RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 TLN2Q9Y4G6 2542 aa-0.17□□□□□ -2.44
ATG4C-204ENST00000414558 USH2AO75445 5202 aa-0.18□□□□□ -2.44
ATG4C-204ENST00000414558 H0YGX0 51 aa-0.18□□□□□ -2.44
ATG4C-204ENST00000414558 M0QY20 66 aa-0.18□□□□□ -2.44
ATG4C-204ENST00000414558 LINC00308Q8TCZ7 52 aa-0.18□□□□□ -2.44
ATG4C-204ENST00000414558 ABRACLQ9P1F3 81 aa-0.18□□□□□ -2.44
ATG4C-204ENST00000414558 COL12A1Q99715 3063 aa-0.18□□□□□ -2.44
ATG4C-204ENST00000414558 SPTBN5Q9NRC6 3674 aaKnown RBP-0.18□□□□□ -2.44
ATG4C-204ENST00000414558 AGLP35573 1532 aa-0.18□□□□□ -2.44
ATG4C-204ENST00000414558 DDX60Q8IY21 1712 aaKnown RBP-0.18□□□□□ -2.44
ATG4C-204ENST00000414558 FRYQ5TBA9 3013 aa-0.19□□□□□ -2.44
ATG4C-204ENST00000414558 ABCC8Q09428 1581 aa-0.19□□□□□ -2.44
ATG4C-204ENST00000414558 A8MTW9 85 aa-0.19□□□□□ -2.44
ATG4C-204ENST00000414558 IQGAP1P46940 1657 aa-0.19□□□□□ -2.44
ATG4C-204ENST00000414558 CMYA5Q8N3K9 4069 aa-0.19□□□□□ -2.44
ATG4C-204ENST00000414558 ITPR1Q14643 2758 aa-0.19□□□□□ -2.44
ATG4C-204ENST00000414558 USP9YO00507 2555 aaPredicted RBP-0.19□□□□□ -2.44
ATG4C-204ENST00000414558 CELSR3Q9NYQ7 3312 aa-0.2□□□□□ -2.44
ATG4C-204ENST00000414558 SMIM27A0A1W2PRY6 76 aa-0.2□□□□□ -2.44
ATG4C-204ENST00000414558 M0QZ58 72 aa-0.2□□□□□ -2.44
ATG4C-204ENST00000414558 PLNP26678 52 aa-0.2□□□□□ -2.44
ATG4C-204ENST00000414558 CLPSL2Q6UWE3 100 aa-0.2□□□□□ -2.44
ATG4C-204ENST00000414558 HERC2O95714 4834 aa-0.2□□□□□ -2.44
ATG4C-204ENST00000414558 RYR1P21817 5038 aa-0.21□□□□□ -2.44
ATG4C-204ENST00000414558 FANCD2Q9BXW9 1451 aa-0.21□□□□□ -2.44
ATG4C-204ENST00000414558 USP9XQ93008 2570 aaPredicted RBP-0.21□□□□□ -2.44
ATG4C-204ENST00000414558 EPPK1P58107 5090 aaKnown RBP-0.21□□□□□ -2.44
ATG4C-204ENST00000414558 KRTAP19-5Q3LI72 72 aa-0.21□□□□□ -2.44
ATG4C-204ENST00000414558 KAAG1Q9UBP8 84 aa-0.21□□□□□ -2.44
ATG4C-204ENST00000414558 DSTQ03001 7570 aaKnown RBP-0.21□□□□□ -2.44
ATG4C-204ENST00000414558 PLECQ15149 4684 aaKnown RBP-0.21□□□□□ -2.44
ATG4C-204ENST00000414558 COL6A5A8TX70 2615 aa-0.21□□□□□ -2.44
ATG4C-204ENST00000414558 CLTCL1P53675 1640 aa-0.22□□□□□ -2.44
ATG4C-204ENST00000414558 DEFB1P60022 68 aa-0.22□□□□□ -2.44
ATG4C-204ENST00000414558 MT1HP80294 61 aa-0.22□□□□□ -2.44
ATG4C-204ENST00000414558 KRTAP8-1Q8IUC2 63 aa-0.22□□□□□ -2.44
ATG4C-204ENST00000414558 TEX15Q9BXT5 2789 aa-0.22□□□□□ -2.44
ATG4C-204ENST00000414558 C5orf42Q9H799 3197 aa-0.22□□□□□ -2.44
ATG4C-204ENST00000414558 MT4P47944 62 aa-0.23□□□□□ -2.45
ATG4C-204ENST00000414558 WFDC10BQ8IUB3 73 aa-0.23□□□□□ -2.45
ATG4C-204ENST00000414558 DNHD1Q96M86 4753 aa-0.23□□□□□ -2.45
ATG4C-204ENST00000414558 DEFB131AP59861 70 aa-0.24□□□□□ -2.45
ATG4C-204ENST00000414558 KRTAP20-2Q3LI61 65 aa-0.24□□□□□ -2.45
ATG4C-204ENST00000414558 CMC2Q9NRP2 79 aa-0.24□□□□□ -2.45
ATG4C-204ENST00000414558 DNAH10Q8IVF4 4471 aa-0.24□□□□□ -2.45
ATG4C-204ENST00000414558 LAMA3Q16787 3333 aa-0.25□□□□□ -2.45
ATG4C-204ENST00000414558 DNAH17Q9UFH2 4485 aa-0.25□□□□□ -2.45
ATG4C-204ENST00000414558 CHD7Q9P2D1 2997 aa-0.25□□□□□ -2.45
ATG4C-204ENST00000414558 SMR3BP02814 79 aaPredicted RBP-0.25□□□□□ -2.45
ATG4C-204ENST00000414558 TRPM2O94759 1503 aa-0.25□□□□□ -2.45
ATG4C-204ENST00000414558 MGAQ8IWI9 3026 aa-0.26□□□□□ -2.45
ATG4C-204ENST00000414558 SPTAN1Q13813 2472 aaKnown RBP-0.26□□□□□ -2.45
ATG4C-204ENST00000414558 LINC01546A6NGU7 62 aa-0.26□□□□□ -2.45
ATG4C-204ENST00000414558 RNF213Q63HN8 5207 aa-0.26□□□□□ -2.45
ATG4C-204ENST00000414558 DYNC1H1Q14204 4646 aaKnown RBP-0.26□□□□□ -2.45
ATG4C-204ENST00000414558 SRCAPQ6ZRS2 3230 aa-0.26□□□□□ -2.45
ATG4C-204ENST00000414558 BIRC6Q9NR09 4857 aa-0.27□□□□□ -2.45
ATG4C-204ENST00000414558 NFAT5O94916 1531 aa-0.27□□□□□ -2.45
ATG4C-204ENST00000414558 SMIM2Q9BVW6 85 aa-0.27□□□□□ -2.45
ATG4C-204ENST00000414558 NIPBLQ6KC79 2804 aaeCLIP-0.27□□□□□ -2.45
ATG4C-204ENST00000414558 ADGRG4Q8IZF6 3080 aa-0.27□□□□□ -2.45
ATG4C-204ENST00000414558 CSMD1Q96PZ7 3565 aa-0.27□□□□□ -2.45
ATG4C-204ENST00000414558 LRBAP50851 2863 aa-0.28□□□□□ -2.45
ATG4C-204ENST00000414558 SPART-AS1P0CW21 52 aa-0.28□□□□□ -2.45
ATG4C-204ENST00000414558 LAMA2P24043 3122 aaKnown RBP-0.28□□□□□ -2.45
ATG4C-204ENST00000414558 TRRAPQ9Y4A5 3859 aa-0.28□□□□□ -2.45
ATG4C-204ENST00000414558 IQGAP2Q13576 1575 aa-0.28□□□□□ -2.45
ATG4C-204ENST00000414558 TFF3Q07654 80 aa-0.29□□□□□ -2.46
ATG4C-204ENST00000414558 HYDINQ4G0P3 5121 aa-0.29□□□□□ -2.46
ATG4C-204ENST00000414558 ZFHX4Q86UP3 3567 aa-0.3□□□□□ -2.46
ATG4C-204ENST00000414558 MYO9AB2RTY4 2548 aa-0.3□□□□□ -2.46
ATG4C-204ENST00000414558 MT1EP04732 61 aa-0.3□□□□□ -2.46
ATG4C-204ENST00000414558 SNRPGP15A8MWD9 76 aa-0.31□□□□□ -2.46
ATG4C-204ENST00000414558 POLR2KP53803 58 aaKnown RBP-0.31□□□□□ -2.46
ATG4C-204ENST00000414558 MT1XP80297 61 aa-0.31□□□□□ -2.46
ATG4C-204ENST00000414558 DOPEY1Q5JWR5 2465 aa-0.32□□□□□ -2.46
ATG4C-204ENST00000414558 NDUFA1O15239 70 aa-0.32□□□□□ -2.46
ATG4C-204ENST00000414558 CRYBG3Q68DQ2 2970 aa-0.32□□□□□ -2.46
ATG4C-204ENST00000414558 CFAP46Q8IYW2 2715 aa-0.32□□□□□ -2.46
ATG4C-204ENST00000414558 EYSQ5T1H1 3165 aa-0.33□□□□□ -2.46
ATG4C-204ENST00000414558 DNAH5Q8TE73 4624 aa-0.33□□□□□ -2.46
ATG4C-204ENST00000414558 MT1LQ93083 61 aa-0.33□□□□□ -2.46
ATG4C-204ENST00000414558 RYR2Q92736 4967 aa-0.33□□□□□ -2.46
ATG4C-204ENST00000414558 CSMD2Q7Z408 3487 aa-0.34□□□□□ -2.46
ATG4C-204ENST00000414558 DMXL2Q8TDJ6 3036 aa-0.34□□□□□ -2.46
ATG4C-204ENST00000414558 CEP295Q9C0D2 2601 aa-0.34□□□□□ -2.46
ATG4C-204ENST00000414558 LEAP2Q969E1 77 aa-0.35□□□□□ -2.47
ATG4C-204ENST00000414558 KIAA1109Q2LD37 5005 aa-0.35□□□□□ -2.47
ATG4C-204ENST00000414558 ATP7AQ04656 1500 aa-0.35□□□□□ -2.47
ATG4C-204ENST00000414558 SMG1Q96Q15 3661 aaKnown RBP-0.35□□□□□ -2.47
ATG4C-204ENST00000414558 RYR3Q15413 4870 aa-0.36□□□□□ -2.47
ATG4C-204ENST00000414558 TLN1Q9Y490 2541 aaKnown RBP-0.37□□□□□ -2.47
ATG4C-204ENST00000414558 MT1HL1P0DM35 61 aa-0.38□□□□□ -2.47
ATG4C-204ENST00000414558 DEFB136Q30KP8 78 aa-0.38□□□□□ -2.47
ATG4C-204ENST00000414558 SAMD9LQ8IVG5 1584 aa-0.38□□□□□ -2.47
ATG4C-204ENST00000414558 VPS13CQ709C8 3753 aa-0.38□□□□□ -2.47
ATG4C-204ENST00000414558 ITPR2Q14571 2701 aa-0.38□□□□□ -2.47
ATG4C-204ENST00000414558 PRUNE2Q8WUY3 3088 aa-0.4□□□□□ -2.47
ATG4C-204ENST00000414558 TOMM5Q8N4H5 51 aa-0.4□□□□□ -2.47
ATG4C-204ENST00000414558 FRYLO94915 3013 aa-0.41□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms