RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 SMR3BP02814 79 aaPredicted RBP1.44□□□□□ -2.18
RNU6ATAC40P-201ENST00000408580 NBEAL1Q6ZS30 2694 aa1.43□□□□□ -2.18
RNU6ATAC40P-201ENST00000408580 MGAM2Q2M2H8 2515 aa1.43□□□□□ -2.18
RNU6ATAC40P-201ENST00000408580 HECTD4Q9Y4D8 3996 aa1.43□□□□□ -2.18
RNU6ATAC40P-201ENST00000408580 PRO2289Q9P1D8 64 aa1.43□□□□□ -2.18
RNU6ATAC40P-201ENST00000408580 PKHD1L1Q86WI1 4243 aa1.42□□□□□ -2.18
RNU6ATAC40P-201ENST00000408580 A0A1B0GVY2 172 aa1.42□□□□□ -2.18
RNU6ATAC40P-201ENST00000408580 PLECQ15149 4684 aaKnown RBP1.42□□□□□ -2.18
RNU6ATAC40P-201ENST00000408580 FBN3Q75N90 2809 aa1.41□□□□□ -2.18
RNU6ATAC40P-201ENST00000408580 NOTCH1P46531 2555 aa1.41□□□□□ -2.18
RNU6ATAC40P-201ENST00000408580 INE1O15225 51 aa1.41□□□□□ -2.18
RNU6ATAC40P-201ENST00000408580 COL7A1Q02388 2944 aa1.4□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 KMT2AQ03164 3969 aa1.4□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 DNAH5Q8TE73 4624 aa1.4□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 STAB1Q9NY15 2570 aa1.4□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 DMBT1Q9UGM3 2413 aaPredicted RBP1.39□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 PKHD1P08F94 4074 aa1.38□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 TNP1P09430 55 aa1.38□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 PKD1P98161 4303 aa1.38□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 STARD9Q9P2P6 4700 aa1.38□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 LRP1BQ9NZR2 4599 aa1.37□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 LORP23490 312 aaPredicted RBP1.37□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 LCE2DQ5TA82 110 aaPredicted RBP1.37□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 Q5VSD8 79 aa1.36□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 LRP1Q07954 4544 aaKnown RBP1.36□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 FAT2Q9NYQ8 4349 aa1.35□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 VPS13BQ7Z7G8 4022 aa1.35□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 TNXBP22105 4242 aa1.35□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 APOBP04114 4563 aaKnown RBP1.34□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 MT1HL1P0DM35 61 aa1.34□□□□□ -2.19
RNU6ATAC40P-201ENST00000408580 HSPG2P98160 4391 aa1.32□□□□□ -2.2
RNU6ATAC40P-201ENST00000408580 MYCBP2O75592 4640 aa1.31□□□□□ -2.2
RNU6ATAC40P-201ENST00000408580 FAT3Q8TDW7 4589 aa1.31□□□□□ -2.2
RNU6ATAC40P-201ENST00000408580 FAT1Q14517 4588 aa1.3□□□□□ -2.2
RNU6ATAC40P-201ENST00000408580 DYNC1H1Q14204 4646 aaKnown RBP1.3□□□□□ -2.2
RNU6ATAC40P-201ENST00000408580 KRTAP19-2Q3LHN2 52 aa1.29□□□□□ -2.2
RNU6ATAC40P-201ENST00000408580 HYDINQ4G0P3 5121 aa1.27□□□□□ -2.21
RNU6ATAC40P-201ENST00000408580 KRTAP8-1Q8IUC2 63 aa1.27□□□□□ -2.21
RNU6ATAC40P-201ENST00000408580 KRTAP21-3Q3LHN1 58 aa1.26□□□□□ -2.21
RNU6ATAC40P-201ENST00000408580 LCE3AQ5TA76 89 aa1.26□□□□□ -2.21
RNU6ATAC40P-201ENST00000408580 KRTAP4-1Q9BYQ7 146 aa1.26□□□□□ -2.21
RNU6ATAC40P-201ENST00000408580 SPRR2GQ9BYE4 73 aa1.25□□□□□ -2.21
RNU6ATAC40P-201ENST00000408580 KRTAP17-1Q9BYP8 105 aa1.24□□□□□ -2.21
RNU6ATAC40P-201ENST00000408580 KRTAP10-12P60413 245 aa1.22□□□□□ -2.21
RNU6ATAC40P-201ENST00000408580 LCE2CQ5TA81 110 aa1.22□□□□□ -2.21
RNU6ATAC40P-201ENST00000408580 DNHD1Q96M86 4753 aa1.21□□□□□ -2.21
RNU6ATAC40P-201ENST00000408580 FLGP20930 4061 aaPredicted RBP1.21□□□□□ -2.22
RNU6ATAC40P-201ENST00000408580 KRTAP10-10P60014 251 aa1.21□□□□□ -2.22
RNU6ATAC40P-201ENST00000408580 KRTAP12-3P60328 96 aa1.21□□□□□ -2.22
RNU6ATAC40P-201ENST00000408580 LCE2AQ5TA79 106 aaPredicted RBP1.21□□□□□ -2.22
RNU6ATAC40P-201ENST00000408580 LCE2BO14633 110 aa1.2□□□□□ -2.22
RNU6ATAC40P-201ENST00000408580 KRTAP19-1Q8IUB9 90 aa1.2□□□□□ -2.22
RNU6ATAC40P-201ENST00000408580 MUC17Q685J3 4493 aa1.19□□□□□ -2.22
RNU6ATAC40P-201ENST00000408580 KRTAP10-5P60370 271 aa1.19□□□□□ -2.22
RNU6ATAC40P-201ENST00000408580 KRTAP19-8Q3LI54 63 aa1.18□□□□□ -2.22
RNU6ATAC40P-201ENST00000408580 HERC1Q15751 4861 aa1.16□□□□□ -2.22
RNU6ATAC40P-201ENST00000408580 LPAP08519 4548 aa1.16□□□□□ -2.22
RNU6ATAC40P-201ENST00000408580 KRTAP2-3P0C7H8 128 aa1.15□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 KRTAP19-4Q3LI73 84 aa1.15□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 LCE3CQ5T5A8 94 aa1.15□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 KRTAP2-4Q9BYR9 128 aa1.15□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 KRTAP2-1Q9BYU5 128 aa1.15□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 LRP2P98164 4655 aa1.14□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 MT1XP80297 61 aa1.14□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 RYR2Q92736 4967 aa1.14□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 MT1BP07438 61 aa1.13□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 KRTAP4-5Q9BYR2 181 aa1.13□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 MT2AP02795 61 aa1.12□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 MT1FP04733 61 aa1.12□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 KMT2CQ8NEZ4 4911 aaKnown RBP1.11□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 M0R2T5 61 aa1.11□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 KRTAP10-7P60409 375 aaPredicted RBP1.11□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 RYR1P21817 5038 aa1.11□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 MT1HP80294 61 aa1.1□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 KRTAP9-8Q9BYQ0 159 aa1.1□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 KRTAP19-5Q3LI72 72 aa1.09□□□□□ -2.23
RNU6ATAC40P-201ENST00000408580 KRTAP9-6A8MVA2 160 aa1.08□□□□□ -2.24
RNU6ATAC40P-201ENST00000408580 HMCN2Q8NDA2 5059 aa1.06□□□□□ -2.24
RNU6ATAC40P-201ENST00000408580 KRTAP9-3Q9BYQ3 159 aa1.06□□□□□ -2.24
RNU6ATAC40P-201ENST00000408580 RYR3Q15413 4870 aa1.03□□□□□ -2.24
RNU6ATAC40P-201ENST00000408580 KIAA1109Q2LD37 5005 aa1.03□□□□□ -2.24
RNU6ATAC40P-201ENST00000408580 ABCA13Q86UQ4 5058 aa1.02□□□□□ -2.25
RNU6ATAC40P-201ENST00000408580 KRTAP19-7Q3SYF9 63 aa1.02□□□□□ -2.25
RNU6ATAC40P-201ENST00000408580 MT1EP04732 61 aa1.01□□□□□ -2.25
RNU6ATAC40P-201ENST00000408580 KRTAP12-4P60329 112 aa1.01□□□□□ -2.25
RNU6ATAC40P-201ENST00000408580 MT1LQ93083 61 aa1.01□□□□□ -2.25
RNU6ATAC40P-201ENST00000408580 BIRC6Q9NR09 4857 aa1.01□□□□□ -2.25
RNU6ATAC40P-201ENST00000408580 KRTAP4-7Q9BYR0 210 aa0.99□□□□□ -2.25
RNU6ATAC40P-201ENST00000408580 KRTAP4-8A0A0G2JLE6 195 aa0.98□□□□□ -2.25
RNU6ATAC40P-201ENST00000408580 KRTAP4-8Q9BYQ9 185 aa0.98□□□□□ -2.25
RNU6ATAC40P-201ENST00000408580 PCLOQ9Y6V0 5065 aa0.98□□□□□ -2.25
RNU6ATAC40P-201ENST00000408580 MUC2Q02817 5179 aa0.97□□□□□ -2.25
RNU6ATAC40P-201ENST00000408580 MT1AP04731 61 aa0.96□□□□□ -2.26
RNU6ATAC40P-201ENST00000408580 HERC2O95714 4834 aa0.95□□□□□ -2.26
RNU6ATAC40P-201ENST00000408580 MT1GP13640 62 aa0.93□□□□□ -2.26
RNU6ATAC40P-201ENST00000408580 KRTAP5-3Q6L8H2 238 aa0.93□□□□□ -2.26
RNU6ATAC40P-201ENST00000408580 UBR4Q5T4S7 5183 aa0.92□□□□□ -2.26
RNU6ATAC40P-201ENST00000408580 LOC100996750A0A140TA64 210 aa0.92□□□□□ -2.26
RNU6ATAC40P-201ENST00000408580 LCE3EQ5T5B0 92 aa0.92□□□□□ -2.26
RNU6ATAC40P-201ENST00000408580 MT1MQ8N339 61 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms