RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 P0C880 135 aa6.94□□□□□ -1.3
TNFRSF8-203ENST00000417814 Q5VSD8 79 aa6.94□□□□□ -1.3
TNFRSF8-203ENST00000417814 J3QL48 77 aa6.93□□□□□ -1.3
TNFRSF8-203ENST00000417814 KRTAP10-8P60410 259 aa6.9□□□□□ -1.3
TNFRSF8-203ENST00000417814 C20orf166-AS1Q96NR2 134 aa6.9□□□□□ -1.3
TNFRSF8-203ENST00000417814 KIAA1109Q2LD37 5005 aa6.88□□□□□ -1.31
TNFRSF8-203ENST00000417814 NDUFAF8A1L188 74 aa6.87□□□□□ -1.31
TNFRSF8-203ENST00000417814 S4R3F8 94 aa6.84□□□□□ -1.31
TNFRSF8-203ENST00000417814 KRTAP13-4Q3LI77 160 aa6.82□□□□□ -1.32
TNFRSF8-203ENST00000417814 HSPG2P98160 4391 aa6.82□□□□□ -1.32
TNFRSF8-203ENST00000417814 RPL37P61927 97 aaKnown RBP6.8□□□□□ -1.32
TNFRSF8-203ENST00000417814 RYR1P21817 5038 aa6.79□□□□□ -1.32
TNFRSF8-203ENST00000417814 XP32Q5T750 250 aa6.76□□□□□ -1.33
TNFRSF8-203ENST00000417814 LRP2P98164 4655 aa6.76□□□□□ -1.33
TNFRSF8-203ENST00000417814 A0A1B0GVY2 172 aa6.74□□□□□ -1.33
TNFRSF8-203ENST00000417814 LPAP08519 4548 aa6.72□□□□□ -1.33
TNFRSF8-203ENST00000417814 KRTAP10-4P60372 401 aaPredicted RBP6.72□□□□□ -1.33
TNFRSF8-203ENST00000417814 RYR3Q15413 4870 aa6.72□□□□□ -1.33
TNFRSF8-203ENST00000417814 KRTAP21-3Q3LHN1 58 aa6.72□□□□□ -1.33
TNFRSF8-203ENST00000417814 RPS29P62273 56 aaKnown RBP6.71□□□□□ -1.33
TNFRSF8-203ENST00000417814 TPRXLQ17RH7 258 aa6.69□□□□□ -1.34
TNFRSF8-203ENST00000417814 KRTAP10-6P60371 365 aaPredicted RBP6.67□□□□□ -1.34
TNFRSF8-203ENST00000417814 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.34
TNFRSF8-203ENST00000417814 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
TNFRSF8-203ENST00000417814 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
TNFRSF8-203ENST00000417814 M0QZ58 72 aa6.63□□□□□ -1.35
TNFRSF8-203ENST00000417814 PKHD1L1Q86WI1 4243 aa6.61□□□□□ -1.35
TNFRSF8-203ENST00000417814 RYR2Q92736 4967 aa6.6□□□□□ -1.35
TNFRSF8-203ENST00000417814 R4GN34 69 aa6.58□□□□□ -1.36
TNFRSF8-203ENST00000417814 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
TNFRSF8-203ENST00000417814 EPPK1P58107 5090 aaKnown RBP6.56□□□□□ -1.36
TNFRSF8-203ENST00000417814 MUC2Q02817 5179 aa6.53□□□□□ -1.36
TNFRSF8-203ENST00000417814 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
TNFRSF8-203ENST00000417814 KRTAP4-5Q9BYR2 181 aa6.52□□□□□ -1.37
TNFRSF8-203ENST00000417814 ABCA13Q86UQ4 5058 aa6.49□□□□□ -1.37
TNFRSF8-203ENST00000417814 KRTAP12-1P59990 96 aa6.44□□□□□ -1.38
TNFRSF8-203ENST00000417814 MT1HL1P0DM35 61 aa6.43□□□□□ -1.38
TNFRSF8-203ENST00000417814 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
TNFRSF8-203ENST00000417814 LUZP6Q538Z0 58 aa6.41□□□□□ -1.38
TNFRSF8-203ENST00000417814 TNXBP22105 4242 aa6.39□□□□□ -1.39
TNFRSF8-203ENST00000417814 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
TNFRSF8-203ENST00000417814 SEC61BP60468 96 aaKnown RBP6.24□□□□□ -1.41
TNFRSF8-203ENST00000417814 PLAC4Q8WY50 150 aa6.21□□□□□ -1.42
TNFRSF8-203ENST00000417814 HERC2O95714 4834 aa6.2□□□□□ -1.42
TNFRSF8-203ENST00000417814 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
TNFRSF8-203ENST00000417814 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
TNFRSF8-203ENST00000417814 M0R2T5 61 aa6.19□□□□□ -1.42
TNFRSF8-203ENST00000417814 RNF213Q63HN8 5207 aa6.16□□□□□ -1.42
TNFRSF8-203ENST00000417814 HERC1Q15751 4861 aa6.11□□□□□ -1.43
TNFRSF8-203ENST00000417814 UBR4Q5T4S7 5183 aa5.89□□□□□ -1.47
TNFRSF8-203ENST00000417814 TNP1P09430 55 aa5.86□□□□□ -1.47
TNFRSF8-203ENST00000417814 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
TNFRSF8-203ENST00000417814 HMCN2Q8NDA2 5059 aa5.83□□□□□ -1.48
TNFRSF8-203ENST00000417814 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
TNFRSF8-203ENST00000417814 KRTAP10-10P60014 251 aa5.8□□□□□ -1.48
TNFRSF8-203ENST00000417814 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
TNFRSF8-203ENST00000417814 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
TNFRSF8-203ENST00000417814 KRTAP19-2Q3LHN2 52 aa5.61□□□□□ -1.51
TNFRSF8-203ENST00000417814 FLGP20930 4061 aaPredicted RBP5.61□□□□□ -1.51
TNFRSF8-203ENST00000417814 USH2AO75445 5202 aa5.6□□□□□ -1.51
TNFRSF8-203ENST00000417814 LCE3AQ5TA76 89 aa5.56□□□□□ -1.52
TNFRSF8-203ENST00000417814 BIRC6Q9NR09 4857 aa5.53□□□□□ -1.52
TNFRSF8-203ENST00000417814 KMT2DO14686 5537 aa5.5□□□□□ -1.53
TNFRSF8-203ENST00000417814 MT1FP04733 61 aa5.46□□□□□ -1.54
TNFRSF8-203ENST00000417814 KRTAP19-1Q8IUB9 90 aa5.45□□□□□ -1.54
TNFRSF8-203ENST00000417814 PRO2289Q9P1D8 64 aa5.44□□□□□ -1.54
TNFRSF8-203ENST00000417814 MT1HP80294 61 aa5.42□□□□□ -1.54
TNFRSF8-203ENST00000417814 LCE2CQ5TA81 110 aa5.42□□□□□ -1.54
TNFRSF8-203ENST00000417814 MT2AP02795 61 aa5.39□□□□□ -1.55
TNFRSF8-203ENST00000417814 SPRR5A0A1B0GTR4 108 aa5.35□□□□□ -1.55
TNFRSF8-203ENST00000417814 SPRR2GQ9BYE4 73 aa5.29□□□□□ -1.56
TNFRSF8-203ENST00000417814 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
TNFRSF8-203ENST00000417814 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
TNFRSF8-203ENST00000417814 INE1O15225 51 aa5.24□□□□□ -1.57
TNFRSF8-203ENST00000417814 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
TNFRSF8-203ENST00000417814 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
TNFRSF8-203ENST00000417814 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
TNFRSF8-203ENST00000417814 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
TNFRSF8-203ENST00000417814 MT1XP80297 61 aa5.14□□□□□ -1.59
TNFRSF8-203ENST00000417814 DSTQ03001 7570 aaKnown RBP5.14□□□□□ -1.59
TNFRSF8-203ENST00000417814 MT1BP07438 61 aa5.14□□□□□ -1.59
TNFRSF8-203ENST00000417814 KRTAP10-5P60370 271 aa5.14□□□□□ -1.59
TNFRSF8-203ENST00000417814 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
TNFRSF8-203ENST00000417814 KRTAP4-8Q9BYQ9 185 aa5.11□□□□□ -1.59
TNFRSF8-203ENST00000417814 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
TNFRSF8-203ENST00000417814 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
TNFRSF8-203ENST00000417814 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
TNFRSF8-203ENST00000417814 FCGBPQ9Y6R7 5405 aaPredicted RBP5.01□□□□□ -1.61
TNFRSF8-203ENST00000417814 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
TNFRSF8-203ENST00000417814 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
TNFRSF8-203ENST00000417814 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
TNFRSF8-203ENST00000417814 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
TNFRSF8-203ENST00000417814 LCE2BO14633 110 aa4.93□□□□□ -1.62
TNFRSF8-203ENST00000417814 MUC12Q9UKN1 5478 aa4.85□□□□□ -1.63
TNFRSF8-203ENST00000417814 LCE2DQ5TA82 110 aaPredicted RBP4.81□□□□□ -1.64
TNFRSF8-203ENST00000417814 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
TNFRSF8-203ENST00000417814 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
TNFRSF8-203ENST00000417814 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
TNFRSF8-203ENST00000417814 SSPOA2VEC9 5147 aa4.68□□□□□ -1.66
TNFRSF8-203ENST00000417814 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms