RNA–Protein interactions for RNA: ENST00000414600.1

SOX9-AS1-202, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 742 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-202ENST00000414600 A0A096LPF7 62 aa3.81□□□□□ -1.8
SOX9-AS1-202ENST00000414600 RYR1P21817 5038 aa3.8□□□□□ -1.8
SOX9-AS1-202ENST00000414600 KRTAP1-4P0C5Y4 121 aa3.79□□□□□ -1.8
SOX9-AS1-202ENST00000414600 Q6ZRX8 168 aa3.79□□□□□ -1.8
SOX9-AS1-202ENST00000414600 IGKV2-24A0A0C4DH68 120 aa3.78□□□□□ -1.8
SOX9-AS1-202ENST00000414600 SMIM11BQ8TCY0 68 aa3.78□□□□□ -1.8
SOX9-AS1-202ENST00000414600 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
SOX9-AS1-202ENST00000414600 LRP1BQ9NZR2 4599 aa3.78□□□□□ -1.8
SOX9-AS1-202ENST00000414600 ABCA13Q86UQ4 5058 aa3.77□□□□□ -1.81
SOX9-AS1-202ENST00000414600 HSPG2P98160 4391 aa3.77□□□□□ -1.81
SOX9-AS1-202ENST00000414600 GVQW2A0A096LPI5 108 aaPredicted RBP3.76□□□□□ -1.81
SOX9-AS1-202ENST00000414600 SSBP3-AS1Q7Z2R9 100 aa3.76□□□□□ -1.81
SOX9-AS1-202ENST00000414600 TMEM167BQ9NRX6 74 aa3.76□□□□□ -1.81
SOX9-AS1-202ENST00000414600 DNAH5Q8TE73 4624 aa3.75□□□□□ -1.81
SOX9-AS1-202ENST00000414600 WFDC10BQ8IUB3 73 aa3.75□□□□□ -1.81
SOX9-AS1-202ENST00000414600 H3BNG1 76 aa3.74□□□□□ -1.81
SOX9-AS1-202ENST00000414600 PRO0255Q9UI72 69 aa3.74□□□□□ -1.81
SOX9-AS1-202ENST00000414600 APOBP04114 4563 aaKnown RBP3.74□□□□□ -1.81
SOX9-AS1-202ENST00000414600 CRIP1P50238 77 aa3.73□□□□□ -1.81
SOX9-AS1-202ENST00000414600 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
SOX9-AS1-202ENST00000414600 KRTAP10-1P60331 282 aa3.7□□□□□ -1.82
SOX9-AS1-202ENST00000414600 SMR3BP02814 79 aaPredicted RBP3.69□□□□□ -1.82
SOX9-AS1-202ENST00000414600 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
SOX9-AS1-202ENST00000414600 FAT1Q14517 4588 aa3.69□□□□□ -1.82
SOX9-AS1-202ENST00000414600 FLG2Q5D862 2391 aaPredicted RBP3.69□□□□□ -1.82
SOX9-AS1-202ENST00000414600 ANGP03950 147 aaKnown RBP3.67□□□□□ -1.82
SOX9-AS1-202ENST00000414600 IGFL1Q6UW32 110 aa3.67□□□□□ -1.82
SOX9-AS1-202ENST00000414600 DEFB104AQ8WTQ1 72 aa3.67□□□□□ -1.82
SOX9-AS1-202ENST00000414600 MT3P25713 68 aa3.66□□□□□ -1.82
SOX9-AS1-202ENST00000414600 LINC01556Q5JQF7 62 aa3.66□□□□□ -1.82
SOX9-AS1-202ENST00000414600 LELP1Q5T871 98 aa3.66□□□□□ -1.82
SOX9-AS1-202ENST00000414600 DNAH8Q96JB1 4490 aa3.65□□□□□ -1.83
SOX9-AS1-202ENST00000414600 Q5VSD8 79 aa3.63□□□□□ -1.83
SOX9-AS1-202ENST00000414600 LINC00158P58513 81 aa3.62□□□□□ -1.83
SOX9-AS1-202ENST00000414600 CLPSL2Q6UWE3 100 aa3.61□□□□□ -1.83
SOX9-AS1-202ENST00000414600 HERC1Q15751 4861 aa3.6□□□□□ -1.83
SOX9-AS1-202ENST00000414600 M0QY20 66 aa3.59□□□□□ -1.83
SOX9-AS1-202ENST00000414600 VPS13BQ7Z7G8 4022 aa3.59□□□□□ -1.83
SOX9-AS1-202ENST00000414600 GAS8-AS1O95177 125 aa3.58□□□□□ -1.84
SOX9-AS1-202ENST00000414600 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
SOX9-AS1-202ENST00000414600 UNQ6190/PRO20217Q6UXQ8 127 aa3.58□□□□□ -1.84
SOX9-AS1-202ENST00000414600 LINC00575Q6W349 94 aa3.58□□□□□ -1.84
SOX9-AS1-202ENST00000414600 Q8IZM0 81 aa3.58□□□□□ -1.84
SOX9-AS1-202ENST00000414600 CDKN2A-AS1Q9UH64 79 aa3.58□□□□□ -1.84
SOX9-AS1-202ENST00000414600 MYCBP2O75592 4640 aa3.57□□□□□ -1.84
SOX9-AS1-202ENST00000414600 Q6ZSA8 131 aa3.57□□□□□ -1.84
SOX9-AS1-202ENST00000414600 LINC00308Q8TCZ7 52 aa3.57□□□□□ -1.84
SOX9-AS1-202ENST00000414600 RPL39LQ96EH5 51 aaKnown RBP3.57□□□□□ -1.84
SOX9-AS1-202ENST00000414600 SMIM2Q9BVW6 85 aa3.57□□□□□ -1.84
SOX9-AS1-202ENST00000414600 DMBT1Q9UGM3 2413 aaPredicted RBP3.56□□□□□ -1.84
SOX9-AS1-202ENST00000414600 RPL37P61927 97 aaKnown RBP3.56□□□□□ -1.84
SOX9-AS1-202ENST00000414600 SRRM2Q9UQ35 2752 aaKnown RBP3.56□□□□□ -1.84
SOX9-AS1-202ENST00000414600 KRTAP10-4P60372 401 aaPredicted RBP3.55□□□□□ -1.84
SOX9-AS1-202ENST00000414600 LRP1Q07954 4544 aaKnown RBP3.54□□□□□ -1.84
SOX9-AS1-202ENST00000414600 CNFNQ9BYD5 112 aa3.54□□□□□ -1.84
SOX9-AS1-202ENST00000414600 PKHD1L1Q86WI1 4243 aa3.5□□□□□ -1.85
SOX9-AS1-202ENST00000414600 FAT3Q8TDW7 4589 aa3.5□□□□□ -1.85
SOX9-AS1-202ENST00000414600 NDUFA1O15239 70 aa3.5□□□□□ -1.85
SOX9-AS1-202ENST00000414600 COX6A2Q02221 97 aa3.5□□□□□ -1.85
SOX9-AS1-202ENST00000414600 CRIPTQ9P021 101 aa3.5□□□□□ -1.85
SOX9-AS1-202ENST00000414600 POLR2KP53803 58 aaKnown RBP3.49□□□□□ -1.85
SOX9-AS1-202ENST00000414600 KRTAP13-4Q3LI77 160 aa3.49□□□□□ -1.85
SOX9-AS1-202ENST00000414600 A0A096LNI7 61 aa3.47□□□□□ -1.85
SOX9-AS1-202ENST00000414600 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
SOX9-AS1-202ENST00000414600 RPL39P62891 51 aaKnown RBP3.46□□□□□ -1.86
SOX9-AS1-202ENST00000414600 K7EQZ3 153 aa3.45□□□□□ -1.86
SOX9-AS1-202ENST00000414600 MT1HL1P0DM35 61 aa3.45□□□□□ -1.86
SOX9-AS1-202ENST00000414600 COX6B2Q6YFQ2 88 aa3.45□□□□□ -1.86
SOX9-AS1-202ENST00000414600 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
SOX9-AS1-202ENST00000414600 UBR4Q5T4S7 5183 aa3.43□□□□□ -1.86
SOX9-AS1-202ENST00000414600 TNXBP22105 4242 aa3.42□□□□□ -1.86
SOX9-AS1-202ENST00000414600 MRPL34Q9BQ48 92 aaKnown RBP3.42□□□□□ -1.86
SOX9-AS1-202ENST00000414600 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
SOX9-AS1-202ENST00000414600 C6orf48Q9UBA6 75 aa3.39□□□□□ -1.87
SOX9-AS1-202ENST00000414600 TP53AIP1Q9HCN2 124 aa3.38□□□□□ -1.87
SOX9-AS1-202ENST00000414600 SPINK6Q6UWN8 80 aa3.36□□□□□ -1.87
SOX9-AS1-202ENST00000414600 TOMM7Q9P0U1 55 aa3.36□□□□□ -1.87
SOX9-AS1-202ENST00000414600 LRP2P98164 4655 aa3.35□□□□□ -1.87
SOX9-AS1-202ENST00000414600 H0YAA0 97 aa3.34□□□□□ -1.87
SOX9-AS1-202ENST00000414600 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
SOX9-AS1-202ENST00000414600 LPAP08519 4548 aa3.32□□□□□ -1.88
SOX9-AS1-202ENST00000414600 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
SOX9-AS1-202ENST00000414600 PCOTHQ58A44 107 aa3.3□□□□□ -1.88
SOX9-AS1-202ENST00000414600 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
SOX9-AS1-202ENST00000414600 PRLHP81277 87 aa3.24□□□□□ -1.89
SOX9-AS1-202ENST00000414600 C10orf95Q9H7T3 257 aa3.24□□□□□ -1.89
SOX9-AS1-202ENST00000414600 KRTAP13-1Q8IUC0 172 aa3.23□□□□□ -1.89
SOX9-AS1-202ENST00000414600 IGLV5-48A0A075B6I7 105 aa3.18□□□□□ -1.9
SOX9-AS1-202ENST00000414600 MUC2Q02817 5179 aa3.18□□□□□ -1.9
SOX9-AS1-202ENST00000414600 WFDC13Q8IUB5 93 aa3.17□□□□□ -1.9
SOX9-AS1-202ENST00000414600 H1FX-AS1Q4G0G2 97 aa3.15□□□□□ -1.91
SOX9-AS1-202ENST00000414600 SPRR1AP35321 89 aa3.14□□□□□ -1.91
SOX9-AS1-202ENST00000414600 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
SOX9-AS1-202ENST00000414600 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
SOX9-AS1-202ENST00000414600 KRTAP12-1P59990 96 aa3.13□□□□□ -1.91
SOX9-AS1-202ENST00000414600 MUC17Q685J3 4493 aa3.12□□□□□ -1.91
SOX9-AS1-202ENST00000414600 KRTAP4-1Q9BYQ7 146 aa3.1□□□□□ -1.91
SOX9-AS1-202ENST00000414600 KRTAP13-3Q3SY46 172 aa3.08□□□□□ -1.92
SOX9-AS1-202ENST00000414600 SPINK1P00995 79 aa3.07□□□□□ -1.92
SOX9-AS1-202ENST00000414600 DEFB105AQ8NG35 78 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms