RNA–Protein interactions for RNA: ENST00000406310.5

ESRRA-203, Transcript of estrogen related receptor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ESRRA, Length 2,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-203ENST00000406310 A0A0D9SG42 100 aa12.26□□□□□ -0.45
ESRRA-203ENST00000406310 KRTAP3-2Q9BYR7 98 aa12.25□□□□□ -0.45
ESRRA-203ENST00000406310 SMR3BP02814 79 aaPredicted RBP12.21□□□□□ -0.46
ESRRA-203ENST00000406310 S4R3F8 94 aa12.19□□□□□ -0.46
ESRRA-203ENST00000406310 A0A1B0GVY2 172 aa12.16□□□□□ -0.46
ESRRA-203ENST00000406310 RYR3Q15413 4870 aa12.16□□□□□ -0.46
ESRRA-203ENST00000406310 KRTAP10-4P60372 401 aaPredicted RBP12.14□□□□□ -0.47
ESRRA-203ENST00000406310 DYNC1H1Q14204 4646 aaKnown RBP12.12□□□□□ -0.47
ESRRA-203ENST00000406310 APOBP04114 4563 aaKnown RBP12.11□□□□□ -0.47
ESRRA-203ENST00000406310 KRTAP15-1Q3LI76 137 aa12.1□□□□□ -0.47
ESRRA-203ENST00000406310 C10orf95Q9H7T3 257 aa12.07□□□□□ -0.48
ESRRA-203ENST00000406310 DMBT1Q9UGM3 2413 aaPredicted RBP11.99□□□□□ -0.49
ESRRA-203ENST00000406310 KRTAP12-2P59991 146 aa11.98□□□□□ -0.49
ESRRA-203ENST00000406310 NDUFAF8A1L188 74 aa11.95□□□□□ -0.5
ESRRA-203ENST00000406310 FAT1Q14517 4588 aa11.91□□□□□ -0.5
ESRRA-203ENST00000406310 KRTAP12-1P59990 96 aa11.91□□□□□ -0.5
ESRRA-203ENST00000406310 KRTAP10-8P60410 259 aa11.9□□□□□ -0.5
ESRRA-203ENST00000406310 XP32Q5T750 250 aa11.87□□□□□ -0.51
ESRRA-203ENST00000406310 M0QZ58 72 aa11.85□□□□□ -0.51
ESRRA-203ENST00000406310 FAT3Q8TDW7 4589 aa11.81□□□□□ -0.52
ESRRA-203ENST00000406310 LRP1Q07954 4544 aaKnown RBP11.75□□□□□ -0.53
ESRRA-203ENST00000406310 EPPK1P58107 5090 aaKnown RBP11.74□□□□□ -0.53
ESRRA-203ENST00000406310 HSPG2P98160 4391 aa11.7□□□□□ -0.54
ESRRA-203ENST00000406310 TNXBP22105 4242 aa11.7□□□□□ -0.54
ESRRA-203ENST00000406310 KRTAP17-1Q9BYP8 105 aa11.65□□□□□ -0.54
ESRRA-203ENST00000406310 KIAA1109Q2LD37 5005 aa11.64□□□□□ -0.55
ESRRA-203ENST00000406310 RYR1P21817 5038 aa11.62□□□□□ -0.55
ESRRA-203ENST00000406310 Q5VSD8 79 aa11.59□□□□□ -0.55
ESRRA-203ENST00000406310 R4GN34 69 aa11.35□□□□□ -0.59
ESRRA-203ENST00000406310 PLAC4Q8WY50 150 aa11.34□□□□□ -0.59
ESRRA-203ENST00000406310 MYCBP2O75592 4640 aa11.32□□□□□ -0.6
ESRRA-203ENST00000406310 KRTAP4-5Q9BYR2 181 aa11.31□□□□□ -0.6
ESRRA-203ENST00000406310 MT1HL1P0DM35 61 aa11.17□□□□□ -0.62
ESRRA-203ENST00000406310 PP632Q6XCG6 107 aa11.16□□□□□ -0.62
ESRRA-203ENST00000406310 BIRC6Q9NR09 4857 aa11.12□□□□□ -0.63
ESRRA-203ENST00000406310 ABCA13Q86UQ4 5058 aa11.08□□□□□ -0.64
ESRRA-203ENST00000406310 LUZP6Q538Z0 58 aa11.05□□□□□ -0.64
ESRRA-203ENST00000406310 LPAP08519 4548 aa11.01□□□□□ -0.65
ESRRA-203ENST00000406310 HERC2O95714 4834 aa10.99□□□□□ -0.65
ESRRA-203ENST00000406310 LRP2P98164 4655 aa10.93□□□□□ -0.66
ESRRA-203ENST00000406310 A0A0A0MQY5 61 aa10.89□□□□□ -0.67
ESRRA-203ENST00000406310 LORP23490 312 aaPredicted RBP10.89□□□□□ -0.67
ESRRA-203ENST00000406310 SEC61BP60468 96 aaKnown RBP10.85□□□□□ -0.67
ESRRA-203ENST00000406310 CAMK2N1Q7Z7J9 78 aa10.84□□□□□ -0.67
ESRRA-203ENST00000406310 J3QL48 77 aa10.82□□□□□ -0.68
ESRRA-203ENST00000406310 PCLOQ9Y6V0 5065 aa10.74□□□□□ -0.69
ESRRA-203ENST00000406310 KRTAP23-1A1A580 65 aa10.69□□□□□ -0.7
ESRRA-203ENST00000406310 MUC17Q685J3 4493 aa10.59□□□□□ -0.71
ESRRA-203ENST00000406310 TNP1P09430 55 aa10.57□□□□□ -0.72
ESRRA-203ENST00000406310 HERC1Q15751 4861 aa10.52□□□□□ -0.73
ESRRA-203ENST00000406310 SPRR5A0A1B0GTR4 108 aa10.51□□□□□ -0.73
ESRRA-203ENST00000406310 KRTAP4-1Q9BYQ7 146 aa10.47□□□□□ -0.73
ESRRA-203ENST00000406310 KRTAP19-2Q3LHN2 52 aa10.45□□□□□ -0.74
ESRRA-203ENST00000406310 HMCN2Q8NDA2 5059 aa10.27□□□□□ -0.77
ESRRA-203ENST00000406310 MUC2Q02817 5179 aa10.14□□□□□ -0.79
ESRRA-203ENST00000406310 FLGP20930 4061 aaPredicted RBP10.08□□□□□ -0.8
ESRRA-203ENST00000406310 UBR4Q5T4S7 5183 aa9.96□□□□□ -0.82
ESRRA-203ENST00000406310 SPRR2GQ9BYE4 73 aa9.92□□□□□ -0.82
ESRRA-203ENST00000406310 PRO2289Q9P1D8 64 aa9.92□□□□□ -0.82
ESRRA-203ENST00000406310 RNF213Q63HN8 5207 aa9.86□□□□□ -0.83
ESRRA-203ENST00000406310 INE1O15225 51 aa9.82□□□□□ -0.84
ESRRA-203ENST00000406310 LCE3AQ5TA76 89 aa9.8□□□□□ -0.84
ESRRA-203ENST00000406310 KRTAP19-1Q8IUB9 90 aa9.73□□□□□ -0.85
ESRRA-203ENST00000406310 FAT4Q6V0I7 4981 aa9.68□□□□□ -0.86
ESRRA-203ENST00000406310 KRTAP8-1Q8IUC2 63 aa9.67□□□□□ -0.86
ESRRA-203ENST00000406310 LCE2CQ5TA81 110 aa9.58□□□□□ -0.88
ESRRA-203ENST00000406310 M0R2T5 61 aa9.43□□□□□ -0.9
ESRRA-203ENST00000406310 MT1HP80294 61 aa9.38□□□□□ -0.91
ESRRA-203ENST00000406310 KRTAP19-8Q3LI54 63 aa9.38□□□□□ -0.91
ESRRA-203ENST00000406310 KRTAP12-3P60328 96 aa9.37□□□□□ -0.91
ESRRA-203ENST00000406310 KRTAP10-10P60014 251 aa9.34□□□□□ -0.91
ESRRA-203ENST00000406310 MT2AP02795 61 aa9.3□□□□□ -0.92
ESRRA-203ENST00000406310 MT1FP04733 61 aa9.29□□□□□ -0.92
ESRRA-203ENST00000406310 KRTAP10-12P60413 245 aa9.29□□□□□ -0.92
ESRRA-203ENST00000406310 KRTAP10-5P60370 271 aa9.25□□□□□ -0.93
ESRRA-203ENST00000406310 MT1XP80297 61 aa9.22□□□□□ -0.93
ESRRA-203ENST00000406310 KRTAP9-8Q9BYQ0 159 aa9.16□□□□□ -0.94
ESRRA-203ENST00000406310 MT1BP07438 61 aa9.14□□□□□ -0.95
ESRRA-203ENST00000406310 KRTAP10-7P60409 375 aaPredicted RBP8.96□□□□□ -0.97
ESRRA-203ENST00000406310 LCE2AQ5TA79 106 aaPredicted RBP8.92□□□□□ -0.98
ESRRA-203ENST00000406310 LCE3CQ5T5A8 94 aa8.86□□□□□ -0.99
ESRRA-203ENST00000406310 KRTAP9-3Q9BYQ3 159 aa8.76□□□□□ -1.01
ESRRA-203ENST00000406310 KRTAP19-5Q3LI72 72 aa8.72□□□□□ -1.01
ESRRA-203ENST00000406310 KRTAP2-3P0C7H8 128 aa8.51□□□□□ -1.05
ESRRA-203ENST00000406310 KRTAP2-4Q9BYR9 128 aa8.51□□□□□ -1.05
ESRRA-203ENST00000406310 KRTAP2-1Q9BYU5 128 aa8.51□□□□□ -1.05
ESRRA-203ENST00000406310 LCE2BO14633 110 aa8.5□□□□□ -1.05
ESRRA-203ENST00000406310 KRTAP19-4Q3LI73 84 aa8.49□□□□□ -1.05
ESRRA-203ENST00000406310 USH2AO75445 5202 aa8.47□□□□□ -1.05
ESRRA-203ENST00000406310 KRTAP9-6A8MVA2 160 aa8.45□□□□□ -1.06
ESRRA-203ENST00000406310 FSIP2Q5CZC0 6907 aa8.26□□□□□ -1.09
ESRRA-203ENST00000406310 KRTAP4-8A0A0G2JLE6 195 aa8.21□□□□□ -1.1
ESRRA-203ENST00000406310 KRTAP19-7Q3SYF9 63 aa8.21□□□□□ -1.1
ESRRA-203ENST00000406310 KRTAP4-8Q9BYQ9 185 aa8.21□□□□□ -1.1
ESRRA-203ENST00000406310 SSPOA2VEC9 5147 aa8.08□□□□□ -1.12
ESRRA-203ENST00000406310 KRTAP4-7Q9BYR0 210 aa8.07□□□□□ -1.12
ESRRA-203ENST00000406310 MT1LQ93083 61 aa8.05□□□□□ -1.12
ESRRA-203ENST00000406310 KMT2DO14686 5537 aa8□□□□□ -1.13
ESRRA-203ENST00000406310 LCE2DQ5TA82 110 aaPredicted RBP7.98□□□□□ -1.13
ESRRA-203ENST00000406310 MT1EP04732 61 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms