RNA–Protein interactions for RNA: ENST00000409855.5

SCN7A-201, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN7A, Length 7,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-201ENST00000409855 DNAH6Q9C0G6 4158 aa1.21□□□□□ -2.22
SCN7A-201ENST00000409855 NBEAL2Q6ZNJ1 2754 aa1.21□□□□□ -2.22
SCN7A-201ENST00000409855 KRTAP1-5Q9BYS1 174 aa1.21□□□□□ -2.22
SCN7A-201ENST00000409855 A8MU10 97 aa1.21□□□□□ -2.22
SCN7A-201ENST00000409855 KTN1-AS1Q86SY8 53 aa1.21□□□□□ -2.22
SCN7A-201ENST00000409855 XP32Q5T750 250 aa1.21□□□□□ -2.22
SCN7A-201ENST00000409855 CR1P17927 2039 aa1.21□□□□□ -2.22
SCN7A-201ENST00000409855 LINC01558Q9Y6Z2 57 aa1.2□□□□□ -2.22
SCN7A-201ENST00000409855 PP632Q6XCG6 107 aa1.2□□□□□ -2.22
SCN7A-201ENST00000409855 A0A0A0MQY5 61 aa1.2□□□□□ -2.22
SCN7A-201ENST00000409855 A0A0D9SG42 100 aa1.2□□□□□ -2.22
SCN7A-201ENST00000409855 LORP23490 312 aaPredicted RBP1.2□□□□□ -2.22
SCN7A-201ENST00000409855 PRO0461Q9UI25 63 aa1.2□□□□□ -2.22
SCN7A-201ENST00000409855 TNP1P09430 55 aa1.2□□□□□ -2.22
SCN7A-201ENST00000409855 ADM2Q7Z4H4 148 aa1.2□□□□□ -2.22
SCN7A-201ENST00000409855 HSPG2P98160 4391 aa1.2□□□□□ -2.22
SCN7A-201ENST00000409855 DNAH11Q96DT5 4516 aa1.2□□□□□ -2.22
SCN7A-201ENST00000409855 A8MUU9 505 aa1.19□□□□□ -2.22
SCN7A-201ENST00000409855 C4orf26Q17RF5 130 aa1.19□□□□□ -2.22
SCN7A-201ENST00000409855 PLECQ15149 4684 aaKnown RBP1.19□□□□□ -2.22
SCN7A-201ENST00000409855 LCE2BO14633 110 aa1.19□□□□□ -2.22
SCN7A-201ENST00000409855 ROMO1P60602 79 aa1.19□□□□□ -2.22
SCN7A-201ENST00000409855 A0A1B0GVY2 172 aa1.19□□□□□ -2.22
SCN7A-201ENST00000409855 KRTAP13-1Q8IUC0 172 aa1.18□□□□□ -2.22
SCN7A-201ENST00000409855 KRTAP4-16G5E9R7 235 aaPredicted RBP1.18□□□□□ -2.22
SCN7A-201ENST00000409855 P0C880 135 aa1.18□□□□□ -2.22
SCN7A-201ENST00000409855 Q5VV11 94 aa1.18□□□□□ -2.22
SCN7A-201ENST00000409855 Q8N9P0 234 aaPredicted RBP1.18□□□□□ -2.22
SCN7A-201ENST00000409855 LRP2P98164 4655 aa1.18□□□□□ -2.22
SCN7A-201ENST00000409855 OCR1Q9BZK8 76 aa1.17□□□□□ -2.22
SCN7A-201ENST00000409855 Q8NDZ9 215 aa1.17□□□□□ -2.22
SCN7A-201ENST00000409855 A0A087X002 238 aa1.17□□□□□ -2.22
SCN7A-201ENST00000409855 A0A0G2JQZ4 141 aa1.17□□□□□ -2.22
SCN7A-201ENST00000409855 KRTAP13-2Q52LG2 175 aa1.16□□□□□ -2.22
SCN7A-201ENST00000409855 PKHD1P08F94 4074 aa1.15□□□□□ -2.22
SCN7A-201ENST00000409855 KRTAP25-1Q3LHN0 102 aa1.15□□□□□ -2.23
SCN7A-201ENST00000409855 KRTAP10-10P60014 251 aa1.14□□□□□ -2.23
SCN7A-201ENST00000409855 KRTAP5-9P26371 169 aa1.14□□□□□ -2.23
SCN7A-201ENST00000409855 KRTAP13-3Q3SY46 172 aa1.14□□□□□ -2.23
SCN7A-201ENST00000409855 SRRM2Q9UQ35 2752 aaKnown RBP1.14□□□□□ -2.23
SCN7A-201ENST00000409855 KRTAP10-8P60410 259 aa1.14□□□□□ -2.23
SCN7A-201ENST00000409855 PKHD1L1Q86WI1 4243 aa1.14□□□□□ -2.23
SCN7A-201ENST00000409855 VPS13DQ5THJ4 4388 aa1.13□□□□□ -2.23
SCN7A-201ENST00000409855 DYNC1H1Q14204 4646 aaKnown RBP1.13□□□□□ -2.23
SCN7A-201ENST00000409855 H0YAA0 97 aa1.12□□□□□ -2.23
SCN7A-201ENST00000409855 KRTAP1-4P0C5Y4 121 aa1.12□□□□□ -2.23
SCN7A-201ENST00000409855 KRTAP5-3Q6L8H2 238 aa1.12□□□□□ -2.23
SCN7A-201ENST00000409855 STARD9Q9P2P6 4700 aa1.12□□□□□ -2.23
SCN7A-201ENST00000409855 LCE2CQ5TA81 110 aa1.12□□□□□ -2.23
SCN7A-201ENST00000409855 CYSTM1Q9H1C7 97 aa1.11□□□□□ -2.23
SCN7A-201ENST00000409855 SPATA8Q6RVD6 105 aa1.11□□□□□ -2.23
SCN7A-201ENST00000409855 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
SCN7A-201ENST00000409855 APOBP04114 4563 aaKnown RBP1.1□□□□□ -2.23
SCN7A-201ENST00000409855 A6NN06 94 aa1.09□□□□□ -2.23
SCN7A-201ENST00000409855 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.09□□□□□ -2.23
SCN7A-201ENST00000409855 KRTAP4-2Q9BYR5 136 aa1.09□□□□□ -2.24
SCN7A-201ENST00000409855 KRTAP9-8Q9BYQ0 159 aa1.09□□□□□ -2.24
SCN7A-201ENST00000409855 DNAH10Q8IVF4 4471 aa1.07□□□□□ -2.24
SCN7A-201ENST00000409855 KRTAP19-4Q3LI73 84 aa1.07□□□□□ -2.24
SCN7A-201ENST00000409855 KRTAP5-5Q701N2 237 aaPredicted RBP1.07□□□□□ -2.24
SCN7A-201ENST00000409855 LRP1BQ9NZR2 4599 aa1.07□□□□□ -2.24
SCN7A-201ENST00000409855 C10orf95Q9H7T3 257 aa1.07□□□□□ -2.24
SCN7A-201ENST00000409855 KRTAP7-1Q8IUC3 87 aa1.07□□□□□ -2.24
SCN7A-201ENST00000409855 KRTAP4-8Q9BYQ9 185 aa1.06□□□□□ -2.24
SCN7A-201ENST00000409855 KRTAP11-1Q8IUC1 163 aa1.06□□□□□ -2.24
SCN7A-201ENST00000409855 KRTAP16-1A8MUX0 517 aa1.05□□□□□ -2.24
SCN7A-201ENST00000409855 DNAH5Q8TE73 4624 aa1.04□□□□□ -2.24
SCN7A-201ENST00000409855 LRP1Q07954 4544 aaKnown RBP1.03□□□□□ -2.24
SCN7A-201ENST00000409855 MUC12Q9UKN1 5478 aa1.03□□□□□ -2.24
SCN7A-201ENST00000409855 NDUFAF8A1L188 74 aa1.03□□□□□ -2.24
SCN7A-201ENST00000409855 KRTAP5-8O75690 187 aa1.03□□□□□ -2.25
SCN7A-201ENST00000409855 TNXBP22105 4242 aa1.02□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP23-1A1A580 65 aa1.02□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP13-4Q3LI77 160 aa1.02□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP4-12Q9BQ66 201 aa1.02□□□□□ -2.25
SCN7A-201ENST00000409855 H3BS24 57 aa1.01□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP9-2Q9BYQ4 174 aa1.01□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP9-9Q9BYP9 154 aa1.01□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP9-4Q9BYQ2 154 aa1.01□□□□□ -2.25
SCN7A-201ENST00000409855 DNAH8Q96JB1 4490 aa1□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP4-8A0A0G2JLE6 195 aa1□□□□□ -2.25
SCN7A-201ENST00000409855 FLGP20930 4061 aaPredicted RBP1□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP5-4Q6L8H1 288 aa1□□□□□ -2.25
SCN7A-201ENST00000409855 MT1HL1P0DM35 61 aa1□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP10-7P60409 375 aaPredicted RBP0.98□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP4-7Q9BYR0 210 aa0.98□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP15-1Q3LI76 137 aa0.97□□□□□ -2.25
SCN7A-201ENST00000409855 FAT1Q14517 4588 aa0.97□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP10-12P60413 245 aa0.97□□□□□ -2.25
SCN7A-201ENST00000409855 KRTAP8-1Q8IUC2 63 aa0.96□□□□□ -2.26
SCN7A-201ENST00000409855 PRAC1Q96KF2 57 aa0.96□□□□□ -2.26
SCN7A-201ENST00000409855 KRTAP12-2P59991 146 aa0.95□□□□□ -2.26
SCN7A-201ENST00000409855 OBSCNQ5VST9 7968 aa0.95□□□□□ -2.26
SCN7A-201ENST00000409855 KRTAP10-4P60372 401 aaPredicted RBP0.95□□□□□ -2.26
SCN7A-201ENST00000409855 KRTAP2-2Q9BYT5 123 aa0.94□□□□□ -2.26
SCN7A-201ENST00000409855 INE1O15225 51 aa0.93□□□□□ -2.26
SCN7A-201ENST00000409855 KRTAP10-6P60371 365 aaPredicted RBP0.93□□□□□ -2.26
SCN7A-201ENST00000409855 KRTAP12-1P59990 96 aa0.91□□□□□ -2.26
SCN7A-201ENST00000409855 KRTAP9-6A0A140TA67 174 aa0.91□□□□□ -2.26
SCN7A-201ENST00000409855 KRTAP12-4P60329 112 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms