RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 DNAH1Q9P2D7 4330 aa2.23□□□□□ -2.05
HDAC9-204ENST00000406451 KRTAP10-12P60413 245 aa2.22□□□□□ -2.05
HDAC9-204ENST00000406451 DNAH11Q96DT5 4516 aa2.22□□□□□ -2.05
HDAC9-204ENST00000406451 KRTAP3-3Q9BYR6 98 aa2.22□□□□□ -2.05
HDAC9-204ENST00000406451 BIRC6Q9NR09 4857 aa2.2□□□□□ -2.06
HDAC9-204ENST00000406451 KRTAP3-2Q9BYR7 98 aa2.19□□□□□ -2.06
HDAC9-204ENST00000406451 DNAH2Q9P225 4427 aa2.19□□□□□ -2.06
HDAC9-204ENST00000406451 KRTAP19-4Q3LI73 84 aa2.19□□□□□ -2.06
HDAC9-204ENST00000406451 RYR2Q92736 4967 aa2.18□□□□□ -2.06
HDAC9-204ENST00000406451 DNAH9Q9NYC9 4486 aa2.16□□□□□ -2.06
HDAC9-204ENST00000406451 SACSQ9NZJ4 4579 aa2.16□□□□□ -2.06
HDAC9-204ENST00000406451 PCLOQ9Y6V0 5065 aa2.16□□□□□ -2.06
HDAC9-204ENST00000406451 ANK2Q01484 3957 aa2.15□□□□□ -2.07
HDAC9-204ENST00000406451 CRCT1Q9UGL9 99 aa2.14□□□□□ -2.07
HDAC9-204ENST00000406451 DNAH17Q9UFH2 4485 aa2.14□□□□□ -2.07
HDAC9-204ENST00000406451 DYNC1H1Q14204 4646 aaKnown RBP2.13□□□□□ -2.07
HDAC9-204ENST00000406451 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
HDAC9-204ENST00000406451 LRP1BQ9NZR2 4599 aa2.13□□□□□ -2.07
HDAC9-204ENST00000406451 PRKDCP78527 4128 aaKnown RBP2.12□□□□□ -2.07
HDAC9-204ENST00000406451 KRTAP8-1Q8IUC2 63 aa2.12□□□□□ -2.07
HDAC9-204ENST00000406451 HYDINQ4G0P3 5121 aa2.11□□□□□ -2.07
HDAC9-204ENST00000406451 DNAH5Q8TE73 4624 aa2.11□□□□□ -2.07
HDAC9-204ENST00000406451 MT1HP80294 61 aa2.11□□□□□ -2.07
HDAC9-204ENST00000406451 KRTAP4-1Q9BYQ7 146 aa2.11□□□□□ -2.07
HDAC9-204ENST00000406451 HSPG2P98160 4391 aa2.1□□□□□ -2.07
HDAC9-204ENST00000406451 KIAA1109Q2LD37 5005 aa2.1□□□□□ -2.07
HDAC9-204ENST00000406451 DNHD1Q96M86 4753 aa2.1□□□□□ -2.07
HDAC9-204ENST00000406451 DNAH3Q8TD57 4116 aa2.1□□□□□ -2.07
HDAC9-204ENST00000406451 LORP23490 312 aaPredicted RBP2.09□□□□□ -2.07
HDAC9-204ENST00000406451 VPS13DQ5THJ4 4388 aa2.08□□□□□ -2.08
HDAC9-204ENST00000406451 LCE3AQ5TA76 89 aa2.08□□□□□ -2.08
HDAC9-204ENST00000406451 LYSTQ99698 3801 aa2.08□□□□□ -2.08
HDAC9-204ENST00000406451 STARD9Q9P2P6 4700 aa2.07□□□□□ -2.08
HDAC9-204ENST00000406451 RYR3Q15413 4870 aa2.07□□□□□ -2.08
HDAC9-204ENST00000406451 KMT2AQ03164 3969 aa2.07□□□□□ -2.08
HDAC9-204ENST00000406451 DNAH7Q8WXX0 4024 aa2.07□□□□□ -2.08
HDAC9-204ENST00000406451 VPS13BQ7Z7G8 4022 aa2.06□□□□□ -2.08
HDAC9-204ENST00000406451 MT2AP02795 61 aa2.06□□□□□ -2.08
HDAC9-204ENST00000406451 FAT2Q9NYQ8 4349 aa2.06□□□□□ -2.08
HDAC9-204ENST00000406451 KMT2CQ8NEZ4 4911 aaKnown RBP2.05□□□□□ -2.08
HDAC9-204ENST00000406451 ABCA13Q86UQ4 5058 aa2.03□□□□□ -2.08
HDAC9-204ENST00000406451 HERC2O95714 4834 aa2.03□□□□□ -2.08
HDAC9-204ENST00000406451 CMYA5Q8N3K9 4069 aa2.03□□□□□ -2.08
HDAC9-204ENST00000406451 MYCBP2O75592 4640 aa2.03□□□□□ -2.09
HDAC9-204ENST00000406451 DYNC2H1Q8NCM8 4307 aaKnown RBP2.02□□□□□ -2.09
HDAC9-204ENST00000406451 HECTD4Q9Y4D8 3996 aa2.02□□□□□ -2.09
HDAC9-204ENST00000406451 SPRR2GQ9BYE4 73 aa2.02□□□□□ -2.09
HDAC9-204ENST00000406451 INE1O15225 51 aa2.02□□□□□ -2.09
HDAC9-204ENST00000406451 DNAH6Q9C0G6 4158 aa2.02□□□□□ -2.09
HDAC9-204ENST00000406451 MT1FP04733 61 aa2.01□□□□□ -2.09
HDAC9-204ENST00000406451 DNAH8Q96JB1 4490 aa2.01□□□□□ -2.09
HDAC9-204ENST00000406451 APOBP04114 4563 aaKnown RBP2□□□□□ -2.09
HDAC9-204ENST00000406451 SPRR2FQ96RM1 72 aa1.99□□□□□ -2.09
HDAC9-204ENST00000406451 FAT1Q14517 4588 aa1.97□□□□□ -2.09
HDAC9-204ENST00000406451 KRTAP17-1Q9BYP8 105 aa1.96□□□□□ -2.1
HDAC9-204ENST00000406451 SPRR5A0A1B0GTR4 108 aa1.95□□□□□ -2.1
HDAC9-204ENST00000406451 KRTAP10-7P60409 375 aaPredicted RBP1.94□□□□□ -2.1
HDAC9-204ENST00000406451 KRTAP10-5P60370 271 aa1.94□□□□□ -2.1
HDAC9-204ENST00000406451 FAT3Q8TDW7 4589 aa1.93□□□□□ -2.1
HDAC9-204ENST00000406451 HMCN2Q8NDA2 5059 aa1.93□□□□□ -2.1
HDAC9-204ENST00000406451 EPPK1P58107 5090 aaKnown RBP1.92□□□□□ -2.1
HDAC9-204ENST00000406451 RNF213Q63HN8 5207 aa1.92□□□□□ -2.1
HDAC9-204ENST00000406451 KRTAP19-5Q3LI72 72 aa1.91□□□□□ -2.1
HDAC9-204ENST00000406451 FRAS1Q86XX4 4008 aa1.9□□□□□ -2.11
HDAC9-204ENST00000406451 UBR4Q5T4S7 5183 aa1.89□□□□□ -2.11
HDAC9-204ENST00000406451 KRTAP19-8Q3LI54 63 aa1.89□□□□□ -2.11
HDAC9-204ENST00000406451 SPRR2EP22531 72 aa1.88□□□□□ -2.11
HDAC9-204ENST00000406451 SPRR2BP35325 72 aa1.88□□□□□ -2.11
HDAC9-204ENST00000406451 SPRR2AP35326 72 aa1.88□□□□□ -2.11
HDAC9-204ENST00000406451 PKHD1P08F94 4074 aa1.86□□□□□ -2.11
HDAC9-204ENST00000406451 KRTAP19-1Q8IUB9 90 aa1.86□□□□□ -2.11
HDAC9-204ENST00000406451 MUC17Q685J3 4493 aa1.85□□□□□ -2.11
HDAC9-204ENST00000406451 LCE3CQ5T5A8 94 aa1.85□□□□□ -2.11
HDAC9-204ENST00000406451 PKHD1L1Q86WI1 4243 aa1.85□□□□□ -2.11
HDAC9-204ENST00000406451 KRTAP9-8Q9BYQ0 159 aa1.84□□□□□ -2.11
HDAC9-204ENST00000406451 LRP1Q07954 4544 aaKnown RBP1.83□□□□□ -2.12
HDAC9-204ENST00000406451 SPRR2DP22532 72 aa1.83□□□□□ -2.12
HDAC9-204ENST00000406451 MT1XP80297 61 aa1.82□□□□□ -2.12
HDAC9-204ENST00000406451 LCE2CQ5TA81 110 aa1.82□□□□□ -2.12
HDAC9-204ENST00000406451 KRTAP9-3Q9BYQ3 159 aa1.81□□□□□ -2.12
HDAC9-204ENST00000406451 LCE2BO14633 110 aa1.81□□□□□ -2.12
HDAC9-204ENST00000406451 MT1BP07438 61 aa1.81□□□□□ -2.12
HDAC9-204ENST00000406451 FLGP20930 4061 aaPredicted RBP1.8□□□□□ -2.12
HDAC9-204ENST00000406451 USH2AO75445 5202 aa1.79□□□□□ -2.12
HDAC9-204ENST00000406451 PKD1P98161 4303 aa1.79□□□□□ -2.12
HDAC9-204ENST00000406451 KRTAP19-2Q3LHN2 52 aa1.78□□□□□ -2.13
HDAC9-204ENST00000406451 FAT4Q6V0I7 4981 aa1.77□□□□□ -2.13
HDAC9-204ENST00000406451 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
HDAC9-204ENST00000406451 KRTAP9-2Q9BYQ4 174 aa1.75□□□□□ -2.13
HDAC9-204ENST00000406451 MT1GP13640 62 aa1.75□□□□□ -2.13
HDAC9-204ENST00000406451 KRTAP4-8A0A0G2JLE6 195 aa1.74□□□□□ -2.13
HDAC9-204ENST00000406451 KRTAP4-8Q9BYQ9 185 aa1.74□□□□□ -2.13
HDAC9-204ENST00000406451 LRP2P98164 4655 aa1.73□□□□□ -2.13
HDAC9-204ENST00000406451 MT3P25713 68 aa1.73□□□□□ -2.13
HDAC9-204ENST00000406451 LCE3BQ5TA77 95 aa1.73□□□□□ -2.13
HDAC9-204ENST00000406451 KRTAP19-3Q7Z4W3 81 aa1.69□□□□□ -2.14
HDAC9-204ENST00000406451 TNXBP22105 4242 aa1.69□□□□□ -2.14
HDAC9-204ENST00000406451 KRTAP19-6Q3LI70 58 aa1.68□□□□□ -2.14
HDAC9-204ENST00000406451 LCE2DQ5TA82 110 aaPredicted RBP1.68□□□□□ -2.14
HDAC9-204ENST00000406451 KRTAP9-6A0A140TA67 174 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms