RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 AGLP35573 1532 aa0.63□□□□□ -2.31
HMGB3P31-201ENST00000413333 HUWE1Q7Z6Z7 4374 aaKnown RBP0.62□□□□□ -2.31
HMGB3P31-201ENST00000413333 CDC42BPAQ5VT25 1732 aa0.62□□□□□ -2.31
HMGB3P31-201ENST00000413333 SPINK4O60575 86 aa0.62□□□□□ -2.31
HMGB3P31-201ENST00000413333 NMES1Q9C002 83 aa0.62□□□□□ -2.31
HMGB3P31-201ENST00000413333 ABCA5Q8WWZ7 1642 aa0.61□□□□□ -2.31
HMGB3P31-201ENST00000413333 MUC12Q9UKN1 5478 aa0.61□□□□□ -2.31
HMGB3P31-201ENST00000413333 SERF2P84101 59 aa0.61□□□□□ -2.31
HMGB3P31-201ENST00000413333 ABCC8Q09428 1581 aa0.61□□□□□ -2.31
HMGB3P31-201ENST00000413333 NCBP2-AS2Q69YL0 99 aa0.6□□□□□ -2.31
HMGB3P31-201ENST00000413333 USH2AO75445 5202 aa0.59□□□□□ -2.31
HMGB3P31-201ENST00000413333 SNRPGP15A8MWD9 76 aa0.59□□□□□ -2.31
HMGB3P31-201ENST00000413333 LOC730098B7Z3J9 87 aa0.59□□□□□ -2.31
HMGB3P31-201ENST00000413333 HECTD4Q9Y4D8 3996 aa0.58□□□□□ -2.32
HMGB3P31-201ENST00000413333 LYSTQ99698 3801 aa0.58□□□□□ -2.32
HMGB3P31-201ENST00000413333 IAPPP10997 89 aa0.57□□□□□ -2.32
HMGB3P31-201ENST00000413333 AKAP9Q99996 3911 aa0.57□□□□□ -2.32
HMGB3P31-201ENST00000413333 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
HMGB3P31-201ENST00000413333 DEFB130BP0DP73 79 aa0.56□□□□□ -2.32
HMGB3P31-201ENST00000413333 DEFB130AP0DP74 79 aa0.56□□□□□ -2.32
HMGB3P31-201ENST00000413333 LMO7Q8WWI1 1683 aa0.56□□□□□ -2.32
HMGB3P31-201ENST00000413333 DNAH7Q8WXX0 4024 aa0.55□□□□□ -2.32
HMGB3P31-201ENST00000413333 PLNP26678 52 aa0.55□□□□□ -2.32
HMGB3P31-201ENST00000413333 IQGAP1P46940 1657 aa0.55□□□□□ -2.32
HMGB3P31-201ENST00000413333 IQGAP2Q13576 1575 aa0.54□□□□□ -2.32
HMGB3P31-201ENST00000413333 PKHD1P08F94 4074 aa0.54□□□□□ -2.32
HMGB3P31-201ENST00000413333 LRP1Q07954 4544 aaKnown RBP0.54□□□□□ -2.32
HMGB3P31-201ENST00000413333 MINOS1Q5TGZ0 78 aa0.54□□□□□ -2.32
HMGB3P31-201ENST00000413333 CMC2Q9NRP2 79 aa0.54□□□□□ -2.32
HMGB3P31-201ENST00000413333 SPINK1P00995 79 aa0.53□□□□□ -2.32
HMGB3P31-201ENST00000413333 CMYA5Q8N3K9 4069 aa0.53□□□□□ -2.32
HMGB3P31-201ENST00000413333 FAT3Q8TDW7 4589 aa0.53□□□□□ -2.33
HMGB3P31-201ENST00000413333 VPS13BQ7Z7G8 4022 aa0.53□□□□□ -2.33
HMGB3P31-201ENST00000413333 DDX60Q8IY21 1712 aaKnown RBP0.52□□□□□ -2.33
HMGB3P31-201ENST00000413333 RPS27P42677 84 aaKnown RBP0.52□□□□□ -2.33
HMGB3P31-201ENST00000413333 RPS27LQ71UM5 84 aaKnown RBP0.52□□□□□ -2.33
HMGB3P31-201ENST00000413333 HRNRQ86YZ3 2850 aaPredicted RBP0.52□□□□□ -2.33
HMGB3P31-201ENST00000413333 DNAH1Q9P2D7 4330 aa0.51□□□□□ -2.33
HMGB3P31-201ENST00000413333 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
HMGB3P31-201ENST00000413333 H0YGX0 51 aa0.51□□□□□ -2.33
HMGB3P31-201ENST00000413333 C6orf48Q9UBA6 75 aa0.51□□□□□ -2.33
HMGB3P31-201ENST00000413333 FAM208AQ9UK61 1670 aaKnown RBP0.51□□□□□ -2.33
HMGB3P31-201ENST00000413333 U3KQA8 63 aa0.51□□□□□ -2.33
HMGB3P31-201ENST00000413333 DYNC2H1Q8NCM8 4307 aaKnown RBP0.5□□□□□ -2.33
HMGB3P31-201ENST00000413333 TRRAPQ9Y4A5 3859 aa0.5□□□□□ -2.33
HMGB3P31-201ENST00000413333 TMEM167BQ9NRX6 74 aa0.5□□□□□ -2.33
HMGB3P31-201ENST00000413333 MYCBP2O75592 4640 aa0.49□□□□□ -2.33
HMGB3P31-201ENST00000413333 HSPG2P98160 4391 aa0.49□□□□□ -2.33
HMGB3P31-201ENST00000413333 PKD1P98161 4303 aa0.49□□□□□ -2.33
HMGB3P31-201ENST00000413333 SACSQ9NZJ4 4579 aa0.48□□□□□ -2.33
HMGB3P31-201ENST00000413333 LINC01546A6NGU7 62 aa0.48□□□□□ -2.33
HMGB3P31-201ENST00000413333 LINC00308Q8TCZ7 52 aa0.48□□□□□ -2.33
HMGB3P31-201ENST00000413333 LRP1BQ9NZR2 4599 aa0.48□□□□□ -2.33
HMGB3P31-201ENST00000413333 DYNC1H1Q14204 4646 aaKnown RBP0.47□□□□□ -2.33
HMGB3P31-201ENST00000413333 SMIM27A0A1W2PRY6 76 aa0.47□□□□□ -2.33
HMGB3P31-201ENST00000413333 PRM1P04553 51 aa0.47□□□□□ -2.33
HMGB3P31-201ENST00000413333 WT1-ASQ06250 92 aa0.47□□□□□ -2.33
HMGB3P31-201ENST00000413333 M0R2T5 61 aa0.46□□□□□ -2.34
HMGB3P31-201ENST00000413333 ABRACLQ9P1F3 81 aa0.46□□□□□ -2.34
HMGB3P31-201ENST00000413333 LRP2P98164 4655 aa0.45□□□□□ -2.34
HMGB3P31-201ENST00000413333 TOP2AP11388 1531 aaKnown RBP0.45□□□□□ -2.34
HMGB3P31-201ENST00000413333 LPAP08519 4548 aa0.45□□□□□ -2.34
HMGB3P31-201ENST00000413333 DNAH9Q9NYC9 4486 aa0.45□□□□□ -2.34
HMGB3P31-201ENST00000413333 DEFB135Q30KP9 77 aa0.45□□□□□ -2.34
HMGB3P31-201ENST00000413333 S4R3F8 94 aa0.45□□□□□ -2.34
HMGB3P31-201ENST00000413333 NFAT5O94916 1531 aa0.44□□□□□ -2.34
HMGB3P31-201ENST00000413333 DNAH3Q8TD57 4116 aa0.44□□□□□ -2.34
HMGB3P31-201ENST00000413333 PRLHP81277 87 aa0.43□□□□□ -2.34
HMGB3P31-201ENST00000413333 FLGP20930 4061 aaPredicted RBP0.43□□□□□ -2.34
HMGB3P31-201ENST00000413333 PKHD1L1Q86WI1 4243 aa0.42□□□□□ -2.34
HMGB3P31-201ENST00000413333 DEFB106AQ8N104 65 aa0.42□□□□□ -2.34
HMGB3P31-201ENST00000413333 TOMM5Q8N4H5 51 aa0.42□□□□□ -2.34
HMGB3P31-201ENST00000413333 ANK3Q12955 4377 aaKnown RBP0.42□□□□□ -2.34
HMGB3P31-201ENST00000413333 ATP7AQ04656 1500 aa0.4□□□□□ -2.35
HMGB3P31-201ENST00000413333 H3BUA1 57 aa0.4□□□□□ -2.35
HMGB3P31-201ENST00000413333 PLECQ15149 4684 aaKnown RBP0.4□□□□□ -2.35
HMGB3P31-201ENST00000413333 STARD9Q9P2P6 4700 aa0.39□□□□□ -2.35
HMGB3P31-201ENST00000413333 DNAH6Q9C0G6 4158 aa0.39□□□□□ -2.35
HMGB3P31-201ENST00000413333 H0YGG7 62 aa0.39□□□□□ -2.35
HMGB3P31-201ENST00000413333 SPRR2DP22532 72 aa0.39□□□□□ -2.35
HMGB3P31-201ENST00000413333 KRTAP19-6Q3LI70 58 aa0.39□□□□□ -2.35
HMGB3P31-201ENST00000413333 DNAH11Q96DT5 4516 aa0.38□□□□□ -2.35
HMGB3P31-201ENST00000413333 TFF3Q07654 80 aa0.38□□□□□ -2.35
HMGB3P31-201ENST00000413333 FAT1Q14517 4588 aa0.38□□□□□ -2.35
HMGB3P31-201ENST00000413333 DNAH10Q8IVF4 4471 aa0.38□□□□□ -2.35
HMGB3P31-201ENST00000413333 DNAH5Q8TE73 4624 aa0.38□□□□□ -2.35
HMGB3P31-201ENST00000413333 CLTCL1P53675 1640 aa0.38□□□□□ -2.35
HMGB3P31-201ENST00000413333 MROH2BQ7Z745 1585 aa0.37□□□□□ -2.35
HMGB3P31-201ENST00000413333 SAMD9LQ8IVG5 1584 aa0.37□□□□□ -2.35
HMGB3P31-201ENST00000413333 APOBP04114 4563 aaKnown RBP0.37□□□□□ -2.35
HMGB3P31-201ENST00000413333 TIMM8BQ9Y5J9 83 aaPredicted RBP0.37□□□□□ -2.35
HMGB3P31-201ENST00000413333 SPRR2EP22531 72 aa0.35□□□□□ -2.35
HMGB3P31-201ENST00000413333 SPRR2BP35325 72 aa0.35□□□□□ -2.35
HMGB3P31-201ENST00000413333 SPRR2AP35326 72 aa0.35□□□□□ -2.35
HMGB3P31-201ENST00000413333 MT4P47944 62 aa0.35□□□□□ -2.35
HMGB3P31-201ENST00000413333 SMIM2Q9BVW6 85 aa0.35□□□□□ -2.35
HMGB3P31-201ENST00000413333 IGLV5-48A0A075B6I7 105 aa0.34□□□□□ -2.36
HMGB3P31-201ENST00000413333 WFDC10BQ8IUB3 73 aa0.34□□□□□ -2.36
HMGB3P31-201ENST00000413333 KAAG1Q9UBP8 84 aa0.34□□□□□ -2.36
HMGB3P31-201ENST00000413333 TRPM2O94759 1503 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms