RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 KRTAP13-4Q3LI77 160 aa9.02□□□□□ -0.97
SDCBP-202ENST00000413219 S4R3F8 94 aa9□□□□□ -0.97
SDCBP-202ENST00000413219 FAT3Q8TDW7 4589 aa8.96□□□□□ -0.97
SDCBP-202ENST00000413219 KRTAP10-8P60410 259 aa8.96□□□□□ -0.98
SDCBP-202ENST00000413219 A0A0D9SG42 100 aa8.93□□□□□ -0.98
SDCBP-202ENST00000413219 XP32Q5T750 250 aa8.91□□□□□ -0.98
SDCBP-202ENST00000413219 TNXBP22105 4242 aa8.89□□□□□ -0.99
SDCBP-202ENST00000413219 KRTAP21-3Q3LHN1 58 aa8.87□□□□□ -0.99
SDCBP-202ENST00000413219 TPRXLQ17RH7 258 aa8.87□□□□□ -0.99
SDCBP-202ENST00000413219 P0C880 135 aa8.86□□□□□ -0.99
SDCBP-202ENST00000413219 LRP1Q07954 4544 aaKnown RBP8.85□□□□□ -0.99
SDCBP-202ENST00000413219 DMBT1Q9UGM3 2413 aaPredicted RBP8.83□□□□□ -1
SDCBP-202ENST00000413219 HSPG2P98160 4391 aa8.79□□□□□ -1
SDCBP-202ENST00000413219 KRTAP12-2P59991 146 aa8.76□□□□□ -1.01
SDCBP-202ENST00000413219 SPINT4Q6UDR6 99 aa8.74□□□□□ -1.01
SDCBP-202ENST00000413219 Q5VSD8 79 aa8.73□□□□□ -1.01
SDCBP-202ENST00000413219 KRTAP12-1P59990 96 aa8.71□□□□□ -1.01
SDCBP-202ENST00000413219 C10orf95Q9H7T3 257 aa8.71□□□□□ -1.01
SDCBP-202ENST00000413219 RYR2Q92736 4967 aa8.7□□□□□ -1.02
SDCBP-202ENST00000413219 M0QZ58 72 aa8.68□□□□□ -1.02
SDCBP-202ENST00000413219 KRTAP15-1Q3LI76 137 aa8.61□□□□□ -1.03
SDCBP-202ENST00000413219 MT1HL1P0DM35 61 aa8.57□□□□□ -1.04
SDCBP-202ENST00000413219 MYCBP2O75592 4640 aa8.54□□□□□ -1.04
SDCBP-202ENST00000413219 KRTAP17-1Q9BYP8 105 aa8.44□□□□□ -1.06
SDCBP-202ENST00000413219 RYR1P21817 5038 aa8.43□□□□□ -1.06
SDCBP-202ENST00000413219 KMT2CQ8NEZ4 4911 aaKnown RBP8.42□□□□□ -1.06
SDCBP-202ENST00000413219 NDUFAF8A1L188 74 aa8.42□□□□□ -1.06
SDCBP-202ENST00000413219 R4GN34 69 aa8.34□□□□□ -1.07
SDCBP-202ENST00000413219 LPAP08519 4548 aa8.33□□□□□ -1.08
SDCBP-202ENST00000413219 LRP2P98164 4655 aa8.3□□□□□ -1.08
SDCBP-202ENST00000413219 SEC61BP60468 96 aaKnown RBP8.18□□□□□ -1.1
SDCBP-202ENST00000413219 RYR3Q15413 4870 aa8.18□□□□□ -1.1
SDCBP-202ENST00000413219 KIAA1109Q2LD37 5005 aa8.16□□□□□ -1.1
SDCBP-202ENST00000413219 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
SDCBP-202ENST00000413219 PLAC4Q8WY50 150 aa8.12□□□□□ -1.11
SDCBP-202ENST00000413219 PP632Q6XCG6 107 aa8.06□□□□□ -1.12
SDCBP-202ENST00000413219 MUC17Q685J3 4493 aa8.05□□□□□ -1.12
SDCBP-202ENST00000413219 KRTAP4-1Q9BYQ7 146 aa8□□□□□ -1.13
SDCBP-202ENST00000413219 KRTAP19-2Q3LHN2 52 aa7.96□□□□□ -1.13
SDCBP-202ENST00000413219 CAMK2N1Q7Z7J9 78 aa7.94□□□□□ -1.14
SDCBP-202ENST00000413219 ABCA13Q86UQ4 5058 aa7.92□□□□□ -1.14
SDCBP-202ENST00000413219 KRTAP4-5Q9BYR2 181 aa7.91□□□□□ -1.14
SDCBP-202ENST00000413219 LUZP6Q538Z0 58 aa7.81□□□□□ -1.16
SDCBP-202ENST00000413219 EPPK1P58107 5090 aaKnown RBP7.8□□□□□ -1.16
SDCBP-202ENST00000413219 KRTAP23-1A1A580 65 aa7.77□□□□□ -1.17
SDCBP-202ENST00000413219 J3QL48 77 aa7.77□□□□□ -1.17
SDCBP-202ENST00000413219 TNP1P09430 55 aa7.72□□□□□ -1.17
SDCBP-202ENST00000413219 FLGP20930 4061 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-202ENST00000413219 HERC1Q15751 4861 aa7.61□□□□□ -1.19
SDCBP-202ENST00000413219 A0A0A0MQY5 61 aa7.59□□□□□ -1.19
SDCBP-202ENST00000413219 SPRR5A0A1B0GTR4 108 aa7.59□□□□□ -1.19
SDCBP-202ENST00000413219 BIRC6Q9NR09 4857 aa7.51□□□□□ -1.21
SDCBP-202ENST00000413219 HERC2O95714 4834 aa7.47□□□□□ -1.21
SDCBP-202ENST00000413219 SPRR2GQ9BYE4 73 aa7.45□□□□□ -1.22
SDCBP-202ENST00000413219 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
SDCBP-202ENST00000413219 KRTAP19-1Q8IUB9 90 aa7.35□□□□□ -1.23
SDCBP-202ENST00000413219 MUC2Q02817 5179 aa7.33□□□□□ -1.24
SDCBP-202ENST00000413219 PCLOQ9Y6V0 5065 aa7.26□□□□□ -1.25
SDCBP-202ENST00000413219 LCE3AQ5TA76 89 aa7.24□□□□□ -1.25
SDCBP-202ENST00000413219 M0R2T5 61 aa7.15□□□□□ -1.26
SDCBP-202ENST00000413219 HMCN2Q8NDA2 5059 aa7.14□□□□□ -1.27
SDCBP-202ENST00000413219 MT1HP80294 61 aa7.13□□□□□ -1.27
SDCBP-202ENST00000413219 KRTAP8-1Q8IUC2 63 aa7.13□□□□□ -1.27
SDCBP-202ENST00000413219 MT2AP02795 61 aa7.1□□□□□ -1.27
SDCBP-202ENST00000413219 MT1FP04733 61 aa7.09□□□□□ -1.27
SDCBP-202ENST00000413219 KRTAP19-8Q3LI54 63 aa7.09□□□□□ -1.27
SDCBP-202ENST00000413219 KRTAP10-10P60014 251 aa7.08□□□□□ -1.28
SDCBP-202ENST00000413219 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
SDCBP-202ENST00000413219 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
SDCBP-202ENST00000413219 KRTAP10-5P60370 271 aa6.96□□□□□ -1.29
SDCBP-202ENST00000413219 MT1XP80297 61 aa6.94□□□□□ -1.3
SDCBP-202ENST00000413219 MT1BP07438 61 aa6.94□□□□□ -1.3
SDCBP-202ENST00000413219 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
SDCBP-202ENST00000413219 KRTAP12-3P60328 96 aa6.9□□□□□ -1.3
SDCBP-202ENST00000413219 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
SDCBP-202ENST00000413219 INE1O15225 51 aa6.89□□□□□ -1.31
SDCBP-202ENST00000413219 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
SDCBP-202ENST00000413219 UBR4Q5T4S7 5183 aa6.81□□□□□ -1.32
SDCBP-202ENST00000413219 KRTAP10-7P60409 375 aaPredicted RBP6.73□□□□□ -1.33
SDCBP-202ENST00000413219 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
SDCBP-202ENST00000413219 LCE3CQ5T5A8 94 aa6.53□□□□□ -1.36
SDCBP-202ENST00000413219 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
SDCBP-202ENST00000413219 LCE2BO14633 110 aa6.38□□□□□ -1.39
SDCBP-202ENST00000413219 KRTAP9-6A8MVA2 160 aa6.26□□□□□ -1.41
SDCBP-202ENST00000413219 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
SDCBP-202ENST00000413219 KRTAP4-8A0A0G2JLE6 195 aa6.22□□□□□ -1.41
SDCBP-202ENST00000413219 KRTAP4-8Q9BYQ9 185 aa6.22□□□□□ -1.41
SDCBP-202ENST00000413219 KRTAP2-3P0C7H8 128 aa6.21□□□□□ -1.42
SDCBP-202ENST00000413219 KRTAP2-4Q9BYR9 128 aa6.21□□□□□ -1.42
SDCBP-202ENST00000413219 KRTAP2-1Q9BYU5 128 aa6.21□□□□□ -1.42
SDCBP-202ENST00000413219 KRTAP19-7Q3SYF9 63 aa6.18□□□□□ -1.42
SDCBP-202ENST00000413219 LCE2AQ5TA79 106 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-202ENST00000413219 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
SDCBP-202ENST00000413219 MT1LQ93083 61 aa6.04□□□□□ -1.44
SDCBP-202ENST00000413219 KMT2DO14686 5537 aa6.04□□□□□ -1.44
SDCBP-202ENST00000413219 MT1EP04732 61 aa6□□□□□ -1.45
SDCBP-202ENST00000413219 USH2AO75445 5202 aa5.97□□□□□ -1.45
SDCBP-202ENST00000413219 SSPOA2VEC9 5147 aa5.72□□□□□ -1.49
SDCBP-202ENST00000413219 KRTAP19-6Q3LI70 58 aa5.7□□□□□ -1.5
SDCBP-202ENST00000413219 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms