RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
SCARB1-203ENST00000415380 RPL37P61927 97 aaKnown RBP9.25□□□□□ -0.93
SCARB1-203ENST00000415380 HSPG2P98160 4391 aa9.23□□□□□ -0.93
SCARB1-203ENST00000415380 KMT2CQ8NEZ4 4911 aaKnown RBP9.2□□□□□ -0.94
SCARB1-203ENST00000415380 KRTAP13-4Q3LI77 160 aa9.19□□□□□ -0.94
SCARB1-203ENST00000415380 CRIPTQ9P021 101 aa9.19□□□□□ -0.94
SCARB1-203ENST00000415380 XP32Q5T750 250 aa9.18□□□□□ -0.94
SCARB1-203ENST00000415380 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
SCARB1-203ENST00000415380 S4R3F8 94 aa9.16□□□□□ -0.94
SCARB1-203ENST00000415380 DMBT1Q9UGM3 2413 aaPredicted RBP9.14□□□□□ -0.95
SCARB1-203ENST00000415380 ROMO1P60602 79 aa9.13□□□□□ -0.95
SCARB1-203ENST00000415380 A0A0D9SG42 100 aa9.13□□□□□ -0.95
SCARB1-203ENST00000415380 Q5VSD8 79 aa9.12□□□□□ -0.95
SCARB1-203ENST00000415380 MYCBP2O75592 4640 aa9.08□□□□□ -0.96
SCARB1-203ENST00000415380 P0C880 135 aa9.06□□□□□ -0.96
SCARB1-203ENST00000415380 RYR3Q15413 4870 aa8.97□□□□□ -0.97
SCARB1-203ENST00000415380 KRTAP17-1Q9BYP8 105 aa8.96□□□□□ -0.97
SCARB1-203ENST00000415380 RYR1P21817 5038 aa8.94□□□□□ -0.98
SCARB1-203ENST00000415380 H3BS24 57 aa8.94□□□□□ -0.98
SCARB1-203ENST00000415380 TPRXLQ17RH7 258 aa8.93□□□□□ -0.98
SCARB1-203ENST00000415380 MT1HL1P0DM35 61 aa8.92□□□□□ -0.98
SCARB1-203ENST00000415380 KRTAP12-2P59991 146 aa8.9□□□□□ -0.98
SCARB1-203ENST00000415380 LPAP08519 4548 aa8.88□□□□□ -0.99
SCARB1-203ENST00000415380 C10orf95Q9H7T3 257 aa8.85□□□□□ -0.99
SCARB1-203ENST00000415380 KRTAP12-1P59990 96 aa8.82□□□□□ -1
SCARB1-203ENST00000415380 SPINT4Q6UDR6 99 aa8.8□□□□□ -1
SCARB1-203ENST00000415380 LRP2P98164 4655 aa8.78□□□□□ -1
SCARB1-203ENST00000415380 KIAA1109Q2LD37 5005 aa8.77□□□□□ -1.01
SCARB1-203ENST00000415380 M0QZ58 72 aa8.73□□□□□ -1.01
SCARB1-203ENST00000415380 EPPK1P58107 5090 aaKnown RBP8.66□□□□□ -1.02
SCARB1-203ENST00000415380 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
SCARB1-203ENST00000415380 ABCA13Q86UQ4 5058 aa8.56□□□□□ -1.04
SCARB1-203ENST00000415380 R4GN34 69 aa8.5□□□□□ -1.05
SCARB1-203ENST00000415380 MUC17Q685J3 4493 aa8.43□□□□□ -1.06
SCARB1-203ENST00000415380 KRTAP4-5Q9BYR2 181 aa8.43□□□□□ -1.06
SCARB1-203ENST00000415380 LORP23490 312 aaPredicted RBP8.42□□□□□ -1.06
SCARB1-203ENST00000415380 SEC61BP60468 96 aaKnown RBP8.41□□□□□ -1.06
SCARB1-203ENST00000415380 NDUFAF8A1L188 74 aa8.38□□□□□ -1.07
SCARB1-203ENST00000415380 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
SCARB1-203ENST00000415380 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
SCARB1-203ENST00000415380 J3QL48 77 aa8.16□□□□□ -1.1
SCARB1-203ENST00000415380 BIRC6Q9NR09 4857 aa8.15□□□□□ -1.1
SCARB1-203ENST00000415380 HERC2O95714 4834 aa8.14□□□□□ -1.11
SCARB1-203ENST00000415380 PLAC4Q8WY50 150 aa8.12□□□□□ -1.11
SCARB1-203ENST00000415380 CAMK2N1Q7Z7J9 78 aa8.09□□□□□ -1.11
SCARB1-203ENST00000415380 MUC2Q02817 5179 aa8.05□□□□□ -1.12
SCARB1-203ENST00000415380 PP632Q6XCG6 107 aa8.01□□□□□ -1.13
SCARB1-203ENST00000415380 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
SCARB1-203ENST00000415380 PCLOQ9Y6V0 5065 aa7.88□□□□□ -1.15
SCARB1-203ENST00000415380 HERC1Q15751 4861 aa7.84□□□□□ -1.15
SCARB1-203ENST00000415380 TNP1P09430 55 aa7.8□□□□□ -1.16
SCARB1-203ENST00000415380 LUZP6Q538Z0 58 aa7.75□□□□□ -1.17
SCARB1-203ENST00000415380 KRTAP23-1A1A580 65 aa7.72□□□□□ -1.17
SCARB1-203ENST00000415380 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
SCARB1-203ENST00000415380 HMCN2Q8NDA2 5059 aa7.65□□□□□ -1.18
SCARB1-203ENST00000415380 SPRR2GQ9BYE4 73 aa7.62□□□□□ -1.19
SCARB1-203ENST00000415380 FAT4Q6V0I7 4981 aa7.61□□□□□ -1.19
SCARB1-203ENST00000415380 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
SCARB1-203ENST00000415380 SPRR5A0A1B0GTR4 108 aa7.55□□□□□ -1.2
SCARB1-203ENST00000415380 M0R2T5 61 aa7.49□□□□□ -1.21
SCARB1-203ENST00000415380 A0A0A0MQY5 61 aa7.45□□□□□ -1.22
SCARB1-203ENST00000415380 MT1HP80294 61 aa7.44□□□□□ -1.22
SCARB1-203ENST00000415380 LCE3AQ5TA76 89 aa7.4□□□□□ -1.22
SCARB1-203ENST00000415380 MT1FP04733 61 aa7.38□□□□□ -1.23
SCARB1-203ENST00000415380 MT2AP02795 61 aa7.37□□□□□ -1.23
SCARB1-203ENST00000415380 UBR4Q5T4S7 5183 aa7.37□□□□□ -1.23
SCARB1-203ENST00000415380 KRTAP10-10P60014 251 aa7.36□□□□□ -1.23
SCARB1-203ENST00000415380 RNF213Q63HN8 5207 aa7.36□□□□□ -1.23
SCARB1-203ENST00000415380 KRTAP9-8Q9BYQ0 159 aa7.3□□□□□ -1.24
SCARB1-203ENST00000415380 KRTAP19-8Q3LI54 63 aa7.25□□□□□ -1.25
SCARB1-203ENST00000415380 KRTAP8-1Q8IUC2 63 aa7.2□□□□□ -1.26
SCARB1-203ENST00000415380 MT1BP07438 61 aa7.17□□□□□ -1.26
SCARB1-203ENST00000415380 KRTAP10-5P60370 271 aa7.17□□□□□ -1.26
SCARB1-203ENST00000415380 MT1XP80297 61 aa7.15□□□□□ -1.26
SCARB1-203ENST00000415380 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
SCARB1-203ENST00000415380 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
SCARB1-203ENST00000415380 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
SCARB1-203ENST00000415380 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
SCARB1-203ENST00000415380 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
SCARB1-203ENST00000415380 INE1O15225 51 aa6.72□□□□□ -1.33
SCARB1-203ENST00000415380 KRTAP19-5Q3LI72 72 aa6.7□□□□□ -1.34
SCARB1-203ENST00000415380 USH2AO75445 5202 aa6.69□□□□□ -1.34
SCARB1-203ENST00000415380 LCE2BO14633 110 aa6.69□□□□□ -1.34
SCARB1-203ENST00000415380 KMT2DO14686 5537 aa6.68□□□□□ -1.34
SCARB1-203ENST00000415380 LCE3CQ5T5A8 94 aa6.63□□□□□ -1.35
SCARB1-203ENST00000415380 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
SCARB1-203ENST00000415380 KRTAP4-8A0A0G2JLE6 195 aa6.52□□□□□ -1.37
SCARB1-203ENST00000415380 KRTAP4-8Q9BYQ9 185 aa6.52□□□□□ -1.37
SCARB1-203ENST00000415380 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
SCARB1-203ENST00000415380 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
SCARB1-203ENST00000415380 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
SCARB1-203ENST00000415380 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
SCARB1-203ENST00000415380 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
SCARB1-203ENST00000415380 KRTAP2-1Q9BYU5 128 aa6.23□□□□□ -1.41
SCARB1-203ENST00000415380 MT1LQ93083 61 aa6.19□□□□□ -1.42
SCARB1-203ENST00000415380 MT1EP04732 61 aa6.18□□□□□ -1.42
SCARB1-203ENST00000415380 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
SCARB1-203ENST00000415380 SSPOA2VEC9 5147 aa6.1□□□□□ -1.43
SCARB1-203ENST00000415380 FSIP2Q5CZC0 6907 aa6.09□□□□□ -1.43
SCARB1-203ENST00000415380 KRTAP19-6Q3LI70 58 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms