RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 KRTAP10-6P60371 365 aaPredicted RBP2.28□□□□□ -2.05
PCDH11X-207ENST00000406881 DNAH10Q8IVF4 4471 aa2.27□□□□□ -2.05
PCDH11X-207ENST00000406881 DNAH17Q9UFH2 4485 aa2.26□□□□□ -2.05
PCDH11X-207ENST00000406881 PLECQ15149 4684 aaKnown RBP2.26□□□□□ -2.05
PCDH11X-207ENST00000406881 LORP23490 312 aaPredicted RBP2.26□□□□□ -2.05
PCDH11X-207ENST00000406881 KRTAP12-1P59990 96 aa2.25□□□□□ -2.05
PCDH11X-207ENST00000406881 DNAH1Q9P2D7 4330 aa2.25□□□□□ -2.05
PCDH11X-207ENST00000406881 PRO2289Q9P1D8 64 aa2.25□□□□□ -2.05
PCDH11X-207ENST00000406881 KRTAP12-2P59991 146 aa2.24□□□□□ -2.05
PCDH11X-207ENST00000406881 COL7A1Q02388 2944 aa2.24□□□□□ -2.05
PCDH11X-207ENST00000406881 KRTAP4-5Q9BYR2 181 aa2.24□□□□□ -2.05
PCDH11X-207ENST00000406881 DNAH11Q96DT5 4516 aa2.24□□□□□ -2.05
PCDH11X-207ENST00000406881 LOC100996750A0A140TA64 210 aa2.24□□□□□ -2.05
PCDH11X-207ENST00000406881 KRTAP4-6Q9BYQ5 205 aa2.24□□□□□ -2.05
PCDH11X-207ENST00000406881 DNAH5Q8TE73 4624 aa2.22□□□□□ -2.05
PCDH11X-207ENST00000406881 PRKDCP78527 4128 aaKnown RBP2.22□□□□□ -2.05
PCDH11X-207ENST00000406881 KRTAP13-4Q3LI77 160 aa2.22□□□□□ -2.05
PCDH11X-207ENST00000406881 KRTAP15-1Q3LI76 137 aa2.21□□□□□ -2.06
PCDH11X-207ENST00000406881 LCE2CQ5TA81 110 aa2.2□□□□□ -2.06
PCDH11X-207ENST00000406881 LYSTQ99698 3801 aa2.2□□□□□ -2.06
PCDH11X-207ENST00000406881 DNAH2Q9P225 4427 aa2.2□□□□□ -2.06
PCDH11X-207ENST00000406881 DYNC1H1Q14204 4646 aaKnown RBP2.19□□□□□ -2.06
PCDH11X-207ENST00000406881 RYR3Q15413 4870 aa2.18□□□□□ -2.06
PCDH11X-207ENST00000406881 DYNC2H1Q8NCM8 4307 aaKnown RBP2.17□□□□□ -2.06
PCDH11X-207ENST00000406881 STARD9Q9P2P6 4700 aa2.17□□□□□ -2.06
PCDH11X-207ENST00000406881 DNAH7Q8WXX0 4024 aa2.16□□□□□ -2.06
PCDH11X-207ENST00000406881 KMT2CQ8NEZ4 4911 aaKnown RBP2.14□□□□□ -2.07
PCDH11X-207ENST00000406881 DNAH6Q9C0G6 4158 aa2.14□□□□□ -2.07
PCDH11X-207ENST00000406881 LRP1BQ9NZR2 4599 aa2.14□□□□□ -2.07
PCDH11X-207ENST00000406881 SACSQ9NZJ4 4579 aa2.13□□□□□ -2.07
PCDH11X-207ENST00000406881 HERC2O95714 4834 aa2.13□□□□□ -2.07
PCDH11X-207ENST00000406881 DNAH8Q96JB1 4490 aa2.12□□□□□ -2.07
PCDH11X-207ENST00000406881 FAT2Q9NYQ8 4349 aa2.12□□□□□ -2.07
PCDH11X-207ENST00000406881 FAT1Q14517 4588 aa2.09□□□□□ -2.07
PCDH11X-207ENST00000406881 KRTAP23-1A1A580 65 aa2.09□□□□□ -2.08
PCDH11X-207ENST00000406881 RYR2Q92736 4967 aa2.09□□□□□ -2.08
PCDH11X-207ENST00000406881 KRTAP4-1Q9BYQ7 146 aa2.08□□□□□ -2.08
PCDH11X-207ENST00000406881 PCLOQ9Y6V0 5065 aa2.07□□□□□ -2.08
PCDH11X-207ENST00000406881 FRAS1Q86XX4 4008 aa2.07□□□□□ -2.08
PCDH11X-207ENST00000406881 HECTD4Q9Y4D8 3996 aa2.06□□□□□ -2.08
PCDH11X-207ENST00000406881 RYR1P21817 5038 aa2.05□□□□□ -2.08
PCDH11X-207ENST00000406881 KRTAP9-6A0A140TA67 174 aa2.05□□□□□ -2.08
PCDH11X-207ENST00000406881 EPPK1P58107 5090 aaKnown RBP2.04□□□□□ -2.08
PCDH11X-207ENST00000406881 HYDINQ4G0P3 5121 aa2.04□□□□□ -2.08
PCDH11X-207ENST00000406881 KIAA1109Q2LD37 5005 aa2.03□□□□□ -2.08
PCDH11X-207ENST00000406881 INE1O15225 51 aa2.02□□□□□ -2.09
PCDH11X-207ENST00000406881 KRTAP10-12P60413 245 aa2.02□□□□□ -2.09
PCDH11X-207ENST00000406881 KRTAP4-8Q9BYQ9 185 aa2.02□□□□□ -2.09
PCDH11X-207ENST00000406881 KMT2AQ03164 3969 aa2.02□□□□□ -2.09
PCDH11X-207ENST00000406881 MT1HP80294 61 aa2.02□□□□□ -2.09
PCDH11X-207ENST00000406881 APOBP04114 4563 aaKnown RBP2.02□□□□□ -2.09
PCDH11X-207ENST00000406881 KRTAP4-12Q9BQ66 201 aa2.01□□□□□ -2.09
PCDH11X-207ENST00000406881 SPRR2GQ9BYE4 73 aa2.01□□□□□ -2.09
PCDH11X-207ENST00000406881 MT2AP02795 61 aa1.99□□□□□ -2.09
PCDH11X-207ENST00000406881 VPS13BQ7Z7G8 4022 aa1.99□□□□□ -2.09
PCDH11X-207ENST00000406881 PKD1P98161 4303 aa1.98□□□□□ -2.09
PCDH11X-207ENST00000406881 KRTAP9-2Q9BYQ4 174 aa1.97□□□□□ -2.09
PCDH11X-207ENST00000406881 HSPG2P98160 4391 aa1.97□□□□□ -2.09
PCDH11X-207ENST00000406881 KRTAP12-3P60328 96 aa1.96□□□□□ -2.1
PCDH11X-207ENST00000406881 FAT3Q8TDW7 4589 aa1.96□□□□□ -2.1
PCDH11X-207ENST00000406881 MYCBP2O75592 4640 aa1.95□□□□□ -2.1
PCDH11X-207ENST00000406881 LCE3AQ5TA76 89 aa1.95□□□□□ -2.1
PCDH11X-207ENST00000406881 MT1FP04733 61 aa1.94□□□□□ -2.1
PCDH11X-207ENST00000406881 HERC1Q15751 4861 aa1.94□□□□□ -2.1
PCDH11X-207ENST00000406881 PKHD1P08F94 4074 aa1.93□□□□□ -2.1
PCDH11X-207ENST00000406881 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.93□□□□□ -2.1
PCDH11X-207ENST00000406881 LRP1Q07954 4544 aaKnown RBP1.92□□□□□ -2.1
PCDH11X-207ENST00000406881 KRTAP19-8Q3LI54 63 aa1.91□□□□□ -2.1
PCDH11X-207ENST00000406881 ABCA13Q86UQ4 5058 aa1.91□□□□□ -2.1
PCDH11X-207ENST00000406881 KRTAP19-1Q8IUB9 90 aa1.9□□□□□ -2.11
PCDH11X-207ENST00000406881 PKHD1L1Q86WI1 4243 aa1.89□□□□□ -2.11
PCDH11X-207ENST00000406881 CRCT1Q9UGL9 99 aa1.87□□□□□ -2.11
PCDH11X-207ENST00000406881 KRTAP19-4Q3LI73 84 aa1.87□□□□□ -2.11
PCDH11X-207ENST00000406881 KRTAP8-1Q8IUC2 63 aa1.86□□□□□ -2.11
PCDH11X-207ENST00000406881 KRTAP19-2Q3LHN2 52 aa1.86□□□□□ -2.11
PCDH11X-207ENST00000406881 KRTAP9-9Q9BYP9 154 aa1.86□□□□□ -2.11
PCDH11X-207ENST00000406881 KRTAP9-4Q9BYQ2 154 aa1.86□□□□□ -2.11
PCDH11X-207ENST00000406881 KRTAP9-8Q9BYQ0 159 aa1.86□□□□□ -2.11
PCDH11X-207ENST00000406881 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.11
PCDH11X-207ENST00000406881 MT1BP07438 61 aa1.82□□□□□ -2.12
PCDH11X-207ENST00000406881 LRP2P98164 4655 aa1.82□□□□□ -2.12
PCDH11X-207ENST00000406881 TNXBP22105 4242 aa1.81□□□□□ -2.12
PCDH11X-207ENST00000406881 KRTAP9-3Q9BYQ3 159 aa1.81□□□□□ -2.12
PCDH11X-207ENST00000406881 KRTAP10-5P60370 271 aa1.81□□□□□ -2.12
PCDH11X-207ENST00000406881 MT1XP80297 61 aa1.8□□□□□ -2.12
PCDH11X-207ENST00000406881 KRTAP9-7A8MTY7 169 aa1.8□□□□□ -2.12
PCDH11X-207ENST00000406881 KRTAP4-8A0A0G2JLE6 195 aa1.79□□□□□ -2.12
PCDH11X-207ENST00000406881 KRTAP19-5Q3LI72 72 aa1.79□□□□□ -2.12
PCDH11X-207ENST00000406881 MUC17Q685J3 4493 aa1.77□□□□□ -2.13
PCDH11X-207ENST00000406881 KRTAP4-7Q9BYR0 210 aa1.77□□□□□ -2.13
PCDH11X-207ENST00000406881 KRTAP10-7P60409 375 aaPredicted RBP1.77□□□□□ -2.13
PCDH11X-207ENST00000406881 LCE3CQ5T5A8 94 aa1.76□□□□□ -2.13
PCDH11X-207ENST00000406881 HMCN2Q8NDA2 5059 aa1.75□□□□□ -2.13
PCDH11X-207ENST00000406881 KRTAP4-2Q9BYR5 136 aa1.75□□□□□ -2.13
PCDH11X-207ENST00000406881 KRTAP4-9Q9BYQ8 210 aa1.75□□□□□ -2.13
PCDH11X-207ENST00000406881 SPRR2FQ96RM1 72 aa1.73□□□□□ -2.13
PCDH11X-207ENST00000406881 LPAP08519 4548 aa1.73□□□□□ -2.13
PCDH11X-207ENST00000406881 FLGP20930 4061 aaPredicted RBP1.72□□□□□ -2.13
PCDH11X-207ENST00000406881 KRTAP5-3Q6L8H2 238 aa1.72□□□□□ -2.13
PCDH11X-207ENST00000406881 RNF213Q63HN8 5207 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms