RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 HSPG2P98160 4391 aa7.2□□□□□ -1.26
CTCFL-203ENST00000422109 FAT3Q8TDW7 4589 aa7.19□□□□□ -1.26
CTCFL-203ENST00000422109 H1FX-AS1Q4G0G2 97 aa7.17□□□□□ -1.26
CTCFL-203ENST00000422109 KRTAP17-1Q9BYP8 105 aa7.17□□□□□ -1.26
CTCFL-203ENST00000422109 TNXBP22105 4242 aa7.15□□□□□ -1.26
CTCFL-203ENST00000422109 KRTAP10-8P60410 259 aa7.15□□□□□ -1.27
CTCFL-203ENST00000422109 ROMO1P60602 79 aa7.12□□□□□ -1.27
CTCFL-203ENST00000422109 CRIPTQ9P021 101 aa7.12□□□□□ -1.27
CTCFL-203ENST00000422109 XP32Q5T750 250 aa7.11□□□□□ -1.27
CTCFL-203ENST00000422109 RYR3Q15413 4870 aa7.11□□□□□ -1.27
CTCFL-203ENST00000422109 KIAA1109Q2LD37 5005 aa7.11□□□□□ -1.27
CTCFL-203ENST00000422109 A0A0D9SG42 100 aa7.09□□□□□ -1.27
CTCFL-203ENST00000422109 RPL37P61927 97 aaKnown RBP7.09□□□□□ -1.27
CTCFL-203ENST00000422109 KRTAP3-3Q9BYR6 98 aa7.04□□□□□ -1.28
CTCFL-203ENST00000422109 LPAP08519 4548 aa7.03□□□□□ -1.28
CTCFL-203ENST00000422109 RYR1P21817 5038 aa7.02□□□□□ -1.29
CTCFL-203ENST00000422109 S4R3F8 94 aa7.02□□□□□ -1.29
CTCFL-203ENST00000422109 P0C880 135 aa6.99□□□□□ -1.29
CTCFL-203ENST00000422109 KRTAP13-4Q3LI77 160 aa6.99□□□□□ -1.29
CTCFL-203ENST00000422109 K7ERS5 55 aa6.98□□□□□ -1.29
CTCFL-203ENST00000422109 KRTAP10-6P60371 365 aaPredicted RBP6.98□□□□□ -1.29
CTCFL-203ENST00000422109 MT1HL1P0DM35 61 aa6.97□□□□□ -1.29
CTCFL-203ENST00000422109 LRP2P98164 4655 aa6.97□□□□□ -1.29
CTCFL-203ENST00000422109 KRTAP3-2Q9BYR7 98 aa6.92□□□□□ -1.3
CTCFL-203ENST00000422109 EPPK1P58107 5090 aaKnown RBP6.9□□□□□ -1.31
CTCFL-203ENST00000422109 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
CTCFL-203ENST00000422109 NDUFAF8A1L188 74 aa6.86□□□□□ -1.31
CTCFL-203ENST00000422109 ABCA13Q86UQ4 5058 aa6.85□□□□□ -1.31
CTCFL-203ENST00000422109 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
CTCFL-203ENST00000422109 SPINT4Q6UDR6 99 aa6.82□□□□□ -1.32
CTCFL-203ENST00000422109 C10orf95Q9H7T3 257 aa6.77□□□□□ -1.33
CTCFL-203ENST00000422109 KRTAP12-2P59991 146 aa6.76□□□□□ -1.33
CTCFL-203ENST00000422109 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
CTCFL-203ENST00000422109 KRTAP12-1P59990 96 aa6.66□□□□□ -1.34
CTCFL-203ENST00000422109 M0QZ58 72 aa6.63□□□□□ -1.35
CTCFL-203ENST00000422109 J3QL48 77 aa6.62□□□□□ -1.35
CTCFL-203ENST00000422109 LUZP6Q538Z0 58 aa6.62□□□□□ -1.35
CTCFL-203ENST00000422109 KRTAP4-1Q9BYQ7 146 aa6.58□□□□□ -1.36
CTCFL-203ENST00000422109 R4GN34 69 aa6.57□□□□□ -1.36
CTCFL-203ENST00000422109 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
CTCFL-203ENST00000422109 SEC61BP60468 96 aaKnown RBP6.54□□□□□ -1.36
CTCFL-203ENST00000422109 MUC2Q02817 5179 aa6.54□□□□□ -1.36
CTCFL-203ENST00000422109 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
CTCFL-203ENST00000422109 HERC2O95714 4834 aa6.5□□□□□ -1.37
CTCFL-203ENST00000422109 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
CTCFL-203ENST00000422109 KRTAP15-1Q3LI76 137 aa6.43□□□□□ -1.38
CTCFL-203ENST00000422109 KRTAP19-2Q3LHN2 52 aa6.29□□□□□ -1.4
CTCFL-203ENST00000422109 CAMK2N1Q7Z7J9 78 aa6.28□□□□□ -1.4
CTCFL-203ENST00000422109 HERC1Q15751 4861 aa6.28□□□□□ -1.4
CTCFL-203ENST00000422109 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
CTCFL-203ENST00000422109 PCLOQ9Y6V0 5065 aa6.18□□□□□ -1.42
CTCFL-203ENST00000422109 BIRC6Q9NR09 4857 aa6.15□□□□□ -1.42
CTCFL-203ENST00000422109 FLGP20930 4061 aaPredicted RBP6.13□□□□□ -1.43
CTCFL-203ENST00000422109 RNF213Q63HN8 5207 aa6.08□□□□□ -1.44
CTCFL-203ENST00000422109 M0R2T5 61 aa6.07□□□□□ -1.44
CTCFL-203ENST00000422109 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
CTCFL-203ENST00000422109 HMCN2Q8NDA2 5059 aa6.05□□□□□ -1.44
CTCFL-203ENST00000422109 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
CTCFL-203ENST00000422109 UBR4Q5T4S7 5183 aa5.97□□□□□ -1.45
CTCFL-203ENST00000422109 TNP1P09430 55 aa5.94□□□□□ -1.46
CTCFL-203ENST00000422109 PP632Q6XCG6 107 aa5.9□□□□□ -1.47
CTCFL-203ENST00000422109 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
CTCFL-203ENST00000422109 MT1HP80294 61 aa5.85□□□□□ -1.47
CTCFL-203ENST00000422109 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
CTCFL-203ENST00000422109 MT1FP04733 61 aa5.79□□□□□ -1.48
CTCFL-203ENST00000422109 SPRR2GQ9BYE4 73 aa5.78□□□□□ -1.48
CTCFL-203ENST00000422109 MT2AP02795 61 aa5.76□□□□□ -1.49
CTCFL-203ENST00000422109 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
CTCFL-203ENST00000422109 KRTAP9-8Q9BYQ0 159 aa5.68□□□□□ -1.5
CTCFL-203ENST00000422109 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
CTCFL-203ENST00000422109 MT1BP07438 61 aa5.54□□□□□ -1.52
CTCFL-203ENST00000422109 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
CTCFL-203ENST00000422109 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
CTCFL-203ENST00000422109 MT1XP80297 61 aa5.5□□□□□ -1.53
CTCFL-203ENST00000422109 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
CTCFL-203ENST00000422109 SPRR5A0A1B0GTR4 108 aa5.49□□□□□ -1.53
CTCFL-203ENST00000422109 USH2AO75445 5202 aa5.46□□□□□ -1.54
CTCFL-203ENST00000422109 LCE2BO14633 110 aa5.44□□□□□ -1.54
CTCFL-203ENST00000422109 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
CTCFL-203ENST00000422109 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
CTCFL-203ENST00000422109 KRTAP9-3Q9BYQ3 159 aa5.43□□□□□ -1.54
CTCFL-203ENST00000422109 KRTAP8-1Q8IUC2 63 aa5.37□□□□□ -1.55
CTCFL-203ENST00000422109 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
CTCFL-203ENST00000422109 KMT2DO14686 5537 aa5.36□□□□□ -1.55
CTCFL-203ENST00000422109 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
CTCFL-203ENST00000422109 KRTAP4-8A0A0G2JLE6 195 aa5.19□□□□□ -1.58
CTCFL-203ENST00000422109 KRTAP4-8Q9BYQ9 185 aa5.19□□□□□ -1.58
CTCFL-203ENST00000422109 INE1O15225 51 aa5.14□□□□□ -1.59
CTCFL-203ENST00000422109 LCE2AQ5TA79 106 aaPredicted RBP5.1□□□□□ -1.59
CTCFL-203ENST00000422109 FSIP2Q5CZC0 6907 aa5.09□□□□□ -1.59
CTCFL-203ENST00000422109 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
CTCFL-203ENST00000422109 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
CTCFL-203ENST00000422109 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.62
CTCFL-203ENST00000422109 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
CTCFL-203ENST00000422109 SSPOA2VEC9 5147 aa4.87□□□□□ -1.63
CTCFL-203ENST00000422109 MT1EP04732 61 aa4.75□□□□□ -1.65
CTCFL-203ENST00000422109 MT1LQ93083 61 aa4.75□□□□□ -1.65
CTCFL-203ENST00000422109 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
CTCFL-203ENST00000422109 MUC12Q9UKN1 5478 aa4.7□□□□□ -1.66
CTCFL-203ENST00000422109 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms