RNA–Protein interactions for RNA: ENST00000402340.2

FAM47DP-201, Transcript of family with sequence similarity 47 member D, pseudogene, humanhuman

BASIC

Gene FAM47DP, Length 3,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DP-201ENST00000402340 HSPG2P98160 4391 aa6.39□□□□□ -1.39
FAM47DP-201ENST00000402340 K7ERS5 55 aa6.39□□□□□ -1.39
FAM47DP-201ENST00000402340 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
FAM47DP-201ENST00000402340 KRTAP3-2Q9BYR7 98 aa6.39□□□□□ -1.39
FAM47DP-201ENST00000402340 KRTAP13-4Q3LI77 160 aa6.35□□□□□ -1.39
FAM47DP-201ENST00000402340 ROMO1P60602 79 aa6.33□□□□□ -1.4
FAM47DP-201ENST00000402340 XP32Q5T750 250 aa6.33□□□□□ -1.4
FAM47DP-201ENST00000402340 S4R3F8 94 aa6.3□□□□□ -1.4
FAM47DP-201ENST00000402340 KMT2CQ8NEZ4 4911 aaKnown RBP6.24□□□□□ -1.41
FAM47DP-201ENST00000402340 CRIPTQ9P021 101 aa6.24□□□□□ -1.41
FAM47DP-201ENST00000402340 P0C880 135 aa6.23□□□□□ -1.41
FAM47DP-201ENST00000402340 Q5VSD8 79 aa6.22□□□□□ -1.41
FAM47DP-201ENST00000402340 A0A0D9SG42 100 aa6.2□□□□□ -1.42
FAM47DP-201ENST00000402340 TPRXLQ17RH7 258 aa6.19□□□□□ -1.42
FAM47DP-201ENST00000402340 MYCBP2O75592 4640 aa6.18□□□□□ -1.42
FAM47DP-201ENST00000402340 H3BS24 57 aa6.17□□□□□ -1.42
FAM47DP-201ENST00000402340 RYR1P21817 5038 aa6.17□□□□□ -1.42
FAM47DP-201ENST00000402340 MT1HL1P0DM35 61 aa6.16□□□□□ -1.42
FAM47DP-201ENST00000402340 KRTAP17-1Q9BYP8 105 aa6.16□□□□□ -1.42
FAM47DP-201ENST00000402340 DMBT1Q9UGM3 2413 aaPredicted RBP6.15□□□□□ -1.43
FAM47DP-201ENST00000402340 KRTAP12-2P59991 146 aa6.15□□□□□ -1.43
FAM47DP-201ENST00000402340 KRTAP12-1P59990 96 aa6.12□□□□□ -1.43
FAM47DP-201ENST00000402340 LPAP08519 4548 aa6.1□□□□□ -1.43
FAM47DP-201ENST00000402340 M0QZ58 72 aa6.07□□□□□ -1.44
FAM47DP-201ENST00000402340 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
FAM47DP-201ENST00000402340 RYR3Q15413 4870 aa6.03□□□□□ -1.44
FAM47DP-201ENST00000402340 LRP2P98164 4655 aa6.01□□□□□ -1.45
FAM47DP-201ENST00000402340 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
FAM47DP-201ENST00000402340 SPINT4Q6UDR6 99 aa5.99□□□□□ -1.45
FAM47DP-201ENST00000402340 KIAA1109Q2LD37 5005 aa5.96□□□□□ -1.45
FAM47DP-201ENST00000402340 MUC17Q685J3 4493 aa5.85□□□□□ -1.47
FAM47DP-201ENST00000402340 ABCA13Q86UQ4 5058 aa5.85□□□□□ -1.47
FAM47DP-201ENST00000402340 R4GN34 69 aa5.82□□□□□ -1.48
FAM47DP-201ENST00000402340 EPPK1P58107 5090 aaKnown RBP5.79□□□□□ -1.48
FAM47DP-201ENST00000402340 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
FAM47DP-201ENST00000402340 SEC61BP60468 96 aaKnown RBP5.78□□□□□ -1.48
FAM47DP-201ENST00000402340 NDUFAF8A1L188 74 aa5.77□□□□□ -1.49
FAM47DP-201ENST00000402340 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
FAM47DP-201ENST00000402340 KRTAP4-1Q9BYQ7 146 aa5.75□□□□□ -1.49
FAM47DP-201ENST00000402340 KRTAP4-5Q9BYR2 181 aa5.73□□□□□ -1.49
FAM47DP-201ENST00000402340 PLAC4Q8WY50 150 aa5.62□□□□□ -1.51
FAM47DP-201ENST00000402340 PP632Q6XCG6 107 aa5.6□□□□□ -1.51
FAM47DP-201ENST00000402340 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
FAM47DP-201ENST00000402340 CAMK2N1Q7Z7J9 78 aa5.5□□□□□ -1.53
FAM47DP-201ENST00000402340 J3QL48 77 aa5.49□□□□□ -1.53
FAM47DP-201ENST00000402340 HERC1Q15751 4861 aa5.48□□□□□ -1.53
FAM47DP-201ENST00000402340 HERC2O95714 4834 aa5.48□□□□□ -1.53
FAM47DP-201ENST00000402340 BIRC6Q9NR09 4857 aa5.47□□□□□ -1.53
FAM47DP-201ENST00000402340 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
FAM47DP-201ENST00000402340 MUC2Q02817 5179 aa5.42□□□□□ -1.54
FAM47DP-201ENST00000402340 TNP1P09430 55 aa5.38□□□□□ -1.55
FAM47DP-201ENST00000402340 PCLOQ9Y6V0 5065 aa5.35□□□□□ -1.55
FAM47DP-201ENST00000402340 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.55
FAM47DP-201ENST00000402340 LUZP6Q538Z0 58 aa5.33□□□□□ -1.56
FAM47DP-201ENST00000402340 LCE2CQ5TA81 110 aa5.32□□□□□ -1.56
FAM47DP-201ENST00000402340 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
FAM47DP-201ENST00000402340 HMCN2Q8NDA2 5059 aa5.27□□□□□ -1.57
FAM47DP-201ENST00000402340 KRTAP19-1Q8IUB9 90 aa5.26□□□□□ -1.57
FAM47DP-201ENST00000402340 FAT4Q6V0I7 4981 aa5.15□□□□□ -1.58
FAM47DP-201ENST00000402340 A0A0A0MQY5 61 aa5.14□□□□□ -1.59
FAM47DP-201ENST00000402340 MT1HP80294 61 aa5.13□□□□□ -1.59
FAM47DP-201ENST00000402340 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
FAM47DP-201ENST00000402340 MT1FP04733 61 aa5.08□□□□□ -1.6
FAM47DP-201ENST00000402340 MT2AP02795 61 aa5.08□□□□□ -1.6
FAM47DP-201ENST00000402340 KRTAP19-8Q3LI54 63 aa5.07□□□□□ -1.6
FAM47DP-201ENST00000402340 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
FAM47DP-201ENST00000402340 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
FAM47DP-201ENST00000402340 M0R2T5 61 aa5.02□□□□□ -1.61
FAM47DP-201ENST00000402340 RNF213Q63HN8 5207 aa5.01□□□□□ -1.61
FAM47DP-201ENST00000402340 UBR4Q5T4S7 5183 aa5□□□□□ -1.61
FAM47DP-201ENST00000402340 KRTAP10-10P60014 251 aa5□□□□□ -1.61
FAM47DP-201ENST00000402340 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
FAM47DP-201ENST00000402340 MT1BP07438 61 aa4.97□□□□□ -1.61
FAM47DP-201ENST00000402340 MT1XP80297 61 aa4.96□□□□□ -1.62
FAM47DP-201ENST00000402340 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
FAM47DP-201ENST00000402340 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
FAM47DP-201ENST00000402340 KRTAP9-3Q9BYQ3 159 aa4.84□□□□□ -1.63
FAM47DP-201ENST00000402340 KRTAP10-7P60409 375 aaPredicted RBP4.79□□□□□ -1.64
FAM47DP-201ENST00000402340 INE1O15225 51 aa4.73□□□□□ -1.65
FAM47DP-201ENST00000402340 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
FAM47DP-201ENST00000402340 LCE2DQ5TA82 110 aaPredicted RBP4.72□□□□□ -1.65
FAM47DP-201ENST00000402340 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
FAM47DP-201ENST00000402340 LCE2BO14633 110 aa4.6□□□□□ -1.67
FAM47DP-201ENST00000402340 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
FAM47DP-201ENST00000402340 LCE2AQ5TA79 106 aaPredicted RBP4.46□□□□□ -1.7
FAM47DP-201ENST00000402340 KRTAP9-6A8MVA2 160 aa4.45□□□□□ -1.7
FAM47DP-201ENST00000402340 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
FAM47DP-201ENST00000402340 KRTAP4-8Q9BYQ9 185 aa4.44□□□□□ -1.7
FAM47DP-201ENST00000402340 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
FAM47DP-201ENST00000402340 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
FAM47DP-201ENST00000402340 KMT2DO14686 5537 aa4.41□□□□□ -1.7
FAM47DP-201ENST00000402340 USH2AO75445 5202 aa4.41□□□□□ -1.7
FAM47DP-201ENST00000402340 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
FAM47DP-201ENST00000402340 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
FAM47DP-201ENST00000402340 KRTAP2-1Q9BYU5 128 aa4.39□□□□□ -1.71
FAM47DP-201ENST00000402340 MT1LQ93083 61 aa4.3□□□□□ -1.72
FAM47DP-201ENST00000402340 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
FAM47DP-201ENST00000402340 MT1EP04732 61 aa4.28□□□□□ -1.72
FAM47DP-201ENST00000402340 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
FAM47DP-201ENST00000402340 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms