RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 A0A1W2PNM2 257 aa3.23□□□□□ -1.89
EPHA4-204ENST00000415749 DSCR8Q96T75 97 aa3.23□□□□□ -1.89
EPHA4-204ENST00000415749 UBL5Q9BZL1 73 aa3.23□□□□□ -1.89
EPHA4-204ENST00000415749 PRR15Q8IV56 129 aa3.22□□□□□ -1.89
EPHA4-204ENST00000415749 Q9BRP9 147 aa3.22□□□□□ -1.89
EPHA4-204ENST00000415749 RPS28P62857 69 aaKnown RBP3.21□□□□□ -1.9
EPHA4-204ENST00000415749 KRTAP13-3Q3SY46 172 aa3.21□□□□□ -1.9
EPHA4-204ENST00000415749 Q6ZRX8 168 aa3.21□□□□□ -1.9
EPHA4-204ENST00000415749 PHF5AQ7RTV0 110 aaKnown RBP3.2□□□□□ -1.9
EPHA4-204ENST00000415749 LOC107984640A0A0U1RRK4 108 aa3.19□□□□□ -1.9
EPHA4-204ENST00000415749 TMEM258P61165 79 aa3.19□□□□□ -1.9
EPHA4-204ENST00000415749 IGFL1Q6UW32 110 aa3.19□□□□□ -1.9
EPHA4-204ENST00000415749 ERC2-IT1O76042 136 aa3.18□□□□□ -1.9
EPHA4-204ENST00000415749 IGKV4-1P06312 121 aa3.18□□□□□ -1.9
EPHA4-204ENST00000415749 TPRXLQ17RH7 258 aa3.18□□□□□ -1.9
EPHA4-204ENST00000415749 SPRR4Q96PI1 79 aa3.18□□□□□ -1.9
EPHA4-204ENST00000415749 RETNLBQ9BQ08 111 aa3.18□□□□□ -1.9
EPHA4-204ENST00000415749 KLKP1Q107X0 134 aa3.17□□□□□ -1.9
EPHA4-204ENST00000415749 H7BZZ5 65 aa3.16□□□□□ -1.9
EPHA4-204ENST00000415749 KRTAP4-1Q9BYQ7 146 aa3.16□□□□□ -1.9
EPHA4-204ENST00000415749 ETDCA0A1B0GVM5 59 aa3.15□□□□□ -1.91
EPHA4-204ENST00000415749 SPRR1BP22528 89 aa3.15□□□□□ -1.91
EPHA4-204ENST00000415749 ASB16-AS1Q495Z4 193 aa3.15□□□□□ -1.91
EPHA4-204ENST00000415749 NREPQ16612 68 aa3.14□□□□□ -1.91
EPHA4-204ENST00000415749 C20orf197Q8N268 126 aa3.14□□□□□ -1.91
EPHA4-204ENST00000415749 DEFB105AQ8NG35 78 aa3.14□□□□□ -1.91
EPHA4-204ENST00000415749 KRTAP13-1Q8IUC0 172 aa3.12□□□□□ -1.91
EPHA4-204ENST00000415749 NDUFC1O43677 76 aa3.11□□□□□ -1.91
EPHA4-204ENST00000415749 MT1HP80294 61 aa3.11□□□□□ -1.91
EPHA4-204ENST00000415749 Q5XG85 94 aa3.11□□□□□ -1.91
EPHA4-204ENST00000415749 LINC00304Q8N9R0 145 aa3.11□□□□□ -1.91
EPHA4-204ENST00000415749 PRLHP81277 87 aa3.1□□□□□ -1.91
EPHA4-204ENST00000415749 TMEM254Q8TBM7 123 aa3.1□□□□□ -1.91
EPHA4-204ENST00000415749 ZCCHC13Q8WW36 166 aaKnown RBP3.1□□□□□ -1.91
EPHA4-204ENST00000415749 SNURFQ9Y675 71 aa3.1□□□□□ -1.91
EPHA4-204ENST00000415749 A0A0G2JQZ4 141 aa3.09□□□□□ -1.91
EPHA4-204ENST00000415749 F8WEM9 126 aa3.09□□□□□ -1.91
EPHA4-204ENST00000415749 ATP5EP56381 51 aaPredicted RBP3.09□□□□□ -1.91
EPHA4-204ENST00000415749 BRK1Q8WUW1 75 aa3.09□□□□□ -1.91
EPHA4-204ENST00000415749 C20orf166-AS1Q96NR2 134 aa3.09□□□□□ -1.91
EPHA4-204ENST00000415749 SERP1Q9Y6X1 66 aa3.09□□□□□ -1.91
EPHA4-204ENST00000415749 K7EQZ3 153 aa3.08□□□□□ -1.92
EPHA4-204ENST00000415749 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
EPHA4-204ENST00000415749 KRTAP19-2Q3LHN2 52 aa3.07□□□□□ -1.92
EPHA4-204ENST00000415749 FP248Q71RG6 208 aaPredicted RBP3.07□□□□□ -1.92
EPHA4-204ENST00000415749 LINC00472Q9H8W2 130 aa3.07□□□□□ -1.92
EPHA4-204ENST00000415749 PRO2289Q9P1D8 64 aa3.07□□□□□ -1.92
EPHA4-204ENST00000415749 HCG22E2RYF7 251 aa3.06□□□□□ -1.92
EPHA4-204ENST00000415749 A0A087WSZ3 146 aa3.05□□□□□ -1.92
EPHA4-204ENST00000415749 M0R2T5 61 aa3.05□□□□□ -1.92
EPHA4-204ENST00000415749 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
EPHA4-204ENST00000415749 C7orf65Q6ZTY9 151 aa3.05□□□□□ -1.92
EPHA4-204ENST00000415749 Q96NJ1 140 aa3.05□□□□□ -1.92
EPHA4-204ENST00000415749 SPAG11AQ6PDA7 123 aa3.04□□□□□ -1.92
EPHA4-204ENST00000415749 MMP24-AS1A0A0U1RRL7 71 aa3.02□□□□□ -1.93
EPHA4-204ENST00000415749 P0C880 135 aa3.02□□□□□ -1.93
EPHA4-204ENST00000415749 CYP4F30PQ9H0H9 118 aa3.02□□□□□ -1.93
EPHA4-204ENST00000415749 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
EPHA4-204ENST00000415749 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
EPHA4-204ENST00000415749 hDV103S1A0JD37 113 aa3.01□□□□□ -1.93
EPHA4-204ENST00000415749 WFDC13Q8IUB5 93 aa3.01□□□□□ -1.93
EPHA4-204ENST00000415749 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
EPHA4-204ENST00000415749 USH2AO75445 5202 aa3□□□□□ -1.93
EPHA4-204ENST00000415749 TRAV22A0A0B4J277 110 aa3□□□□□ -1.93
EPHA4-204ENST00000415749 CASC2Q6XLA1 102 aa3□□□□□ -1.93
EPHA4-204ENST00000415749 PCOTHQ58A44 107 aa2.98□□□□□ -1.93
EPHA4-204ENST00000415749 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
EPHA4-204ENST00000415749 H0Y9P7 68 aa2.97□□□□□ -1.93
EPHA4-204ENST00000415749 NDUFB1O75438 58 aa2.97□□□□□ -1.93
EPHA4-204ENST00000415749 ROMO1P60602 79 aa2.97□□□□□ -1.93
EPHA4-204ENST00000415749 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.93
EPHA4-204ENST00000415749 SPINK1P00995 79 aa2.96□□□□□ -1.94
EPHA4-204ENST00000415749 Q1T7F1 81 aa2.96□□□□□ -1.94
EPHA4-204ENST00000415749 COX6B2Q6YFQ2 88 aa2.96□□□□□ -1.94
EPHA4-204ENST00000415749 LINC00208Q96KT6 92 aa2.96□□□□□ -1.94
EPHA4-204ENST00000415749 TP53AIP1Q9HCN2 124 aa2.94□□□□□ -1.94
EPHA4-204ENST00000415749 SSBP3-AS1Q7Z2R9 100 aa2.93□□□□□ -1.94
EPHA4-204ENST00000415749 MRPL34Q9BQ48 92 aaKnown RBP2.93□□□□□ -1.94
EPHA4-204ENST00000415749 FLGP20930 4061 aaPredicted RBP2.91□□□□□ -1.94
EPHA4-204ENST00000415749 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
EPHA4-204ENST00000415749 RPS29P62273 56 aaKnown RBP2.9□□□□□ -1.95
EPHA4-204ENST00000415749 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
EPHA4-204ENST00000415749 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
EPHA4-204ENST00000415749 C9orf92A6NGG3 77 aa2.89□□□□□ -1.95
EPHA4-204ENST00000415749 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
EPHA4-204ENST00000415749 LOC101927531A0A1B0GV80 90 aa2.87□□□□□ -1.95
EPHA4-204ENST00000415749 Q5VV11 94 aa2.87□□□□□ -1.95
EPHA4-204ENST00000415749 COA5Q86WW8 74 aa2.87□□□□□ -1.95
EPHA4-204ENST00000415749 NEBP20929 6669 aa2.86□□□□□ -1.95
EPHA4-204ENST00000415749 LIMD2Q9BT23 127 aa2.85□□□□□ -1.95
EPHA4-204ENST00000415749 LINC01558Q9Y6Z2 57 aa2.85□□□□□ -1.95
EPHA4-204ENST00000415749 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.95
EPHA4-204ENST00000415749 MT2AP02795 61 aa2.82□□□□□ -1.96
EPHA4-204ENST00000415749 RPL37P61927 97 aaKnown RBP2.82□□□□□ -1.96
EPHA4-204ENST00000415749 KRTAP19-6Q3LI70 58 aa2.82□□□□□ -1.96
EPHA4-204ENST00000415749 DMAC1Q96GE9 116 aa2.82□□□□□ -1.96
EPHA4-204ENST00000415749 KRTAP10-10P60014 251 aa2.81□□□□□ -1.96
EPHA4-204ENST00000415749 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
EPHA4-204ENST00000415749 PRR15LQ9BU68 103 aa2.81□□□□□ -1.96
EPHA4-204ENST00000415749 MT1FP04733 61 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms