RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 AKAP9Q99996 3911 aa3.39□□□□□ -1.87
SH3D19-203ENST00000409598 KRTAP17-1Q9BYP8 105 aa3.38□□□□□ -1.87
SH3D19-203ENST00000409598 DNAH9Q9NYC9 4486 aa3.38□□□□□ -1.87
SH3D19-203ENST00000409598 DNAH10Q8IVF4 4471 aa3.37□□□□□ -1.87
SH3D19-203ENST00000409598 KRTAP8-1Q8IUC2 63 aa3.37□□□□□ -1.87
SH3D19-203ENST00000409598 MT1HP80294 61 aa3.36□□□□□ -1.87
SH3D19-203ENST00000409598 BIRC6Q9NR09 4857 aa3.34□□□□□ -1.87
SH3D19-203ENST00000409598 PLECQ15149 4684 aaKnown RBP3.33□□□□□ -1.88
SH3D19-203ENST00000409598 DNAH5Q8TE73 4624 aa3.33□□□□□ -1.88
SH3D19-203ENST00000409598 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
SH3D19-203ENST00000409598 CSMD3Q7Z407 3707 aa3.26□□□□□ -1.89
SH3D19-203ENST00000409598 DYNC1H1Q14204 4646 aaKnown RBP3.25□□□□□ -1.89
SH3D19-203ENST00000409598 MT2AP02795 61 aa3.23□□□□□ -1.89
SH3D19-203ENST00000409598 RYR1P21817 5038 aa3.23□□□□□ -1.89
SH3D19-203ENST00000409598 KRTAP4-1Q9BYQ7 146 aa3.21□□□□□ -1.9
SH3D19-203ENST00000409598 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
SH3D19-203ENST00000409598 SPRR2FQ96RM1 72 aa3.19□□□□□ -1.9
SH3D19-203ENST00000409598 VPS13DQ5THJ4 4388 aa3.18□□□□□ -1.9
SH3D19-203ENST00000409598 LRP1BQ9NZR2 4599 aa3.18□□□□□ -1.9
SH3D19-203ENST00000409598 DYNC2H1Q8NCM8 4307 aaKnown RBP3.17□□□□□ -1.9
SH3D19-203ENST00000409598 DNAH17Q9UFH2 4485 aa3.15□□□□□ -1.91
SH3D19-203ENST00000409598 HERC2O95714 4834 aa3.15□□□□□ -1.91
SH3D19-203ENST00000409598 RYR3Q15413 4870 aa3.14□□□□□ -1.91
SH3D19-203ENST00000409598 INE1O15225 51 aa3.14□□□□□ -1.91
SH3D19-203ENST00000409598 DNAH2Q9P225 4427 aa3.13□□□□□ -1.91
SH3D19-203ENST00000409598 KRTAP9-6A0A140TA67 174 aa3.13□□□□□ -1.91
SH3D19-203ENST00000409598 KRTAP9-2Q9BYQ4 174 aa3.13□□□□□ -1.91
SH3D19-203ENST00000409598 ANK2Q01484 3957 aa3.13□□□□□ -1.91
SH3D19-203ENST00000409598 HERC1Q15751 4861 aa3.13□□□□□ -1.91
SH3D19-203ENST00000409598 STARD9Q9P2P6 4700 aa3.12□□□□□ -1.91
SH3D19-203ENST00000409598 FAT2Q9NYQ8 4349 aa3.12□□□□□ -1.91
SH3D19-203ENST00000409598 MT1FP04733 61 aa3.12□□□□□ -1.91
SH3D19-203ENST00000409598 KRTAP12-3P60328 96 aa3.12□□□□□ -1.91
SH3D19-203ENST00000409598 DNAH3Q8TD57 4116 aa3.11□□□□□ -1.91
SH3D19-203ENST00000409598 SPRR2EP22531 72 aa3.11□□□□□ -1.91
SH3D19-203ENST00000409598 SPRR2BP35325 72 aa3.11□□□□□ -1.91
SH3D19-203ENST00000409598 SPRR2AP35326 72 aa3.11□□□□□ -1.91
SH3D19-203ENST00000409598 PCLOQ9Y6V0 5065 aa3.1□□□□□ -1.91
SH3D19-203ENST00000409598 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.91
SH3D19-203ENST00000409598 KRTAP10-7P60409 375 aaPredicted RBP3.09□□□□□ -1.91
SH3D19-203ENST00000409598 RYR2Q92736 4967 aa3.09□□□□□ -1.92
SH3D19-203ENST00000409598 KIAA1109Q2LD37 5005 aa3.08□□□□□ -1.92
SH3D19-203ENST00000409598 PRKDCP78527 4128 aaKnown RBP3.05□□□□□ -1.92
SH3D19-203ENST00000409598 SACSQ9NZJ4 4579 aa3.05□□□□□ -1.92
SH3D19-203ENST00000409598 DNAH8Q96JB1 4490 aa3.04□□□□□ -1.92
SH3D19-203ENST00000409598 SPRR2DP22532 72 aa3.03□□□□□ -1.92
SH3D19-203ENST00000409598 LCE2DQ5TA82 110 aaPredicted RBP3.03□□□□□ -1.92
SH3D19-203ENST00000409598 FAT1Q14517 4588 aa3.01□□□□□ -1.93
SH3D19-203ENST00000409598 KMT2AQ03164 3969 aa3.01□□□□□ -1.93
SH3D19-203ENST00000409598 DNAH6Q9C0G6 4158 aa3.01□□□□□ -1.93
SH3D19-203ENST00000409598 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
SH3D19-203ENST00000409598 KRTAP19-1Q8IUB9 90 aa2.99□□□□□ -1.93
SH3D19-203ENST00000409598 KRTAP19-4Q3LI73 84 aa2.98□□□□□ -1.93
SH3D19-203ENST00000409598 LCE2CQ5TA81 110 aa2.98□□□□□ -1.93
SH3D19-203ENST00000409598 CMYA5Q8N3K9 4069 aa2.98□□□□□ -1.93
SH3D19-203ENST00000409598 KRTAP10-5P60370 271 aa2.97□□□□□ -1.93
SH3D19-203ENST00000409598 FAT3Q8TDW7 4589 aa2.97□□□□□ -1.93
SH3D19-203ENST00000409598 LCE2BO14633 110 aa2.96□□□□□ -1.94
SH3D19-203ENST00000409598 VPS13BQ7Z7G8 4022 aa2.96□□□□□ -1.94
SH3D19-203ENST00000409598 PKHD1L1Q86WI1 4243 aa2.95□□□□□ -1.94
SH3D19-203ENST00000409598 KRTAP19-8Q3LI54 63 aa2.95□□□□□ -1.94
SH3D19-203ENST00000409598 MYCBP2O75592 4640 aa2.93□□□□□ -1.94
SH3D19-203ENST00000409598 HSPG2P98160 4391 aa2.92□□□□□ -1.94
SH3D19-203ENST00000409598 HECTD4Q9Y4D8 3996 aa2.91□□□□□ -1.94
SH3D19-203ENST00000409598 LYSTQ99698 3801 aa2.91□□□□□ -1.94
SH3D19-203ENST00000409598 APOBP04114 4563 aaKnown RBP2.91□□□□□ -1.94
SH3D19-203ENST00000409598 FRAS1Q86XX4 4008 aa2.91□□□□□ -1.94
SH3D19-203ENST00000409598 DNAH7Q8WXX0 4024 aa2.9□□□□□ -1.95
SH3D19-203ENST00000409598 KRTAP9-8Q9BYQ0 159 aa2.9□□□□□ -1.95
SH3D19-203ENST00000409598 LRP1Q07954 4544 aaKnown RBP2.87□□□□□ -1.95
SH3D19-203ENST00000409598 KRTAP9-7A8MTY7 169 aa2.87□□□□□ -1.95
SH3D19-203ENST00000409598 KRTAP9-3Q9BYQ3 159 aa2.87□□□□□ -1.95
SH3D19-203ENST00000409598 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
SH3D19-203ENST00000409598 KRTAP20-1Q3LI63 56 aa2.84□□□□□ -1.96
SH3D19-203ENST00000409598 KMT2CQ8NEZ4 4911 aaKnown RBP2.84□□□□□ -1.96
SH3D19-203ENST00000409598 LCE2AQ5TA79 106 aaPredicted RBP2.84□□□□□ -1.96
SH3D19-203ENST00000409598 EPPK1P58107 5090 aaKnown RBP2.83□□□□□ -1.96
SH3D19-203ENST00000409598 ABCA13Q86UQ4 5058 aa2.83□□□□□ -1.96
SH3D19-203ENST00000409598 KRTAP19-6Q3LI70 58 aa2.82□□□□□ -1.96
SH3D19-203ENST00000409598 PKD1P98161 4303 aa2.82□□□□□ -1.96
SH3D19-203ENST00000409598 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
SH3D19-203ENST00000409598 MT1BP07438 61 aa2.78□□□□□ -1.96
SH3D19-203ENST00000409598 HYDINQ4G0P3 5121 aa2.78□□□□□ -1.96
SH3D19-203ENST00000409598 MT1GP13640 62 aa2.78□□□□□ -1.96
SH3D19-203ENST00000409598 KRTAP6-3Q3LI67 103 aa2.75□□□□□ -1.97
SH3D19-203ENST00000409598 PKHD1P08F94 4074 aa2.75□□□□□ -1.97
SH3D19-203ENST00000409598 LRP2P98164 4655 aa2.72□□□□□ -1.97
SH3D19-203ENST00000409598 MT1XP80297 61 aa2.72□□□□□ -1.97
SH3D19-203ENST00000409598 LCE3BQ5TA77 95 aa2.71□□□□□ -1.98
SH3D19-203ENST00000409598 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.71□□□□□ -1.98
SH3D19-203ENST00000409598 KRTAP2-3P0C7H8 128 aa2.7□□□□□ -1.98
SH3D19-203ENST00000409598 KRTAP2-4Q9BYR9 128 aa2.7□□□□□ -1.98
SH3D19-203ENST00000409598 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
SH3D19-203ENST00000409598 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
SH3D19-203ENST00000409598 KRTAP19-2Q3LHN2 52 aa2.68□□□□□ -1.98
SH3D19-203ENST00000409598 UBR4Q5T4S7 5183 aa2.66□□□□□ -1.98
SH3D19-203ENST00000409598 KRTAP19-3Q7Z4W3 81 aa2.66□□□□□ -1.98
SH3D19-203ENST00000409598 RNF213Q63HN8 5207 aa2.62□□□□□ -1.99
SH3D19-203ENST00000409598 TNXBP22105 4242 aa2.6□□□□□ -1.99
SH3D19-203ENST00000409598 KRTAP4-8A0A0G2JLE6 195 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms