RNA–Protein interactions for RNA: ENST00000414362.6

MCF2L2-202, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2 BASIC

Gene MCF2L2, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-202ENST00000414362 STARD9Q9P2P6 4700 aa3.06□□□□□ -1.92
MCF2L2-202ENST00000414362 RYR2Q92736 4967 aa3.05□□□□□ -1.92
MCF2L2-202ENST00000414362 PLECQ15149 4684 aaKnown RBP3.05□□□□□ -1.92
MCF2L2-202ENST00000414362 SSBP3-AS1Q7Z2R9 100 aa3.05□□□□□ -1.92
MCF2L2-202ENST00000414362 VPS13DQ5THJ4 4388 aa3.05□□□□□ -1.92
MCF2L2-202ENST00000414362 SRRM2Q9UQ35 2752 aaKnown RBP3.04□□□□□ -1.92
MCF2L2-202ENST00000414362 KRTAP1-5Q9BYS1 174 aa3.04□□□□□ -1.92
MCF2L2-202ENST00000414362 DNAH17Q9UFH2 4485 aa3.04□□□□□ -1.92
MCF2L2-202ENST00000414362 DNAH10Q8IVF4 4471 aa3.03□□□□□ -1.92
MCF2L2-202ENST00000414362 KRTAP10-2P60368 255 aa3.03□□□□□ -1.92
MCF2L2-202ENST00000414362 SACSQ9NZJ4 4579 aa3.02□□□□□ -1.93
MCF2L2-202ENST00000414362 PRLHP81277 87 aa3.01□□□□□ -1.93
MCF2L2-202ENST00000414362 RPL37P61927 97 aaKnown RBP3□□□□□ -1.93
MCF2L2-202ENST00000414362 Q8N1X5 172 aa2.99□□□□□ -1.93
MCF2L2-202ENST00000414362 BIRC6Q9NR09 4857 aa2.98□□□□□ -1.93
MCF2L2-202ENST00000414362 KMT2CQ8NEZ4 4911 aaKnown RBP2.97□□□□□ -1.93
MCF2L2-202ENST00000414362 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
MCF2L2-202ENST00000414362 CRIPTQ9P021 101 aa2.96□□□□□ -1.94
MCF2L2-202ENST00000414362 FRAS1Q86XX4 4008 aa2.96□□□□□ -1.94
MCF2L2-202ENST00000414362 TYMSOSQ8TAI1 123 aa2.96□□□□□ -1.94
MCF2L2-202ENST00000414362 RYR3Q15413 4870 aa2.96□□□□□ -1.94
MCF2L2-202ENST00000414362 DNAH11Q96DT5 4516 aa2.95□□□□□ -1.94
MCF2L2-202ENST00000414362 A0A096LNI7 61 aa2.95□□□□□ -1.94
MCF2L2-202ENST00000414362 KRTAP10-1P60331 282 aa2.94□□□□□ -1.94
MCF2L2-202ENST00000414362 DNAH2Q9P225 4427 aa2.94□□□□□ -1.94
MCF2L2-202ENST00000414362 HECTD4Q9Y4D8 3996 aa2.94□□□□□ -1.94
MCF2L2-202ENST00000414362 DYNC1H1Q14204 4646 aaKnown RBP2.94□□□□□ -1.94
MCF2L2-202ENST00000414362 SPACA4Q8TDM5 124 aa2.93□□□□□ -1.94
MCF2L2-202ENST00000414362 PLAC4Q8WY50 150 aa2.93□□□□□ -1.94
MCF2L2-202ENST00000414362 KMT2AQ03164 3969 aa2.93□□□□□ -1.94
MCF2L2-202ENST00000414362 HYDINQ4G0P3 5121 aa2.92□□□□□ -1.94
MCF2L2-202ENST00000414362 KRTAP3-1Q9BYR8 98 aa2.92□□□□□ -1.94
MCF2L2-202ENST00000414362 FAT2Q9NYQ8 4349 aa2.92□□□□□ -1.94
MCF2L2-202ENST00000414362 Q5VSD8 79 aa2.91□□□□□ -1.94
MCF2L2-202ENST00000414362 PKD1P98161 4303 aa2.9□□□□□ -1.94
MCF2L2-202ENST00000414362 SPINK6Q6UWN8 80 aa2.88□□□□□ -1.95
MCF2L2-202ENST00000414362 DNAH8Q96JB1 4490 aa2.88□□□□□ -1.95
MCF2L2-202ENST00000414362 HERC2O95714 4834 aa2.88□□□□□ -1.95
MCF2L2-202ENST00000414362 KRTAP10-4P60372 401 aaPredicted RBP2.87□□□□□ -1.95
MCF2L2-202ENST00000414362 INE1O15225 51 aa2.87□□□□□ -1.95
MCF2L2-202ENST00000414362 KRTAP10-6P60371 365 aaPredicted RBP2.87□□□□□ -1.95
MCF2L2-202ENST00000414362 C10orf95Q9H7T3 257 aa2.87□□□□□ -1.95
MCF2L2-202ENST00000414362 EPPK1P58107 5090 aaKnown RBP2.85□□□□□ -1.95
MCF2L2-202ENST00000414362 VPS13BQ7Z7G8 4022 aa2.85□□□□□ -1.95
MCF2L2-202ENST00000414362 S4R3F8 94 aa2.85□□□□□ -1.95
MCF2L2-202ENST00000414362 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.95
MCF2L2-202ENST00000414362 RYR1P21817 5038 aa2.84□□□□□ -1.96
MCF2L2-202ENST00000414362 PKHD1L1Q86WI1 4243 aa2.83□□□□□ -1.96
MCF2L2-202ENST00000414362 DNAH5Q8TE73 4624 aa2.82□□□□□ -1.96
MCF2L2-202ENST00000414362 APOBP04114 4563 aaKnown RBP2.82□□□□□ -1.96
MCF2L2-202ENST00000414362 LRP1BQ9NZR2 4599 aa2.81□□□□□ -1.96
MCF2L2-202ENST00000414362 SPINK1P00995 79 aa2.81□□□□□ -1.96
MCF2L2-202ENST00000414362 KRTAP13-4Q3LI77 160 aa2.81□□□□□ -1.96
MCF2L2-202ENST00000414362 PKHD1P08F94 4074 aa2.8□□□□□ -1.96
MCF2L2-202ENST00000414362 SMR3BP02814 79 aaPredicted RBP2.8□□□□□ -1.96
MCF2L2-202ENST00000414362 KRTAP12-2P59991 146 aa2.8□□□□□ -1.96
MCF2L2-202ENST00000414362 RPS29P62273 56 aaKnown RBP2.79□□□□□ -1.96
MCF2L2-202ENST00000414362 HSPG2P98160 4391 aa2.79□□□□□ -1.96
MCF2L2-202ENST00000414362 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
MCF2L2-202ENST00000414362 KRTAP12-1P59990 96 aa2.78□□□□□ -1.96
MCF2L2-202ENST00000414362 KRTAP10-8P60410 259 aa2.78□□□□□ -1.96
MCF2L2-202ENST00000414362 MT1HL1P0DM35 61 aa2.76□□□□□ -1.97
MCF2L2-202ENST00000414362 FLG2Q5D862 2391 aaPredicted RBP2.76□□□□□ -1.97
MCF2L2-202ENST00000414362 KIAA1109Q2LD37 5005 aa2.75□□□□□ -1.97
MCF2L2-202ENST00000414362 KRTAP1-4P0C5Y4 121 aa2.74□□□□□ -1.97
MCF2L2-202ENST00000414362 FAT1Q14517 4588 aa2.73□□□□□ -1.97
MCF2L2-202ENST00000414362 M0QZ58 72 aa2.72□□□□□ -1.97
MCF2L2-202ENST00000414362 R4GN34 69 aa2.72□□□□□ -1.97
MCF2L2-202ENST00000414362 MYCBP2O75592 4640 aa2.71□□□□□ -1.98
MCF2L2-202ENST00000414362 DMBT1Q9UGM3 2413 aaPredicted RBP2.7□□□□□ -1.98
MCF2L2-202ENST00000414362 PCLOQ9Y6V0 5065 aa2.69□□□□□ -1.98
MCF2L2-202ENST00000414362 KRTAP13-2Q52LG2 175 aa2.69□□□□□ -1.98
MCF2L2-202ENST00000414362 ABCA13Q86UQ4 5058 aa2.67□□□□□ -1.98
MCF2L2-202ENST00000414362 FAT3Q8TDW7 4589 aa2.66□□□□□ -1.98
MCF2L2-202ENST00000414362 A0A0D9SG42 100 aa2.64□□□□□ -1.99
MCF2L2-202ENST00000414362 LRP1Q07954 4544 aaKnown RBP2.63□□□□□ -1.99
MCF2L2-202ENST00000414362 C9orf92A6NGG3 77 aa2.6□□□□□ -1.99
MCF2L2-202ENST00000414362 TNXBP22105 4242 aa2.6□□□□□ -1.99
MCF2L2-202ENST00000414362 MUC17Q685J3 4493 aa2.54□□□□□ -2
MCF2L2-202ENST00000414362 HMCN2Q8NDA2 5059 aa2.53□□□□□ -2.01
MCF2L2-202ENST00000414362 HERC1Q15751 4861 aa2.52□□□□□ -2.01
MCF2L2-202ENST00000414362 FLGP20930 4061 aaPredicted RBP2.45□□□□□ -2.02
MCF2L2-202ENST00000414362 LRP2P98164 4655 aa2.44□□□□□ -2.02
MCF2L2-202ENST00000414362 LPAP08519 4548 aa2.44□□□□□ -2.02
MCF2L2-202ENST00000414362 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
MCF2L2-202ENST00000414362 KRTAP19-2Q3LHN2 52 aa2.36□□□□□ -2.03
MCF2L2-202ENST00000414362 UBR4Q5T4S7 5183 aa2.36□□□□□ -2.03
MCF2L2-202ENST00000414362 TNP1P09430 55 aa2.36□□□□□ -2.03
MCF2L2-202ENST00000414362 KRTAP4-1Q9BYQ7 146 aa2.36□□□□□ -2.03
MCF2L2-202ENST00000414362 KRTAP10-10P60014 251 aa2.35□□□□□ -2.03
MCF2L2-202ENST00000414362 MUC2Q02817 5179 aa2.35□□□□□ -2.03
MCF2L2-202ENST00000414362 KRTAP5-9P26371 169 aa2.34□□□□□ -2.03
MCF2L2-202ENST00000414362 MT1HP80294 61 aa2.33□□□□□ -2.04
MCF2L2-202ENST00000414362 LCE1AQ5T7P2 110 aa2.33□□□□□ -2.04
MCF2L2-202ENST00000414362 RNF213Q63HN8 5207 aa2.32□□□□□ -2.04
MCF2L2-202ENST00000414362 M0R2T5 61 aa2.26□□□□□ -2.05
MCF2L2-202ENST00000414362 FAT4Q6V0I7 4981 aa2.23□□□□□ -2.05
MCF2L2-202ENST00000414362 KRTAP8-1Q8IUC2 63 aa2.23□□□□□ -2.05
MCF2L2-202ENST00000414362 KRTAP10-7P60409 375 aaPredicted RBP2.22□□□□□ -2.05
MCF2L2-202ENST00000414362 KRTAP10-12P60413 245 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms