RNA–Protein interactions for RNA: ENST00000415489.1

PNPT1-203, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 3

Gene PNPT1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-203ENST00000415489 DMXL2Q8TDJ6 3036 aa0.78□□□□□ -2.29
PNPT1-203ENST00000415489 NSD1Q96L73 2696 aaPredicted RBP0.77□□□□□ -2.29
PNPT1-203ENST00000415489 TGP01266 2768 aa0.77□□□□□ -2.29
PNPT1-203ENST00000415489 WDFY4Q6ZS81 3184 aa0.77□□□□□ -2.29
PNPT1-203ENST00000415489 LOC400499M0QZD8 3231 aa0.77□□□□□ -2.29
PNPT1-203ENST00000415489 DCHS2Q6V1P9 2916 aa0.77□□□□□ -2.29
PNPT1-203ENST00000415489 DCHS1Q96JQ0 3298 aa0.77□□□□□ -2.29
PNPT1-203ENST00000415489 GCN1Q92616 2671 aaKnown RBP0.76□□□□□ -2.29
PNPT1-203ENST00000415489 SPTAN1Q13813 2472 aaKnown RBP0.76□□□□□ -2.29
PNPT1-203ENST00000415489 LAMA1P25391 3075 aa0.76□□□□□ -2.29
PNPT1-203ENST00000415489 MYO18BQ8IUG5 2567 aa0.76□□□□□ -2.29
PNPT1-203ENST00000415489 EP400Q96L91 3159 aa0.75□□□□□ -2.29
PNPT1-203ENST00000415489 LAMA5O15230 3695 aa0.75□□□□□ -2.29
PNPT1-203ENST00000415489 TLN2Q9Y4G6 2542 aa0.75□□□□□ -2.29
PNPT1-203ENST00000415489 KALRNO60229 2985 aa0.75□□□□□ -2.29
PNPT1-203ENST00000415489 USP9XQ93008 2570 aaPredicted RBP0.75□□□□□ -2.29
PNPT1-203ENST00000415489 SPENQ96T58 3664 aaKnown RBP0.75□□□□□ -2.29
PNPT1-203ENST00000415489 SPTBN5Q9NRC6 3674 aaKnown RBP0.75□□□□□ -2.29
PNPT1-203ENST00000415489 PCNTO95613 3336 aa0.74□□□□□ -2.29
PNPT1-203ENST00000415489 DNAH8Q96JB1 4490 aa0.74□□□□□ -2.29
PNPT1-203ENST00000415489 CENPFP49454 3210 aa0.74□□□□□ -2.29
PNPT1-203ENST00000415489 DMDP11532 3685 aa0.74□□□□□ -2.29
PNPT1-203ENST00000415489 PDZD2O15018 2839 aa0.74□□□□□ -2.29
PNPT1-203ENST00000415489 MUC3AQ02505 3323 aa0.74□□□□□ -2.29
PNPT1-203ENST00000415489 KRTAP19-3Q7Z4W3 81 aa0.74□□□□□ -2.29
PNPT1-203ENST00000415489 MYCBP2O75592 4640 aa0.74□□□□□ -2.29
PNPT1-203ENST00000415489 ZNF469Q96JG9 3925 aaPredicted RBP0.73□□□□□ -2.29
PNPT1-203ENST00000415489 DYNC2H1Q8NCM8 4307 aaKnown RBP0.73□□□□□ -2.29
PNPT1-203ENST00000415489 ANKRD11Q6UB99 2663 aaPredicted RBP0.73□□□□□ -2.29
PNPT1-203ENST00000415489 ACACBO00763 2458 aa0.73□□□□□ -2.29
PNPT1-203ENST00000415489 USP34Q70CQ2 3546 aa0.73□□□□□ -2.29
PNPT1-203ENST00000415489 SACSQ9NZJ4 4579 aa0.73□□□□□ -2.29
PNPT1-203ENST00000415489 ITPR2Q14571 2701 aa0.73□□□□□ -2.29
PNPT1-203ENST00000415489 LAMA3Q16787 3333 aa0.73□□□□□ -2.29
PNPT1-203ENST00000415489 TEP1Q99973 2627 aaKnown RBP0.73□□□□□ -2.29
PNPT1-203ENST00000415489 UNC79Q9P2D8 2635 aa0.73□□□□□ -2.29
PNPT1-203ENST00000415489 ZFYVE26Q68DK2 2539 aa0.73□□□□□ -2.29
PNPT1-203ENST00000415489 TEX15Q9BXT5 2789 aa0.73□□□□□ -2.29
PNPT1-203ENST00000415489 SMG1Q96Q15 3661 aaKnown RBP0.73□□□□□ -2.29
PNPT1-203ENST00000415489 CSMD1Q96PZ7 3565 aa0.72□□□□□ -2.29
PNPT1-203ENST00000415489 STAB1Q9NY15 2570 aa0.72□□□□□ -2.29
PNPT1-203ENST00000415489 PKD1L1Q8TDX9 2849 aa0.72□□□□□ -2.29
PNPT1-203ENST00000415489 NBEAL2Q6ZNJ1 2754 aa0.72□□□□□ -2.29
PNPT1-203ENST00000415489 BSNQ9UPA5 3926 aa0.72□□□□□ -2.29
PNPT1-203ENST00000415489 DEFB4AO15263 64 aa0.72□□□□□ -2.29
PNPT1-203ENST00000415489 KMT2AQ03164 3969 aa0.72□□□□□ -2.29
PNPT1-203ENST00000415489 FASNP49327 2511 aaKnown RBP0.72□□□□□ -2.29
PNPT1-203ENST00000415489 NBEAL1Q6ZS30 2694 aa0.71□□□□□ -2.29
PNPT1-203ENST00000415489 CEP295Q9C0D2 2601 aa0.71□□□□□ -2.3
PNPT1-203ENST00000415489 CMYA5Q8N3K9 4069 aa0.71□□□□□ -2.3
PNPT1-203ENST00000415489 VPS13BQ7Z7G8 4022 aa0.71□□□□□ -2.3
PNPT1-203ENST00000415489 ASPMQ8IZT6 3477 aa0.71□□□□□ -2.3
PNPT1-203ENST00000415489 DNAH3Q8TD57 4116 aa0.71□□□□□ -2.3
PNPT1-203ENST00000415489 TACC2O95359 2948 aa0.71□□□□□ -2.3
PNPT1-203ENST00000415489 HIVEP1P15822 2718 aa0.71□□□□□ -2.3
PNPT1-203ENST00000415489 LAMA2P24043 3122 aaKnown RBP0.71□□□□□ -2.3
PNPT1-203ENST00000415489 ZANQ9Y493 2812 aa0.7□□□□□ -2.3
PNPT1-203ENST00000415489 DNAH10Q8IVF4 4471 aa0.7□□□□□ -2.3
PNPT1-203ENST00000415489 FRAS1Q86XX4 4008 aa0.7□□□□□ -2.3
PNPT1-203ENST00000415489 MYO9AB2RTY4 2548 aa0.7□□□□□ -2.3
PNPT1-203ENST00000415489 HRNRQ86YZ3 2850 aaPredicted RBP0.7□□□□□ -2.3
PNPT1-203ENST00000415489 DNAH1Q9P2D7 4330 aa0.7□□□□□ -2.3
PNPT1-203ENST00000415489 FLNAP21333 2647 aaKnown RBP0.69□□□□□ -2.3
PNPT1-203ENST00000415489 HUWE1Q7Z6Z7 4374 aaKnown RBP0.69□□□□□ -2.3
PNPT1-203ENST00000415489 MXRA5Q9NR99 2828 aa0.69□□□□□ -2.3
PNPT1-203ENST00000415489 PRKDCP78527 4128 aaKnown RBP0.69□□□□□ -2.3
PNPT1-203ENST00000415489 UNC80Q8N2C7 3258 aa0.69□□□□□ -2.3
PNPT1-203ENST00000415489 STAB2Q8WWQ8 2551 aa0.69□□□□□ -2.3
PNPT1-203ENST00000415489 PKHD1L1Q86WI1 4243 aa0.69□□□□□ -2.3
PNPT1-203ENST00000415489 ANK3Q12955 4377 aaKnown RBP0.68□□□□□ -2.3
PNPT1-203ENST00000415489 DNAH2Q9P225 4427 aa0.68□□□□□ -2.3
PNPT1-203ENST00000415489 FLNBO75369 2602 aaKnown RBP0.68□□□□□ -2.3
PNPT1-203ENST00000415489 LYSTQ99698 3801 aa0.68□□□□□ -2.3
PNPT1-203ENST00000415489 DNAH7Q8WXX0 4024 aa0.68□□□□□ -2.3
PNPT1-203ENST00000415489 TRRAPQ9Y4A5 3859 aa0.68□□□□□ -2.3
PNPT1-203ENST00000415489 FLGP20930 4061 aaPredicted RBP0.67□□□□□ -2.3
PNPT1-203ENST00000415489 VCANP13611 3396 aa0.67□□□□□ -2.3
PNPT1-203ENST00000415489 MT1AP04731 61 aa0.67□□□□□ -2.3
PNPT1-203ENST00000415489 TNXBP22105 4242 aa0.67□□□□□ -2.3
PNPT1-203ENST00000415489 MGAM2Q2M2H8 2515 aa0.67□□□□□ -2.3
PNPT1-203ENST00000415489 PKD1P98161 4303 aa0.67□□□□□ -2.3
PNPT1-203ENST00000415489 HSPG2P98160 4391 aa0.66□□□□□ -2.3
PNPT1-203ENST00000415489 ANK2Q01484 3957 aa0.66□□□□□ -2.3
PNPT1-203ENST00000415489 CSMD2Q7Z408 3487 aa0.66□□□□□ -2.3
PNPT1-203ENST00000415489 SMR3BP02814 79 aaPredicted RBP0.66□□□□□ -2.3
PNPT1-203ENST00000415489 PRM1P04553 51 aa0.66□□□□□ -2.3
PNPT1-203ENST00000415489 BRCA2P51587 3418 aa0.66□□□□□ -2.3
PNPT1-203ENST00000415489 DNAH9Q9NYC9 4486 aa0.66□□□□□ -2.3
PNPT1-203ENST00000415489 SVEP1Q4LDE5 3571 aa0.65□□□□□ -2.3
PNPT1-203ENST00000415489 CUBNO60494 3623 aa0.65□□□□□ -2.31
PNPT1-203ENST00000415489 SPRR2BP35325 72 aa0.65□□□□□ -2.31
PNPT1-203ENST00000415489 WDFY3Q8IZQ1 3526 aa0.65□□□□□ -2.31
PNPT1-203ENST00000415489 DNAH6Q9C0G6 4158 aa0.65□□□□□ -2.31
PNPT1-203ENST00000415489 ADGRG4Q8IZF6 3080 aa0.65□□□□□ -2.31
PNPT1-203ENST00000415489 MYO15AQ9UKN7 3530 aa0.64□□□□□ -2.31
PNPT1-203ENST00000415489 FAT2Q9NYQ8 4349 aa0.64□□□□□ -2.31
PNPT1-203ENST00000415489 SPRR2AP35326 72 aa0.64□□□□□ -2.31
PNPT1-203ENST00000415489 KRTAP19-5Q3LI72 72 aa0.64□□□□□ -2.31
PNPT1-203ENST00000415489 FAT3Q8TDW7 4589 aa0.64□□□□□ -2.31
PNPT1-203ENST00000415489 DNAH17Q9UFH2 4485 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms