RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
NPC1L1-203ENST00000423141 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
NPC1L1-203ENST00000423141 HSPG2P98160 4391 aa8.59□□□□□ -1.03
NPC1L1-203ENST00000423141 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
NPC1L1-203ENST00000423141 C10orf95Q9H7T3 257 aa8.57□□□□□ -1.04
NPC1L1-203ENST00000423141 KRTAP21-3Q3LHN1 58 aa8.56□□□□□ -1.04
NPC1L1-203ENST00000423141 KRTAP10-4P60372 401 aaPredicted RBP8.56□□□□□ -1.04
NPC1L1-203ENST00000423141 FAT3Q8TDW7 4589 aa8.55□□□□□ -1.04
NPC1L1-203ENST00000423141 SPINT4Q6UDR6 99 aa8.53□□□□□ -1.04
NPC1L1-203ENST00000423141 MYCBP2O75592 4640 aa8.52□□□□□ -1.05
NPC1L1-203ENST00000423141 LRP1Q07954 4544 aaKnown RBP8.5□□□□□ -1.05
NPC1L1-203ENST00000423141 KRTAP10-8P60410 259 aa8.49□□□□□ -1.05
NPC1L1-203ENST00000423141 S4R3F8 94 aa8.43□□□□□ -1.06
NPC1L1-203ENST00000423141 TNXBP22105 4242 aa8.43□□□□□ -1.06
NPC1L1-203ENST00000423141 KRTAP12-2P59991 146 aa8.42□□□□□ -1.06
NPC1L1-203ENST00000423141 KRTAP15-1Q3LI76 137 aa8.36□□□□□ -1.07
NPC1L1-203ENST00000423141 NDUFAF8A1L188 74 aa8.34□□□□□ -1.07
NPC1L1-203ENST00000423141 A0A1B0GVY2 172 aa8.33□□□□□ -1.08
NPC1L1-203ENST00000423141 XP32Q5T750 250 aa8.3□□□□□ -1.08
NPC1L1-203ENST00000423141 KRTAP12-1P59990 96 aa8.29□□□□□ -1.08
NPC1L1-203ENST00000423141 LPAP08519 4548 aa8.29□□□□□ -1.08
NPC1L1-203ENST00000423141 KMT2CQ8NEZ4 4911 aaKnown RBP8.23□□□□□ -1.09
NPC1L1-203ENST00000423141 RYR2Q92736 4967 aa8.2□□□□□ -1.1
NPC1L1-203ENST00000423141 LRP2P98164 4655 aa8.11□□□□□ -1.11
NPC1L1-203ENST00000423141 M0QZ58 72 aa8.06□□□□□ -1.12
NPC1L1-203ENST00000423141 Q5VSD8 79 aa8.03□□□□□ -1.12
NPC1L1-203ENST00000423141 KRTAP17-1Q9BYP8 105 aa7.96□□□□□ -1.14
NPC1L1-203ENST00000423141 RYR1P21817 5038 aa7.96□□□□□ -1.14
NPC1L1-203ENST00000423141 MT1HL1P0DM35 61 aa7.89□□□□□ -1.15
NPC1L1-203ENST00000423141 KIAA1109Q2LD37 5005 aa7.87□□□□□ -1.15
NPC1L1-203ENST00000423141 R4GN34 69 aa7.86□□□□□ -1.15
NPC1L1-203ENST00000423141 RYR3Q15413 4870 aa7.83□□□□□ -1.16
NPC1L1-203ENST00000423141 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
NPC1L1-203ENST00000423141 PLAC4Q8WY50 150 aa7.81□□□□□ -1.16
NPC1L1-203ENST00000423141 ABCA13Q86UQ4 5058 aa7.81□□□□□ -1.16
NPC1L1-203ENST00000423141 A0A0A0MQY5 61 aa7.8□□□□□ -1.16
NPC1L1-203ENST00000423141 MUC17Q685J3 4493 aa7.68□□□□□ -1.18
NPC1L1-203ENST00000423141 LUZP6Q538Z0 58 aa7.54□□□□□ -1.2
NPC1L1-203ENST00000423141 KRTAP4-1Q9BYQ7 146 aa7.53□□□□□ -1.2
NPC1L1-203ENST00000423141 CAMK2N1Q7Z7J9 78 aa7.52□□□□□ -1.21
NPC1L1-203ENST00000423141 EPPK1P58107 5090 aaKnown RBP7.52□□□□□ -1.21
NPC1L1-203ENST00000423141 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
NPC1L1-203ENST00000423141 MUC2Q02817 5179 aa7.43□□□□□ -1.22
NPC1L1-203ENST00000423141 SEC61BP60468 96 aaKnown RBP7.43□□□□□ -1.22
NPC1L1-203ENST00000423141 KRTAP19-2Q3LHN2 52 aa7.39□□□□□ -1.23
NPC1L1-203ENST00000423141 KRTAP4-5Q9BYR2 181 aa7.39□□□□□ -1.23
NPC1L1-203ENST00000423141 FLGP20930 4061 aaPredicted RBP7.26□□□□□ -1.25
NPC1L1-203ENST00000423141 TNP1P09430 55 aa7.23□□□□□ -1.25
NPC1L1-203ENST00000423141 PCLOQ9Y6V0 5065 aa7.21□□□□□ -1.25
NPC1L1-203ENST00000423141 SPRR5A0A1B0GTR4 108 aa7.18□□□□□ -1.26
NPC1L1-203ENST00000423141 HERC1Q15751 4861 aa7.13□□□□□ -1.27
NPC1L1-203ENST00000423141 HERC2O95714 4834 aa7.13□□□□□ -1.27
NPC1L1-203ENST00000423141 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
NPC1L1-203ENST00000423141 J3QL48 77 aa7.06□□□□□ -1.28
NPC1L1-203ENST00000423141 FAT4Q6V0I7 4981 aa7.04□□□□□ -1.28
NPC1L1-203ENST00000423141 BIRC6Q9NR09 4857 aa7.03□□□□□ -1.28
NPC1L1-203ENST00000423141 LCE3AQ5TA76 89 aa6.9□□□□□ -1.31
NPC1L1-203ENST00000423141 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
NPC1L1-203ENST00000423141 SPRR2GQ9BYE4 73 aa6.85□□□□□ -1.31
NPC1L1-203ENST00000423141 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
NPC1L1-203ENST00000423141 HMCN2Q8NDA2 5059 aa6.77□□□□□ -1.33
NPC1L1-203ENST00000423141 UBR4Q5T4S7 5183 aa6.73□□□□□ -1.33
NPC1L1-203ENST00000423141 RNF213Q63HN8 5207 aa6.68□□□□□ -1.34
NPC1L1-203ENST00000423141 PRO2289Q9P1D8 64 aa6.67□□□□□ -1.34
NPC1L1-203ENST00000423141 M0R2T5 61 aa6.66□□□□□ -1.34
NPC1L1-203ENST00000423141 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
NPC1L1-203ENST00000423141 MT1FP04733 61 aa6.62□□□□□ -1.35
NPC1L1-203ENST00000423141 KRTAP10-10P60014 251 aa6.59□□□□□ -1.36
NPC1L1-203ENST00000423141 MT2AP02795 61 aa6.57□□□□□ -1.36
NPC1L1-203ENST00000423141 MT1HP80294 61 aa6.57□□□□□ -1.36
NPC1L1-203ENST00000423141 INE1O15225 51 aa6.53□□□□□ -1.36
NPC1L1-203ENST00000423141 KRTAP10-5P60370 271 aa6.52□□□□□ -1.37
NPC1L1-203ENST00000423141 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
NPC1L1-203ENST00000423141 MT1XP80297 61 aa6.5□□□□□ -1.37
NPC1L1-203ENST00000423141 KRTAP9-8Q9BYQ0 159 aa6.48□□□□□ -1.37
NPC1L1-203ENST00000423141 KRTAP19-8Q3LI54 63 aa6.47□□□□□ -1.37
NPC1L1-203ENST00000423141 KRTAP10-12P60413 245 aa6.46□□□□□ -1.38
NPC1L1-203ENST00000423141 MT1BP07438 61 aa6.45□□□□□ -1.38
NPC1L1-203ENST00000423141 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.39
NPC1L1-203ENST00000423141 KMT2DO14686 5537 aa6.23□□□□□ -1.41
NPC1L1-203ENST00000423141 KRTAP9-3Q9BYQ3 159 aa6.17□□□□□ -1.42
NPC1L1-203ENST00000423141 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
NPC1L1-203ENST00000423141 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
NPC1L1-203ENST00000423141 USH2AO75445 5202 aa6.14□□□□□ -1.43
NPC1L1-203ENST00000423141 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
NPC1L1-203ENST00000423141 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
NPC1L1-203ENST00000423141 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
NPC1L1-203ENST00000423141 LCE2BO14633 110 aa5.92□□□□□ -1.46
NPC1L1-203ENST00000423141 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.46
NPC1L1-203ENST00000423141 KRTAP2-3P0C7H8 128 aa5.86□□□□□ -1.47
NPC1L1-203ENST00000423141 KRTAP2-4Q9BYR9 128 aa5.86□□□□□ -1.47
NPC1L1-203ENST00000423141 KRTAP2-1Q9BYU5 128 aa5.86□□□□□ -1.47
NPC1L1-203ENST00000423141 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
NPC1L1-203ENST00000423141 MT1LQ93083 61 aa5.63□□□□□ -1.51
NPC1L1-203ENST00000423141 MT1EP04732 61 aa5.58□□□□□ -1.52
NPC1L1-203ENST00000423141 LCE2AQ5TA79 106 aaPredicted RBP5.51□□□□□ -1.53
NPC1L1-203ENST00000423141 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
NPC1L1-203ENST00000423141 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
NPC1L1-203ENST00000423141 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
NPC1L1-203ENST00000423141 SSPOA2VEC9 5147 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms