RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 HILPDAQ9Y5L2 63 aa-0.7□□□□□ -2.52
CBX3P9-201ENST00000402326 KIF1AQ12756 1690 aa-0.7□□□□□ -2.52
CBX3P9-201ENST00000402326 TOGARAM1Q9Y4F4 1720 aa-0.7□□□□□ -2.52
CBX3P9-201ENST00000402326 CDC42BPGQ6DT37 1551 aa-0.7□□□□□ -2.52
CBX3P9-201ENST00000402326 SPTBN5Q9NRC6 3674 aaKnown RBP-0.7□□□□□ -2.52
CBX3P9-201ENST00000402326 MT1MQ8N339 61 aa-0.71□□□□□ -2.52
CBX3P9-201ENST00000402326 DNAH8Q96JB1 4490 aa-0.71□□□□□ -2.52
CBX3P9-201ENST00000402326 DNAH10Q8IVF4 4471 aa-0.72□□□□□ -2.52
CBX3P9-201ENST00000402326 MT2AP02795 61 aa-0.72□□□□□ -2.52
CBX3P9-201ENST00000402326 DEFB1P60022 68 aa-0.72□□□□□ -2.52
CBX3P9-201ENST00000402326 KRTAP8-1Q8IUC2 63 aa-0.72□□□□□ -2.52
CBX3P9-201ENST00000402326 ATXN8Q156A1 80 aa-0.73□□□□□ -2.53
CBX3P9-201ENST00000402326 NCBP2-AS2Q69YL0 99 aa-0.73□□□□□ -2.53
CBX3P9-201ENST00000402326 DCHS1Q96JQ0 3298 aa-0.73□□□□□ -2.53
CBX3P9-201ENST00000402326 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.74□□□□□ -2.53
CBX3P9-201ENST00000402326 UGGT2Q9NYU1 1516 aa-0.74□□□□□ -2.53
CBX3P9-201ENST00000402326 ABCA9Q8IUA7 1624 aa-0.75□□□□□ -2.53
CBX3P9-201ENST00000402326 C3P01024 1663 aa-0.75□□□□□ -2.53
CBX3P9-201ENST00000402326 MT1GP13640 62 aa-0.75□□□□□ -2.53
CBX3P9-201ENST00000402326 C6orf48Q9UBA6 75 aa-0.75□□□□□ -2.53
CBX3P9-201ENST00000402326 WDFY4Q6ZS81 3184 aa-0.75□□□□□ -2.53
CBX3P9-201ENST00000402326 ABCC6O95255 1503 aa-0.75□□□□□ -2.53
CBX3P9-201ENST00000402326 CFAP54Q96N23 3096 aa-0.75□□□□□ -2.53
CBX3P9-201ENST00000402326 SFTA3P0C7M3 94 aa-0.76□□□□□ -2.53
CBX3P9-201ENST00000402326 FCER1GP30273 86 aa-0.76□□□□□ -2.53
CBX3P9-201ENST00000402326 DEFB114Q30KQ6 69 aa-0.76□□□□□ -2.53
CBX3P9-201ENST00000402326 GNG13Q9P2W3 67 aa-0.76□□□□□ -2.53
CBX3P9-201ENST00000402326 VPS13CQ709C8 3753 aa-0.77□□□□□ -2.53
CBX3P9-201ENST00000402326 FRYLO94915 3013 aa-0.77□□□□□ -2.53
CBX3P9-201ENST00000402326 IGLV5-48A0A075B6I7 105 aa-0.77□□□□□ -2.53
CBX3P9-201ENST00000402326 DNMBPQ6XZF7 1577 aa-0.78□□□□□ -2.53
CBX3P9-201ENST00000402326 ASXL1Q8IXJ9 1541 aa-0.78□□□□□ -2.53
CBX3P9-201ENST00000402326 DUOX2Q9NRD8 1548 aa-0.78□□□□□ -2.53
CBX3P9-201ENST00000402326 VCANP13611 3396 aa-0.78□□□□□ -2.53
CBX3P9-201ENST00000402326 SMR3BP02814 79 aaPredicted RBP-0.78□□□□□ -2.53
CBX3P9-201ENST00000402326 MT1FP04733 61 aa-0.78□□□□□ -2.53
CBX3P9-201ENST00000402326 KRTAP19-5Q3LI72 72 aa-0.78□□□□□ -2.53
CBX3P9-201ENST00000402326 UNC80Q8N2C7 3258 aa-0.78□□□□□ -2.53
CBX3P9-201ENST00000402326 MROH1Q8NDA8 1641 aa-0.78□□□□□ -2.54
CBX3P9-201ENST00000402326 MKI67P46013 3256 aaKnown RBP-0.79□□□□□ -2.54
CBX3P9-201ENST00000402326 LY75O60449 1722 aa-0.79□□□□□ -2.54
CBX3P9-201ENST00000402326 DNAH14Q0VDD8 3507 aa-0.79□□□□□ -2.54
CBX3P9-201ENST00000402326 SZT2Q5T011 3432 aa-0.79□□□□□ -2.54
CBX3P9-201ENST00000402326 RANBP2P49792 3224 aaKnown RBP-0.79□□□□□ -2.54
CBX3P9-201ENST00000402326 USP34Q70CQ2 3546 aa-0.8□□□□□ -2.54
CBX3P9-201ENST00000402326 SMCO4Q9NRQ5 59 aa-0.8□□□□□ -2.54
CBX3P9-201ENST00000402326 CEP250Q9BV73 2442 aa-0.8□□□□□ -2.54
CBX3P9-201ENST00000402326 MMP24-AS1A0A0U1RRL7 71 aa-0.81□□□□□ -2.54
CBX3P9-201ENST00000402326 H3BUA1 57 aa-0.81□□□□□ -2.54
CBX3P9-201ENST00000402326 MT1EP04732 61 aa-0.81□□□□□ -2.54
CBX3P9-201ENST00000402326 MT1LQ93083 61 aa-0.81□□□□□ -2.54
CBX3P9-201ENST00000402326 DNAH12Q6ZR08 3092 aa-0.81□□□□□ -2.54
CBX3P9-201ENST00000402326 SCRIBQ14160 1630 aa-0.82□□□□□ -2.54
CBX3P9-201ENST00000402326 WDFY3Q8IZQ1 3526 aa-0.82□□□□□ -2.54
CBX3P9-201ENST00000402326 PDCD5O14737 125 aa-0.83□□□□□ -2.54
CBX3P9-201ENST00000402326 TNP1P09430 55 aa-0.83□□□□□ -2.54
CBX3P9-201ENST00000402326 RPS29P62273 56 aaKnown RBP-0.83□□□□□ -2.54
CBX3P9-201ENST00000402326 MUC3AQ02505 3323 aa-0.84□□□□□ -2.54
CBX3P9-201ENST00000402326 CFAP47Q6ZTR5 3102 aa-0.84□□□□□ -2.54
CBX3P9-201ENST00000402326 LINC01549A6NIU2 74 aa-0.84□□□□□ -2.54
CBX3P9-201ENST00000402326 CLASP1Q7Z460 1538 aa-0.84□□□□□ -2.54
CBX3P9-201ENST00000402326 MADDQ8WXG6 1647 aa-0.85□□□□□ -2.55
CBX3P9-201ENST00000402326 NOP10Q9NPE3 64 aaKnown RBP-0.85□□□□□ -2.55
CBX3P9-201ENST00000402326 CDC42BPAQ5VT25 1732 aa-0.86□□□□□ -2.55
CBX3P9-201ENST00000402326 DEFB4AO15263 64 aa-0.86□□□□□ -2.55
CBX3P9-201ENST00000402326 CLPSL2Q6UWE3 100 aa-0.86□□□□□ -2.55
CBX3P9-201ENST00000402326 CROCC2H7BZ55 1655 aa-0.88□□□□□ -2.55
CBX3P9-201ENST00000402326 PCNTO95613 3336 aa-0.88□□□□□ -2.55
CBX3P9-201ENST00000402326 TIAM1Q13009 1591 aa-0.88□□□□□ -2.55
CBX3P9-201ENST00000402326 M0R1W7 72 aa-0.89□□□□□ -2.55
CBX3P9-201ENST00000402326 MAST1Q9Y2H9 1570 aa-0.89□□□□□ -2.55
CBX3P9-201ENST00000402326 K7EMI3 77 aa-0.91□□□□□ -2.56
CBX3P9-201ENST00000402326 CENPFP49454 3210 aa-0.91□□□□□ -2.56
CBX3P9-201ENST00000402326 GLI2P10070 1586 aa-0.91□□□□□ -2.56
CBX3P9-201ENST00000402326 ABCA6Q8N139 1617 aa-0.93□□□□□ -2.56
CBX3P9-201ENST00000402326 EFCAB5A4FU69 1503 aa-0.93□□□□□ -2.56
CBX3P9-201ENST00000402326 CDH23Q9H251 3354 aa-0.93□□□□□ -2.56
CBX3P9-201ENST00000402326 M0QY20 66 aa-0.93□□□□□ -2.56
CBX3P9-201ENST00000402326 A0A1B0GUL6 1792 aa-0.93□□□□□ -2.56
CBX3P9-201ENST00000402326 ABRACLQ9P1F3 81 aa-0.95□□□□□ -2.56
CBX3P9-201ENST00000402326 KAAG1Q9UBP8 84 aa-0.95□□□□□ -2.56
CBX3P9-201ENST00000402326 CCDC180Q9P1Z9 1646 aa-0.96□□□□□ -2.56
CBX3P9-201ENST00000402326 EEA1Q15075 1411 aa-0.96□□□□□ -2.56
CBX3P9-201ENST00000402326 ALS2Q96Q42 1657 aa-0.96□□□□□ -2.56
CBX3P9-201ENST00000402326 LINC00308Q8TCZ7 52 aa-0.96□□□□□ -2.56
CBX3P9-201ENST00000402326 BRCA2P51587 3418 aa-0.96□□□□□ -2.56
CBX3P9-201ENST00000402326 M0QZ58 72 aa-0.98□□□□□ -2.57
CBX3P9-201ENST00000402326 SERF2P84101 59 aa-0.98□□□□□ -2.57
CBX3P9-201ENST00000402326 NMES1Q9C002 83 aa-0.98□□□□□ -2.57
CBX3P9-201ENST00000402326 TMEM167BQ9NRX6 74 aa-0.98□□□□□ -2.57
CBX3P9-201ENST00000402326 FAM208AQ9UK61 1670 aaKnown RBP-0.98□□□□□ -2.57
CBX3P9-201ENST00000402326 ASPMQ8IZT6 3477 aa-0.99□□□□□ -2.57
CBX3P9-201ENST00000402326 DEFB136Q30KP8 78 aa-0.99□□□□□ -2.57
CBX3P9-201ENST00000402326 VPS13AQ96RL7 3174 aa-0.99□□□□□ -2.57
CBX3P9-201ENST00000402326 LINC01546A6NGU7 62 aa-1□□□□□ -2.57
CBX3P9-201ENST00000402326 IGIPA6NJ69 53 aa-1□□□□□ -2.57
CBX3P9-201ENST00000402326 TTTY10Q9BZA0 68 aa-1□□□□□ -2.57
CBX3P9-201ENST00000402326 A8MTW9 85 aa-1.01□□□□□ -2.57
CBX3P9-201ENST00000402326 EFCAB6Q5THR3 1501 aa-1.01□□□□□ -2.57
CBX3P9-201ENST00000402326 UGGT1Q9NYU2 1555 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms