ -2.26
PMS1-209ENST00000424059 APCP25054 2843 aa0.92□□□□□ -2.26
PMS1-209ENST00000424059 M0R2T5 61 aa0.91□□□□□ -2.26
PMS1-209ENST00000424059 KRTAP8-1Q8IUC2 63 aa0.91□□□□□ -2.26
PMS1-209ENST00000424059 RIF1Q5UIP0 2472 aaKnown RBP0.91□□□□□ -2.26
PMS1-209ENST00000424059 FBN2P35556 2912 aa0.91□□□□□ -2.26
PMS1-209ENST00000424059 ASPMQ8IZT6 3477 aa0.91□□□□□ -2.26
PMS1-209ENST00000424059 HSPG2P98160 4391 aa0.91□□□□□ -2.26
PMS1-209ENST00000424059 FLGP20930 4061 aaPredicted RBP0.91□□□□□ -2.26
PMS1-209ENST00000424059 CSMD2Q7Z408 3487 aa0.91□□□□□ -2.26
PMS1-209ENST00000424059 LAMA3Q16787 3333 aa0.91□□□□□ -2.26
PMS1-209ENST00000424059 VCANP13611 3396 aa0.91□□□□□ -2.26
PMS1-209ENST00000424059 ZANQ9Y493 2812 aa0.9□□□□□ -2.26
PMS1-209ENST00000424059 SONP18583 2426 aaKnown RBP0.9□□□□□ -2.27
PMS1-209ENST00000424059 LRRK2Q5S007 2527 aa0.9□□□□□ -2.27
PMS1-209ENST00000424059 ATRQ13535 2644 aa0.9□□□□□ -2.27
PMS1-209ENST00000424059 TACC2O95359 2948 aa0.9□□□□□ -2.27
PMS1-209ENST00000424059 TEX15Q9BXT5 2789 aa0.9□□□□□ -2.27
PMS1-209ENST00000424059 FCGBPQ9Y6R7 5405 aaPredicted RBP0.9□□□□□ -2.27
PMS1-209ENST00000424059 KRTAP5-10Q6L8G5 202 aa0.89□□□□□ -2.27
PMS1-209ENST00000424059 UTP20O75691 2785 aaKnown RBP0.89□□□□□ -2.27
PMS1-209ENST00000424059 DNAH6Q9C0G6 4158 aa0.89□□□□□ -2.27
PMS1-209ENST00000424059 POLQO75417 2590 aa0.89□□□□□ -2.27
PMS1-209ENST00000424059 BRCA2P51587 3418 aa0.89□□□□□ -2.27
PMS1-209ENST00000424059 TGP01266 2768 aa0.89□□□□□ -2.27
PMS1-209ENST00000424059 SETXQ7Z333 2677 aaKnown RBP0.89□□□□□ -2.27
PMS1-209ENST00000424059 HECTD4Q9Y4D8 3996 aa0.88□□□□□ -2.27
PMS1-209ENST00000424059 WDFY3Q8IZQ1 3526 aa0.88□□□□□ -2.27
PMS1-209ENST00000424059 FAT2Q9NYQ8 4349 aa0.88□□□□□ -2.27
PMS1-209ENST00000424059 J3QKU1 62 aa0.88□□□□□ -2.27
PMS1-209ENST00000424059 FBN3Q75N90 2809 aa0.88□□□□□ -2.27
PMS1-209ENST00000424059 SVEP1Q4LDE5 3571 aa0.88□□□□□ -2.27
PMS1-209ENST00000424059 BDP1A6H8Y1 2624 aa0.88□□□□□ -2.27
PMS1-209ENST00000424059 DNAH5Q8TE73 4624 aa0.87□□□□□ -2.27
PMS1-209ENST00000424059 PLECQ15149 4684 aaKnown RBP0.87□□□□□ -2.27
PMS1-209ENST00000424059 FLNCQ14315 2725 aa0.87□□□□□ -2.27
PMS1-209ENST00000424059 DNAH14Q0VDD8 3507 aa0.87□□□□□ -2.27
PMS1-209ENST00000424059 EPG5Q9HCE0 2579 aa0.86□□□□□ -2.27
PMS1-209ENST00000424059 MXRA5Q9NR99 2828 aa0.86□□□□□ -2.27
PMS1-209ENST00000424059 ADGRG4Q8IZF6 3080 aa0.86□□□□□ -2.27
PMS1-209ENST00000424059 CFAP46Q8IYW2 2715 aa0.86□□□□□ -2.27
PMS1-209ENST00000424059 CUBNO60494 3623 aa0.86□□□□□ -2.27
PMS1-209ENST00000424059 TNXBP22105 4242 aa0.86□□□□□ -2.27
PMS1-209ENST00000424059 GCN1Q92616 2671 aaKnown RBP0.86□□□□□ -2.27
PMS1-209ENST00000424059 NBEAL2Q6ZNJ1 2754 aa0.85□□□□□ -2.27
PMS1-209ENST00000424059 PKD1L1Q8TDX9 2849 aa0.85□□□□□ -2.27
PMS1-209ENST00000424059 ITPR2Q14571 2701 aa0.85□□□□□ -2.27
PMS1-209ENST00000424059 SMR3BP02814 79 aaPredicted RBP0.84□□□□□ -2.27
PMS1-209ENST00000424059 MYO15AQ9UKN7 3530 aa0.84□□□□□ -2.27
PMS1-209ENST00000424059 LRP1Q07954 4544 aaKnown RBP0.84□□□□□ -2.27
PMS1-209ENST00000424059 ACANP16112 2415 aa0.84□□□□□ -2.27
PMS1-209ENST00000424059 PRM1P04553 51 aa0.84□□□□□ -2.28
PMS1-209ENST00000424059 USP9XQ93008 2570 aaPredicted RBP0.83□□□□□ -2.28
PMS1-209ENST00000424059 SSPOA2VEC9 5147 aa0.83□□□□□ -2.28
PMS1-209ENST00000424059 CENPEQ02224 2701 aa0.83□□□□□ -2.28
PMS1-209ENST00000424059 VPS13CQ709C8 3753 aa0.83□□□□□ -2.28
PMS1-209ENST00000424059 CHD8Q9HCK8 2581 aa0.83□□□□□ -2.28
PMS1-209ENST00000424059 HIVEP1P15822 2718 aa0.82□□□□□ -2.28
PMS1-209ENST00000424059 RYR2Q92736 4967 aa0.82□□□□□ -2.28
PMS1-209ENST00000424059 HRNRQ86YZ3 2850 aaPredicted RBP0.82□□□□□ -2.28
PMS1-209ENST00000424059 DOPEY1Q5JWR5 2465 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms