RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 LINC01554Q52M75 96 aa0.93□□□□□ -2.26
RNU6-1140P-201ENST00000410517 BVES-AS1Q5T3Y7 98 aa0.93□□□□□ -2.26
RNU6-1140P-201ENST00000410517 LCA10Q71F78 164 aa0.93□□□□□ -2.26
RNU6-1140P-201ENST00000410517 DEFB105AQ8NG35 78 aa0.93□□□□□ -2.26
RNU6-1140P-201ENST00000410517 SNHG12Q9BXW3 62 aa0.93□□□□□ -2.26
RNU6-1140P-201ENST00000410517 J3KT08 172 aa0.92□□□□□ -2.26
RNU6-1140P-201ENST00000410517 K7EQZ3 153 aa0.92□□□□□ -2.26
RNU6-1140P-201ENST00000410517 SOSTDC1Q6X4U4 206 aa0.92□□□□□ -2.26
RNU6-1140P-201ENST00000410517 TMEM254Q8TBM7 123 aa0.92□□□□□ -2.26
RNU6-1140P-201ENST00000410517 RAB37Q96AX2 223 aa0.92□□□□□ -2.26
RNU6-1140P-201ENST00000410517 IFI27L1Q96BM0 104 aa0.92□□□□□ -2.26
RNU6-1140P-201ENST00000410517 HSPB8Q9UJY1 196 aa0.92□□□□□ -2.26
RNU6-1140P-201ENST00000410517 TRBV7-4A0A0J9YYF1 115 aa0.91□□□□□ -2.26
RNU6-1140P-201ENST00000410517 FAM236AA0A1B0GUQ0 79 aa0.91□□□□□ -2.26
RNU6-1140P-201ENST00000410517 FAM236BA0A1B0GV22 79 aa0.91□□□□□ -2.26
RNU6-1140P-201ENST00000410517 hADV29S1A0JD25 119 aa0.91□□□□□ -2.26
RNU6-1140P-201ENST00000410517 NDUFB1O75438 58 aa0.91□□□□□ -2.26
RNU6-1140P-201ENST00000410517 DPM2O94777 84 aa0.91□□□□□ -2.26
RNU6-1140P-201ENST00000410517 SPINK7P58062 85 aa0.91□□□□□ -2.26
RNU6-1140P-201ENST00000410517 H1FX-AS1Q4G0G2 97 aa0.91□□□□□ -2.26
RNU6-1140P-201ENST00000410517 LINC01545Q5VT33 79 aa0.91□□□□□ -2.26
RNU6-1140P-201ENST00000410517 PRR15Q8IV56 129 aa0.91□□□□□ -2.26
RNU6-1140P-201ENST00000410517 LINC00308Q8TCZ7 52 aa0.91□□□□□ -2.26
RNU6-1140P-201ENST00000410517 A0A1B0GX51 115 aa0.9□□□□□ -2.27
RNU6-1140P-201ENST00000410517 H0YGX0 51 aa0.9□□□□□ -2.27
RNU6-1140P-201ENST00000410517 LEPROTL1O95214 131 aa0.9□□□□□ -2.27
RNU6-1140P-201ENST00000410517 IGKCP01834 107 aa0.9□□□□□ -2.27
RNU6-1140P-201ENST00000410517 SPRR2EP22531 72 aa0.9□□□□□ -2.27
RNU6-1140P-201ENST00000410517 SPRR2BP35325 72 aa0.9□□□□□ -2.27
RNU6-1140P-201ENST00000410517 SPRR2AP35326 72 aa0.9□□□□□ -2.27
RNU6-1140P-201ENST00000410517 LOC110117498A0A087WWA1 95 aa0.89□□□□□ -2.27
RNU6-1140P-201ENST00000410517 SPRR2DP22532 72 aa0.89□□□□□ -2.27
RNU6-1140P-201ENST00000410517 CSAG1Q6PB30 78 aa0.89□□□□□ -2.27
RNU6-1140P-201ENST00000410517 LINC00575Q6W349 94 aa0.89□□□□□ -2.27
RNU6-1140P-201ENST00000410517 Q6ZQY7 126 aa0.89□□□□□ -2.27
RNU6-1140P-201ENST00000410517 C18orf32Q8TCD1 76 aa0.89□□□□□ -2.27
RNU6-1140P-201ENST00000410517 SPRR2FQ96RM1 72 aa0.89□□□□□ -2.27
RNU6-1140P-201ENST00000410517 SPRR2GQ9BYE4 73 aa0.89□□□□□ -2.27
RNU6-1140P-201ENST00000410517 A0A087WSZ3 146 aa0.88□□□□□ -2.27
RNU6-1140P-201ENST00000410517 KRTAP19-8Q3LI54 63 aa0.88□□□□□ -2.27
RNU6-1140P-201ENST00000410517 KRTAP8-1Q8IUC2 63 aa0.88□□□□□ -2.27
RNU6-1140P-201ENST00000410517 H3BMG7 143 aa0.87□□□□□ -2.27
RNU6-1140P-201ENST00000410517 TMEM256-PLSCR3K7ERE1 68 aa0.87□□□□□ -2.27
RNU6-1140P-201ENST00000410517 TAX1BP3O14907 124 aa0.87□□□□□ -2.27
RNU6-1140P-201ENST00000410517 DNAL4O96015 105 aa0.87□□□□□ -2.27
RNU6-1140P-201ENST00000410517 TRACP01848 142 aa0.87□□□□□ -2.27
RNU6-1140P-201ENST00000410517 KLKP1Q107X0 134 aa0.87□□□□□ -2.27
RNU6-1140P-201ENST00000410517 C20orf197Q8N268 126 aa0.87□□□□□ -2.27
RNU6-1140P-201ENST00000410517 PLAC4Q8WY50 150 aa0.87□□□□□ -2.27
RNU6-1140P-201ENST00000410517 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
RNU6-1140P-201ENST00000410517 TMEM218A2RU14 115 aa0.86□□□□□ -2.27
RNU6-1140P-201ENST00000410517 INE1O15225 51 aa0.86□□□□□ -2.27
RNU6-1140P-201ENST00000410517 PDE6GP18545 87 aa0.86□□□□□ -2.27
RNU6-1140P-201ENST00000410517 SVBPQ8N300 66 aa0.86□□□□□ -2.27
RNU6-1140P-201ENST00000410517 SMIM11BQ8TCY0 68 aa0.86□□□□□ -2.27
RNU6-1140P-201ENST00000410517 ORMDL1Q9P0S3 153 aa0.86□□□□□ -2.27
RNU6-1140P-201ENST00000410517 H0YAA0 97 aa0.85□□□□□ -2.27
RNU6-1140P-201ENST00000410517 COX6CP09669 75 aa0.85□□□□□ -2.27
RNU6-1140P-201ENST00000410517 FABP4P15090 132 aa0.85□□□□□ -2.27
RNU6-1140P-201ENST00000410517 NPC2P61916 151 aa0.85□□□□□ -2.27
RNU6-1140P-201ENST00000410517 PMCHL1Q16048 86 aa0.85□□□□□ -2.27
RNU6-1140P-201ENST00000410517 LINC00472Q9H8W2 130 aa0.85□□□□□ -2.27
RNU6-1140P-201ENST00000410517 hDV103S1A0JD37 113 aa0.84□□□□□ -2.27
RNU6-1140P-201ENST00000410517 SYS1-DBNDD2H3BUS1 97 aa0.84□□□□□ -2.27
RNU6-1140P-201ENST00000410517 H3BUT2 72 aa0.84□□□□□ -2.27
RNU6-1140P-201ENST00000410517 CCKP06307 115 aa0.84□□□□□ -2.27
RNU6-1140P-201ENST00000410517 MT1BP07438 61 aa0.84□□□□□ -2.27
RNU6-1140P-201ENST00000410517 FABP2P12104 132 aa0.84□□□□□ -2.27
RNU6-1140P-201ENST00000410517 RBM3P98179 157 aaKnown RBP0.84□□□□□ -2.27
RNU6-1140P-201ENST00000410517 CLLU1Q5K131 121 aa0.84□□□□□ -2.27
RNU6-1140P-201ENST00000410517 MUSTN1Q8IVN3 82 aa0.84□□□□□ -2.27
RNU6-1140P-201ENST00000410517 S4R3F8 94 aa0.84□□□□□ -2.27
RNU6-1140P-201ENST00000410517 C9JAW5 83 aa0.83□□□□□ -2.28
RNU6-1140P-201ENST00000410517 JMJD7-PLA2G4BH0Y9G9 81 aa0.83□□□□□ -2.28
RNU6-1140P-201ENST00000410517 MRPL34Q9BQ48 92 aaKnown RBP0.83□□□□□ -2.28
RNU6-1140P-201ENST00000410517 CDC42SE1Q9NRR8 79 aa0.83□□□□□ -2.28
RNU6-1140P-201ENST00000410517 TP53AIP1Q9HCN2 124 aa0.82□□□□□ -2.28
RNU6-1140P-201ENST00000410517 HCG22E2RYF7 251 aa0.81□□□□□ -2.28
RNU6-1140P-201ENST00000410517 F8W1H4 67 aa0.81□□□□□ -2.28
RNU6-1140P-201ENST00000410517 NDUFC1O43677 76 aa0.81□□□□□ -2.28
RNU6-1140P-201ENST00000410517 HIST1H2BKO60814 126 aa0.81□□□□□ -2.28
RNU6-1140P-201ENST00000410517 HIST1H2BJP06899 126 aa0.81□□□□□ -2.28
RNU6-1140P-201ENST00000410517 COX7CP15954 63 aa0.81□□□□□ -2.28
RNU6-1140P-201ENST00000410517 KRTDAPP60985 99 aa0.81□□□□□ -2.28
RNU6-1140P-201ENST00000410517 AHNAKQ09666 5890 aaKnown RBP0.81□□□□□ -2.28
RNU6-1140P-201ENST00000410517 DLEU1O43261 78 aa0.8□□□□□ -2.28
RNU6-1140P-201ENST00000410517 APOC3P02656 99 aa0.8□□□□□ -2.28
RNU6-1140P-201ENST00000410517 NREPQ16612 68 aa0.8□□□□□ -2.28
RNU6-1140P-201ENST00000410517 VPS25Q9BRG1 176 aa0.8□□□□□ -2.28
RNU6-1140P-201ENST00000410517 VAMP8Q9BV40 100 aa0.8□□□□□ -2.28
RNU6-1140P-201ENST00000410517 PRO1854Q9UHT4 67 aa0.8□□□□□ -2.28
RNU6-1140P-201ENST00000410517 A0A1W2PPM0 123 aa0.79□□□□□ -2.28
RNU6-1140P-201ENST00000410517 TSTD3H0UI37 97 aa0.79□□□□□ -2.28
RNU6-1140P-201ENST00000410517 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
RNU6-1140P-201ENST00000410517 PMCHL2Q9BQD1 86 aa0.79□□□□□ -2.28
RNU6-1140P-201ENST00000410517 ACYP1P07311 99 aa0.78□□□□□ -2.28
RNU6-1140P-201ENST00000410517 ROMO1P60602 79 aa0.78□□□□□ -2.28
RNU6-1140P-201ENST00000410517 CASC2Q6XLA1 102 aa0.78□□□□□ -2.28
RNU6-1140P-201ENST00000410517 HIGD1BQ9P298 99 aa0.78□□□□□ -2.28
RNU6-1140P-201ENST00000410517 MMP24-AS1A0A0U1RRL7 71 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms