RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 DMBT1Q9UGM3 2413 aaPredicted RBP11.1□□□□□ -0.63
USP48-205ENST00000421625 KRTAP10-4P60372 401 aaPredicted RBP11.04□□□□□ -0.64
USP48-205ENST00000421625 KRTAP10-6P60371 365 aaPredicted RBP11.03□□□□□ -0.64
USP48-205ENST00000421625 KRTAP13-4Q3LI77 160 aa11.03□□□□□ -0.64
USP48-205ENST00000421625 A0A0D9SG42 100 aa11□□□□□ -0.65
USP48-205ENST00000421625 RPL37P61927 97 aaKnown RBP10.99□□□□□ -0.65
USP48-205ENST00000421625 KRTAP3-3Q9BYR6 98 aa10.99□□□□□ -0.65
USP48-205ENST00000421625 LRP1Q07954 4544 aaKnown RBP10.94□□□□□ -0.66
USP48-205ENST00000421625 KRTAP3-2Q9BYR7 98 aa10.92□□□□□ -0.66
USP48-205ENST00000421625 HSPG2P98160 4391 aa10.91□□□□□ -0.66
USP48-205ENST00000421625 TPRXLQ17RH7 258 aa10.9□□□□□ -0.66
USP48-205ENST00000421625 SPINT4Q6UDR6 99 aa10.87□□□□□ -0.67
USP48-205ENST00000421625 FAT3Q8TDW7 4589 aa10.87□□□□□ -0.67
USP48-205ENST00000421625 KIAA1109Q2LD37 5005 aa10.87□□□□□ -0.67
USP48-205ENST00000421625 NDUFAF8A1L188 74 aa10.82□□□□□ -0.68
USP48-205ENST00000421625 KRTAP10-8P60410 259 aa10.82□□□□□ -0.68
USP48-205ENST00000421625 C10orf95Q9H7T3 257 aa10.82□□□□□ -0.68
USP48-205ENST00000421625 Q5VSD8 79 aa10.81□□□□□ -0.68
USP48-205ENST00000421625 KRTAP17-1Q9BYP8 105 aa10.81□□□□□ -0.68
USP48-205ENST00000421625 RYR1P21817 5038 aa10.8□□□□□ -0.68
USP48-205ENST00000421625 S4R3F8 94 aa10.79□□□□□ -0.68
USP48-205ENST00000421625 EPPK1P58107 5090 aaKnown RBP10.78□□□□□ -0.68
USP48-205ENST00000421625 MYCBP2O75592 4640 aa10.75□□□□□ -0.69
USP48-205ENST00000421625 TNXBP22105 4242 aa10.72□□□□□ -0.69
USP48-205ENST00000421625 KRTAP12-2P59991 146 aa10.69□□□□□ -0.7
USP48-205ENST00000421625 XP32Q5T750 250 aa10.64□□□□□ -0.71
USP48-205ENST00000421625 KRTAP12-1P59990 96 aa10.55□□□□□ -0.72
USP48-205ENST00000421625 KRTAP15-1Q3LI76 137 aa10.55□□□□□ -0.72
USP48-205ENST00000421625 LPAP08519 4548 aa10.45□□□□□ -0.74
USP48-205ENST00000421625 A0A0A0MQY5 61 aa10.42□□□□□ -0.74
USP48-205ENST00000421625 MT1HL1P0DM35 61 aa10.42□□□□□ -0.74
USP48-205ENST00000421625 KRTAP4-5Q9BYR2 181 aa10.41□□□□□ -0.74
USP48-205ENST00000421625 M0QZ58 72 aa10.3□□□□□ -0.76
USP48-205ENST00000421625 ABCA13Q86UQ4 5058 aa10.3□□□□□ -0.76
USP48-205ENST00000421625 LRP2P98164 4655 aa10.26□□□□□ -0.77
USP48-205ENST00000421625 HERC2O95714 4834 aa10.13□□□□□ -0.79
USP48-205ENST00000421625 R4GN34 69 aa10.04□□□□□ -0.8
USP48-205ENST00000421625 BIRC6Q9NR09 4857 aa9.98□□□□□ -0.81
USP48-205ENST00000421625 LUZP6Q538Z0 58 aa9.97□□□□□ -0.81
USP48-205ENST00000421625 J3QL48 77 aa9.97□□□□□ -0.81
USP48-205ENST00000421625 LORP23490 312 aaPredicted RBP9.95□□□□□ -0.82
USP48-205ENST00000421625 PLAC4Q8WY50 150 aa9.89□□□□□ -0.83
USP48-205ENST00000421625 PCLOQ9Y6V0 5065 aa9.8□□□□□ -0.84
USP48-205ENST00000421625 MUC17Q685J3 4493 aa9.78□□□□□ -0.84
USP48-205ENST00000421625 HERC1Q15751 4861 aa9.77□□□□□ -0.85
USP48-205ENST00000421625 MUC2Q02817 5179 aa9.7□□□□□ -0.86
USP48-205ENST00000421625 KRTAP4-1Q9BYQ7 146 aa9.65□□□□□ -0.86
USP48-205ENST00000421625 SEC61BP60468 96 aaKnown RBP9.61□□□□□ -0.87
USP48-205ENST00000421625 CAMK2N1Q7Z7J9 78 aa9.59□□□□□ -0.87
USP48-205ENST00000421625 PP632Q6XCG6 107 aa9.55□□□□□ -0.88
USP48-205ENST00000421625 KRTAP19-2Q3LHN2 52 aa9.48□□□□□ -0.89
USP48-205ENST00000421625 HMCN2Q8NDA2 5059 aa9.47□□□□□ -0.89
USP48-205ENST00000421625 RNF213Q63HN8 5207 aa9.27□□□□□ -0.93
USP48-205ENST00000421625 UBR4Q5T4S7 5183 aa9.25□□□□□ -0.93
USP48-205ENST00000421625 TNP1P09430 55 aa9.24□□□□□ -0.93
USP48-205ENST00000421625 FLGP20930 4061 aaPredicted RBP9.23□□□□□ -0.93
USP48-205ENST00000421625 FAT4Q6V0I7 4981 aa9.23□□□□□ -0.93
USP48-205ENST00000421625 SPRR5A0A1B0GTR4 108 aa9.12□□□□□ -0.95
USP48-205ENST00000421625 KRTAP23-1A1A580 65 aa9.1□□□□□ -0.95
USP48-205ENST00000421625 LCE2CQ5TA81 110 aa8.95□□□□□ -0.98
USP48-205ENST00000421625 M0R2T5 61 aa8.83□□□□□ -1
USP48-205ENST00000421625 SPRR2GQ9BYE4 73 aa8.8□□□□□ -1
USP48-205ENST00000421625 KRTAP19-1Q8IUB9 90 aa8.8□□□□□ -1
USP48-205ENST00000421625 LCE3AQ5TA76 89 aa8.79□□□□□ -1
USP48-205ENST00000421625 MT1HP80294 61 aa8.75□□□□□ -1.01
USP48-205ENST00000421625 PRO2289Q9P1D8 64 aa8.56□□□□□ -1.04
USP48-205ENST00000421625 KRTAP10-10P60014 251 aa8.52□□□□□ -1.05
USP48-205ENST00000421625 MT1FP04733 61 aa8.51□□□□□ -1.05
USP48-205ENST00000421625 MT2AP02795 61 aa8.5□□□□□ -1.05
USP48-205ENST00000421625 KRTAP8-1Q8IUC2 63 aa8.48□□□□□ -1.05
USP48-205ENST00000421625 KRTAP9-8Q9BYQ0 159 aa8.48□□□□□ -1.05
USP48-205ENST00000421625 KRTAP10-5P60370 271 aa8.35□□□□□ -1.07
USP48-205ENST00000421625 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
USP48-205ENST00000421625 MT1XP80297 61 aa8.32□□□□□ -1.08
USP48-205ENST00000421625 KRTAP12-3P60328 96 aa8.31□□□□□ -1.08
USP48-205ENST00000421625 MT1BP07438 61 aa8.28□□□□□ -1.08
USP48-205ENST00000421625 INE1O15225 51 aa8.28□□□□□ -1.08
USP48-205ENST00000421625 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
USP48-205ENST00000421625 KRTAP10-7P60409 375 aaPredicted RBP8.17□□□□□ -1.1
USP48-205ENST00000421625 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
USP48-205ENST00000421625 USH2AO75445 5202 aa8.08□□□□□ -1.12
USP48-205ENST00000421625 LCE2AQ5TA79 106 aaPredicted RBP8.06□□□□□ -1.12
USP48-205ENST00000421625 LCE2BO14633 110 aa7.93□□□□□ -1.14
USP48-205ENST00000421625 KRTAP19-5Q3LI72 72 aa7.87□□□□□ -1.15
USP48-205ENST00000421625 LCE3CQ5T5A8 94 aa7.84□□□□□ -1.15
USP48-205ENST00000421625 KMT2DO14686 5537 aa7.77□□□□□ -1.17
USP48-205ENST00000421625 FSIP2Q5CZC0 6907 aa7.75□□□□□ -1.17
USP48-205ENST00000421625 KRTAP9-6A8MVA2 160 aa7.68□□□□□ -1.18
USP48-205ENST00000421625 KRTAP4-8A0A0G2JLE6 195 aa7.61□□□□□ -1.19
USP48-205ENST00000421625 KRTAP4-8Q9BYQ9 185 aa7.61□□□□□ -1.19
USP48-205ENST00000421625 SSPOA2VEC9 5147 aa7.51□□□□□ -1.21
USP48-205ENST00000421625 KRTAP4-7Q9BYR0 210 aa7.49□□□□□ -1.21
USP48-205ENST00000421625 KRTAP2-3P0C7H8 128 aa7.46□□□□□ -1.22
USP48-205ENST00000421625 KRTAP2-4Q9BYR9 128 aa7.46□□□□□ -1.22
USP48-205ENST00000421625 KRTAP2-1Q9BYU5 128 aa7.46□□□□□ -1.22
USP48-205ENST00000421625 KRTAP19-7Q3SYF9 63 aa7.41□□□□□ -1.22
USP48-205ENST00000421625 MT1LQ93083 61 aa7.22□□□□□ -1.25
USP48-205ENST00000421625 KRTAP19-6Q3LI70 58 aa7.16□□□□□ -1.26
USP48-205ENST00000421625 MT1EP04732 61 aa7.15□□□□□ -1.26
USP48-205ENST00000421625 FCGBPQ9Y6R7 5405 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms