RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 DYNC1H1Q14204 4646 aaKnown RBP6.8□□□□□ -1.32
TTC7A-204ENST00000409825 VPS13DQ5THJ4 4388 aa6.8□□□□□ -1.32
TTC7A-204ENST00000409825 KRTAP3-3Q9BYR6 98 aa6.75□□□□□ -1.33
TTC7A-204ENST00000409825 RYR1P21817 5038 aa6.73□□□□□ -1.33
TTC7A-204ENST00000409825 PRKDCP78527 4128 aaKnown RBP6.71□□□□□ -1.34
TTC7A-204ENST00000409825 ANK2Q01484 3957 aa6.69□□□□□ -1.34
TTC7A-204ENST00000409825 LRP1BQ9NZR2 4599 aa6.69□□□□□ -1.34
TTC7A-204ENST00000409825 STARD9Q9P2P6 4700 aa6.68□□□□□ -1.34
TTC7A-204ENST00000409825 DNAH17Q9UFH2 4485 aa6.65□□□□□ -1.34
TTC7A-204ENST00000409825 KRTAP3-2Q9BYR7 98 aa6.65□□□□□ -1.34
TTC7A-204ENST00000409825 FAT1Q14517 4588 aa6.62□□□□□ -1.35
TTC7A-204ENST00000409825 KIAA1109Q2LD37 5005 aa6.62□□□□□ -1.35
TTC7A-204ENST00000409825 NDUFAF8A1L188 74 aa6.6□□□□□ -1.35
TTC7A-204ENST00000409825 KRTAP4-1Q9BYQ7 146 aa6.6□□□□□ -1.35
TTC7A-204ENST00000409825 MT1HP80294 61 aa6.58□□□□□ -1.36
TTC7A-204ENST00000409825 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
TTC7A-204ENST00000409825 FAT2Q9NYQ8 4349 aa6.55□□□□□ -1.36
TTC7A-204ENST00000409825 CSMD3Q7Z407 3707 aa6.55□□□□□ -1.36
TTC7A-204ENST00000409825 RYR3Q15413 4870 aa6.54□□□□□ -1.36
TTC7A-204ENST00000409825 DYNC2H1Q8NCM8 4307 aaKnown RBP6.52□□□□□ -1.37
TTC7A-204ENST00000409825 KRTAP15-1Q3LI76 137 aa6.51□□□□□ -1.37
TTC7A-204ENST00000409825 SACSQ9NZJ4 4579 aa6.48□□□□□ -1.37
TTC7A-204ENST00000409825 BIRC6Q9NR09 4857 aa6.48□□□□□ -1.37
TTC7A-204ENST00000409825 DNAH2Q9P225 4427 aa6.46□□□□□ -1.38
TTC7A-204ENST00000409825 MT2AP02795 61 aa6.42□□□□□ -1.38
TTC7A-204ENST00000409825 KRTAP17-1Q9BYP8 105 aa6.41□□□□□ -1.38
TTC7A-204ENST00000409825 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
TTC7A-204ENST00000409825 RYR2Q92736 4967 aa6.37□□□□□ -1.39
TTC7A-204ENST00000409825 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
TTC7A-204ENST00000409825 HERC2O95714 4834 aa6.32□□□□□ -1.4
TTC7A-204ENST00000409825 DNAH3Q8TD57 4116 aa6.3□□□□□ -1.4
TTC7A-204ENST00000409825 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
TTC7A-204ENST00000409825 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
TTC7A-204ENST00000409825 MT1FP04733 61 aa6.26□□□□□ -1.41
TTC7A-204ENST00000409825 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
TTC7A-204ENST00000409825 KMT2AQ03164 3969 aa6.25□□□□□ -1.41
TTC7A-204ENST00000409825 DNAH6Q9C0G6 4158 aa6.25□□□□□ -1.41
TTC7A-204ENST00000409825 CMYA5Q8N3K9 4069 aa6.24□□□□□ -1.41
TTC7A-204ENST00000409825 APOBP04114 4563 aaKnown RBP6.24□□□□□ -1.41
TTC7A-204ENST00000409825 DNAH8Q96JB1 4490 aa6.24□□□□□ -1.41
TTC7A-204ENST00000409825 VPS13BQ7Z7G8 4022 aa6.17□□□□□ -1.42
TTC7A-204ENST00000409825 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
TTC7A-204ENST00000409825 LYSTQ99698 3801 aa6.13□□□□□ -1.43
TTC7A-204ENST00000409825 CRCT1Q9UGL9 99 aa6.12□□□□□ -1.43
TTC7A-204ENST00000409825 FAT3Q8TDW7 4589 aa6.12□□□□□ -1.43
TTC7A-204ENST00000409825 LRP1Q07954 4544 aaKnown RBP6.05□□□□□ -1.44
TTC7A-204ENST00000409825 PCLOQ9Y6V0 5065 aa6.03□□□□□ -1.44
TTC7A-204ENST00000409825 MYCBP2O75592 4640 aa6.03□□□□□ -1.44
TTC7A-204ENST00000409825 HYDINQ4G0P3 5121 aa6.02□□□□□ -1.45
TTC7A-204ENST00000409825 HERC1Q15751 4861 aa6□□□□□ -1.45
TTC7A-204ENST00000409825 DNAH7Q8WXX0 4024 aa5.97□□□□□ -1.45
TTC7A-204ENST00000409825 HSPG2P98160 4391 aa5.97□□□□□ -1.45
TTC7A-204ENST00000409825 SPRR2FQ96RM1 72 aa5.97□□□□□ -1.45
TTC7A-204ENST00000409825 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
TTC7A-204ENST00000409825 KMT2CQ8NEZ4 4911 aaKnown RBP5.92□□□□□ -1.46
TTC7A-204ENST00000409825 LCE2CQ5TA81 110 aa5.89□□□□□ -1.47
TTC7A-204ENST00000409825 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
TTC7A-204ENST00000409825 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
TTC7A-204ENST00000409825 PKD1P98161 4303 aa5.83□□□□□ -1.48
TTC7A-204ENST00000409825 FRAS1Q86XX4 4008 aa5.83□□□□□ -1.48
TTC7A-204ENST00000409825 HECTD4Q9Y4D8 3996 aa5.81□□□□□ -1.48
TTC7A-204ENST00000409825 KRTAP10-5P60370 271 aa5.81□□□□□ -1.48
TTC7A-204ENST00000409825 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
TTC7A-204ENST00000409825 LRP2P98164 4655 aa5.79□□□□□ -1.48
TTC7A-204ENST00000409825 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
TTC7A-204ENST00000409825 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
TTC7A-204ENST00000409825 PKHD1P08F94 4074 aa5.75□□□□□ -1.49
TTC7A-204ENST00000409825 KRTAP9-3Q9BYQ3 159 aa5.75□□□□□ -1.49
TTC7A-204ENST00000409825 ABCA13Q86UQ4 5058 aa5.74□□□□□ -1.49
TTC7A-204ENST00000409825 EPPK1P58107 5090 aaKnown RBP5.74□□□□□ -1.49
TTC7A-204ENST00000409825 MT1BP07438 61 aa5.71□□□□□ -1.5
TTC7A-204ENST00000409825 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
TTC7A-204ENST00000409825 SPRR2EP22531 72 aa5.66□□□□□ -1.5
TTC7A-204ENST00000409825 SPRR2BP35325 72 aa5.66□□□□□ -1.5
TTC7A-204ENST00000409825 SPRR2AP35326 72 aa5.66□□□□□ -1.5
TTC7A-204ENST00000409825 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.5
TTC7A-204ENST00000409825 MT1XP80297 61 aa5.62□□□□□ -1.51
TTC7A-204ENST00000409825 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.51
TTC7A-204ENST00000409825 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
TTC7A-204ENST00000409825 INE1O15225 51 aa5.52□□□□□ -1.53
TTC7A-204ENST00000409825 LCE2BO14633 110 aa5.51□□□□□ -1.53
TTC7A-204ENST00000409825 LCE2DQ5TA82 110 aaPredicted RBP5.5□□□□□ -1.53
TTC7A-204ENST00000409825 SPRR2DP22532 72 aa5.5□□□□□ -1.53
TTC7A-204ENST00000409825 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
TTC7A-204ENST00000409825 UBR4Q5T4S7 5183 aa5.48□□□□□ -1.53
TTC7A-204ENST00000409825 LPAP08519 4548 aa5.43□□□□□ -1.54
TTC7A-204ENST00000409825 KRTAP19-6Q3LI70 58 aa5.41□□□□□ -1.54
TTC7A-204ENST00000409825 MT1GP13640 62 aa5.4□□□□□ -1.55
TTC7A-204ENST00000409825 KRTAP9-6A0A140TA67 174 aa5.39□□□□□ -1.55
TTC7A-204ENST00000409825 RNF213Q63HN8 5207 aa5.38□□□□□ -1.55
TTC7A-204ENST00000409825 MUC17Q685J3 4493 aa5.38□□□□□ -1.55
TTC7A-204ENST00000409825 TNXBP22105 4242 aa5.37□□□□□ -1.55
TTC7A-204ENST00000409825 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
TTC7A-204ENST00000409825 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
TTC7A-204ENST00000409825 FAT4Q6V0I7 4981 aa5.34□□□□□ -1.56
TTC7A-204ENST00000409825 FLGP20930 4061 aaPredicted RBP5.29□□□□□ -1.56
TTC7A-204ENST00000409825 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
TTC7A-204ENST00000409825 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
TTC7A-204ENST00000409825 KRTAP19-3Q7Z4W3 81 aa5.22□□□□□ -1.57
TTC7A-204ENST00000409825 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms